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Volumn 10, Issue , 2009, Pages

Identification of ColR binding consensus and prediction of regulon of ColRS two-component system

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; DIACYLGLYCEROL KINASE; DIACYLGLYCEROL KINASE A; LACTOYLGLUTATHIONE LYASE; METHYLTRANSFERASE; OUTER MEMBRANE PROTEIN; OUTER MEMBRANE PROTEIN Q; PROTEIN COLR; UNCLASSIFIED DRUG; PROTEIN KINASE;

EID: 66749182726     PISSN: None     EISSN: 14712199     Source Type: Journal    
DOI: 10.1186/1471-2199-10-46     Document Type: Article
Times cited : (12)

References (28)
  • 1
    • 0033791468 scopus 로고    scopus 로고
    • Two-component signal transduction
    • 10.1146/annurev.biochem.69.1.183 10966457
    • Stock AM Robinson VL Goudreau PN Two-component signal transduction Annu Rev Biochem 2000, 69:183-215. 10.1146/annurev.biochem.69.1.183 10966457
    • (2000) Annu Rev Biochem , vol.69 , pp. 183-215
    • Stock, A.M.1    Robinson, V.L.2    Goudreau, P.N.3
  • 2
    • 33845640610 scopus 로고    scopus 로고
    • Stimulus perception in bacterial signal-transducing histidine kinases
    • 1698512 10.1128/MMBR.00020-06
    • Mascher T Helmann JD Unden G Stimulus perception in bacterial signal-transducing histidine kinases Microbiol Mol Biol Rev 2006, 70(4):910-938. 1698512 17158704 10.1128/MMBR.00020-06
    • (2006) Microbiol Mol Biol Rev , vol.70 , Issue.4 , pp. 910-938
    • Mascher, T.1    Helmann, J.D.2    Unden, G.3
  • 3
    • 0033887436 scopus 로고    scopus 로고
    • A tale of two components: A novel kinase and a regulatory switch
    • 10.1038/77915 10932244
    • Robinson VL Buckler DR Stock AM A tale of two components: A novel kinase and a regulatory switch Nat Struct Biol 2000, 7(8):626-633. 10.1038/ 77915 10932244
    • (2000) Nat Struct Biol , vol.7 , Issue.8 , pp. 626-633
    • Robinson, V.L.1    Buckler, D.R.2    Stock, A.M.3
  • 4
    • 0034329572 scopus 로고    scopus 로고
    • Two-component systems in Pseudomonas aeruginosa: Why so many?
    • 10.1016/S0966-842X(00)01833-3 11121759
    • Rodrigue A Quentin Y Lazdunski A Mejean V Foglino M Two-component systems in Pseudomonas aeruginosa: Why so many? Trends Microbiol 2000, 8(11):498-504. 10.1016/S0966-842X(00)01833-3 11121759
    • (2000) Trends Microbiol , vol.8 , Issue.11 , pp. 498-504
    • Rodrigue, A.1    Quentin, Y.2    Lazdunski, A.3    Mejean, V.4    Foglino, M.5
  • 6
    • 0031894034 scopus 로고    scopus 로고
    • A two-component system plays an important role in the root-colonizing ability of Pseudomonas fluorescens strain WCS365
    • 10.1094/MPMI.1998.11.1.45 9425686
    • Dekkers LC Bloemendaal CJ de Weger LA Wijffelman CA Spaink HP Lugtenberg BJ A two-component system plays an important role in the root-colonizing ability of Pseudomonas fluorescens strain WCS365 Mol Plant Microbe Interact 1998, 11(1):45-56. 10.1094/MPMI.1998.11.1.45 9425686
    • (1998) Mol Plant Microbe Interact , vol.11 , Issue.1 , pp. 45-56
    • Dekkers, L.C.1    Bloemendaal, C.J.2    de Weger, L.A.3    Wijffelman, C.A.4    Spaink, H.P.5    Lugtenberg, B.J.6
  • 7
    • 7644220468 scopus 로고    scopus 로고
    • The ColR-ColS two-component signal transduction system is involved in regulation of Tn4652 transposition in Pseudomonas putida under starvation conditions
    • 10.1111/j.1365-2958.2004.04311.x 15491368
    • Hõrak R Ilves H Pruunsild P Kuljus M Kivisaar M The ColR-ColS two-component signal transduction system is involved in regulation of Tn4652 transposition in Pseudomonas putida under starvation conditions Mol Microbiol 2004, 54(3):795-807. 10.1111/j.1365-2958.2004.04311.x 15491368
    • (2004) Mol Microbiol , vol.54 , Issue.3 , pp. 795-807
    • Hõrak, R.1    Ilves, H.2    Pruunsild, P.3    Kuljus, M.4    Kivisaar, M.5
  • 8
    • 33751573880 scopus 로고    scopus 로고
    • The ColRS two-component system regulates membrane functions and protects Pseudomonas putida against phenol
    • 1698186 10.1128/JB.01262-06
    • Kivistik PA Putrinš M Püvi K Ilves H Kivisaar M Hõrak R The ColRS two-component system regulates membrane functions and protects Pseudomonas putida against phenol J Bacteriol 2006, 188(23):8109-8117. 1698186 17012397 10.1128/JB.01262-06
    • (2006) J Bacteriol , vol.188 , Issue.23 , pp. 8109-8117
    • Kivistik, P.A.1    Putrinš, M.2    Püvi, K.3    Ilves, H.4    Kivisaar, M.5    Hõrak, R.6
  • 9
    • 51649083979 scopus 로고    scopus 로고
    • ColRS two-component system prevents lysis of subpopulation of glucose-grown Pseudomonas putida
    • 10.1111/j.1462-2920.2008.01705.x 18657172
    • Putrinš M Ilves H Kivisaar M Hõrak R ColRS two-component system prevents lysis of subpopulation of glucose-grown Pseudomonas putida Environ Microbiol 2008, 10(10):2886-2893. 10.1111/ j.1462-2920.2008.01705.x 18657172
    • (2008) Environ Microbiol , vol.10 , Issue.10 , pp. 2886-2893
    • Putrinš, M.1    Ilves, H.2    Kivisaar, M.3    Hõrak, R.4
  • 10
    • 33846087349 scopus 로고    scopus 로고
    • Key genes involved in heavy-metal resistance in Pseudomonas putida CD2
    • 10.1111/j.1574-6968.2006.00505.x 17166231
    • Hu N Zhao B Key genes involved in heavy-metal resistance in Pseudomonas putida CD2 FEMS Microbiol Lett 2007, 267(1):17-22. 10.1111/ j.1574-6968.2006.00505.x 17166231
    • (2007) FEMS Microbiol Lett , vol.267 , Issue.1 , pp. 17-22
    • Hu, N.1    Zhao, B.2
  • 11
    • 33750065679 scopus 로고    scopus 로고
    • The two-component colR/S system of Pseudomonas fluorescens WCS365 plays a role in rhizosphere competence through maintaining the structure and function of the outer membrane
    • 10.1111/j.1574-6941.2006.00158.x 17064262
    • de Weert S Dekkers LC Bitter W Tuinman S Wijfjes AH van Boxtel R Lugtenberg BJ The two-component colR/S system of Pseudomonas fluorescens WCS365 plays a role in rhizosphere competence through maintaining the structure and function of the outer membrane FEMS Microbiol Ecol 2006, 58(2):205-213. 10.1111/j.1574-6941.2006.00158.x 17064262
    • (2006) FEMS Microbiol Ecol , vol.58 , Issue.2 , pp. 205-213
    • de Weert, S.1    Dekkers, L.C.2    Bitter, W.3    Tuinman, S.4    Wijfjes, A.H.5    van Boxtel, R.6    Lugtenberg, B.J.7
  • 13
    • 3242879355 scopus 로고    scopus 로고
    • PredictRegulon: A web server for the prediction of the regulatory protein binding sites and operons in prokaryote genomes
    • (Web Server) 441502 15215402 10.1093/nar/gkh364
    • Yellaboina S Seshadri J Kumar MS Ranjan A PredictRegulon: A web server for the prediction of the regulatory protein binding sites and operons in prokaryote genomes Nucleic Acids Res 2004, 32(Web Server):W318-320. 441502 15215402 10.1093/nar/gkh364
    • (2004) Nucleic Acids Res
    • Yellaboina, S.1    Seshadri, J.2    Kumar, M.S.3    Ranjan, A.4
  • 15
    • 27944453600 scopus 로고    scopus 로고
    • Virtual Footprint and PRODORIC: An integrative framework for regulon prediction in prokaryotes
    • 10.1093/bioinformatics/bti635 16109747
    • Münch R Hiller K Grote A Scheer M Klein J Schobert M Jahn D Virtual Footprint and PRODORIC: An integrative framework for regulon prediction in prokaryotes Bioinformatics 2005, 21(22):4187-4189. 10.1093/ bioinformatics/bti635 16109747
    • (2005) Bioinformatics , vol.21 , Issue.22 , pp. 4187-4189
    • Münch, R.1    Hiller, K.2    Grote, A.3    Scheer, M.4    Klein, J.5    Schobert, M.6    Jahn, D.7
  • 17
    • 51649111882 scopus 로고    scopus 로고
    • The identification of response regulator-specific binding sites reveals new roles of two-component systems in Bacillus cereus and closely related low-GC Gram-positives
    • 10.1111/j.1462-2920.2008.01700.x 18662309
    • de Been M Bart MJ Abee T Siezen RJ Francke C The identification of response regulator-specific binding sites reveals new roles of two-component systems in Bacillus cereus and closely related low-GC Gram-positives Environ Microbiol 2008, 10(10):2796-2809. 10.1111/ j.1462-2920.2008.01700.x 18662309
    • (2008) Environ Microbiol , vol.10 , Issue.10 , pp. 2796-2809
    • de Been, M.1    Bart, M.J.2    Abee, T.3    Siezen, R.J.4    Francke, C.5
  • 18
    • 0035937824 scopus 로고    scopus 로고
    • A PhoP/PhoQ-induced Lipase (PagL) that catalyzes 3-O-deacylation of lipid A precursors in membranes of Salmonella typhimurium
    • 10.1074/jbc.M010730200 11108722
    • Trent MS Pabich W Raetz CR Miller SI A PhoP/PhoQ-induced Lipase (PagL) that catalyzes 3-O-deacylation of lipid A precursors in membranes of Salmonella typhimurium J Biol Chem 2001, 276(12):9083-9092. 10.1074/ jbc.M010730200 11108722
    • (2001) J Biol Chem , vol.276 , Issue.12 , pp. 9083-9092
    • Trent, M.S.1    Pabich, W.2    Raetz, C.R.3    Miller, S.I.4
  • 20
    • 34347387346 scopus 로고    scopus 로고
    • Release of the lipopolysaccharide deacylase PagL from latency compensates for a lack of lipopolysaccharide aminoarabinose modification-dependent resistance to the antimicrobial peptide polymyxin B in Salmonella enterica
    • 1913436 10.1128/JB.00451-07
    • Kawasaki K China K Nishijima M Release of the lipopolysaccharide deacylase PagL from latency compensates for a lack of lipopolysaccharide aminoarabinose modification-dependent resistance to the antimicrobial peptide polymyxin B in Salmonella enterica J Bacteriol 2007, 189(13):4911-4919. 1913436 17483225 10.1128/JB.00451-07
    • (2007) J Bacteriol , vol.189 , Issue.13 , pp. 4911-4919
    • Kawasaki, K.1    China, K.2    Nishijima, M.3
  • 21
    • 2442544458 scopus 로고    scopus 로고
    • 3-O-deacylation of lipid A by PagL, a PhoP/PhoQ-regulated deacylase of Salmonella typhimurium, modulates signaling through Toll-like receptor 4
    • 10.1074/jbc.M401275200 15014080
    • Kawasaki K Ernst RK Miller SI 3-O-deacylation of lipid A by PagL, a PhoP/ PhoQ-regulated deacylase of Salmonella typhimurium, modulates signaling through Toll-like receptor 4 J Biol Chem 2004, 279(19):20044-20048. 10.1074/jbc.M401275200 15014080
    • (2004) J Biol Chem , vol.279 , Issue.19 , pp. 20044-20048
    • Kawasaki, K.1    Ernst, R.K.2    Miller, S.I.3
  • 22
    • 39149115737 scopus 로고    scopus 로고
    • Membrane lipid homeostasis in bacteria
    • 10.1038/nrmicro1839
    • Zhang YM Rock CO Membrane lipid homeostasis in bacteria Nat Rev 2008, 6(3):222-233. 10.1038/nrmicro1839
    • (2008) Nat Rev , vol.6 , Issue.3 , pp. 222-233
    • Zhang, Y.M.1    Rock, C.O.2
  • 23
  • 24
    • 66749155959 scopus 로고    scopus 로고
    • J. Craig Venter Institute
    • J. Craig Venter Institute http://www.tigr.org
  • 26
    • 0004078614 scopus 로고
    • Interscience Publishers Inc., New York
    • Adams MH Bacteriophages Interscience Publishers Inc., New York 1959
    • (1959) Bacteriophages
    • Adams, M.H.1
  • 27
    • 0029665023 scopus 로고    scopus 로고
    • Preparation of electrocompetent E. coli using salt-free growth medium
    • 8770403
    • Sharma RC Schimke RT Preparation of electrocompetent E. coli using salt-free growth medium Biotechniques 1996, 20(1):42-44. 8770403
    • (1996) Biotechniques , vol.20 , Issue.1 , pp. 42-44
    • Sharma, R.C.1    Schimke, R.T.2
  • 28
    • 0034866160 scopus 로고    scopus 로고
    • Growth medium composition-determined regulatory mechanisms are superimposed on CatR-mediated transcription from the pheBA and catBCA promoters in Pseudomonas putida
    • 11495992
    • Tover A Ojangu EL Kivisaar M Growth medium composition-determined regulatory mechanisms are superimposed on CatR-mediated transcription from the pheBA and catBCA promoters in Pseudomonas putida Microbiology 2001, 147(Pt 8):2149-2156. 11495992
    • (2001) Microbiology , vol.147 , Issue.PART 8 , pp. 2149-2156
    • Tover, A.1    Ojangu, E.L.2    Kivisaar, M.3


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