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Volumn 25, Issue 6, 2009, Pages 243-247

Scaling laws in functional genome content across prokaryotic clades and lifestyles

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EID: 66449114096     PISSN: 01689525     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tig.2009.04.004     Document Type: Short Survey
Times cited : (53)

References (16)
  • 1
    • 20244376755 scopus 로고    scopus 로고
    • Comparative metagenomics of microbial communities
    • Tringe S.G., et al. Comparative metagenomics of microbial communities. Science 308 (2005) 554-557
    • (2005) Science , vol.308 , pp. 554-557
    • Tringe, S.G.1
  • 2
    • 41649109613 scopus 로고    scopus 로고
    • Functional metagenomic profiling of nine biomes
    • Dinsdale E.A. Functional metagenomic profiling of nine biomes. Nature 452 (2008) 629-632
    • (2008) Nature , vol.452 , pp. 629-632
    • Dinsdale, E.A.1
  • 3
    • 0041828241 scopus 로고    scopus 로고
    • Scaling laws in the functional content of genomes
    • van Nimwegen E. Scaling laws in the functional content of genomes. Trends Genet. 19 (2003) 479-484
    • (2003) Trends Genet. , vol.19 , pp. 479-484
    • van Nimwegen, E.1
  • 4
    • 1542327668 scopus 로고    scopus 로고
    • Trends between gene content and genome size in prokaryotic species with larger genomes
    • Konstantinidis K.T., and Tiedje J.M. Trends between gene content and genome size in prokaryotic species with larger genomes. Proc. Natl. Acad. Sci. U. S. A. 101 (2004) 3160-3165
    • (2004) Proc. Natl. Acad. Sci. U. S. A. , vol.101 , pp. 3160-3165
    • Konstantinidis, K.T.1    Tiedje, J.M.2
  • 5
    • 1042298811 scopus 로고    scopus 로고
    • Evolution of protein superfamilies and bacterial genome size
    • Ranea J.A., et al. Evolution of protein superfamilies and bacterial genome size. J. Mol. Biol. 336 (2004) 871-887
    • (2004) J. Mol. Biol. , vol.336 , pp. 871-887
    • Ranea, J.A.1
  • 6
    • 27244440541 scopus 로고    scopus 로고
    • Scaling laws in the functional content of genomes: fundamental constants of evolution?
    • Koonin E.V., et al. (Ed), Springer
    • van Nimwegen E. Scaling laws in the functional content of genomes: fundamental constants of evolution?. In: Koonin E.V., et al. (Ed). Power Laws, Scale-Free Networks and Genome Biology (2004), Springer 236-253
    • (2004) Power Laws, Scale-Free Networks and Genome Biology , pp. 236-253
    • van Nimwegen, E.1
  • 7
    • 33646113855 scopus 로고    scopus 로고
    • Evolutionary dynamics of prokaryotic transcriptional regulatory networks
    • Madan Babu M., et al. Evolutionary dynamics of prokaryotic transcriptional regulatory networks. J. Mol. Biol. 358 (2006) 614-633
    • (2006) J. Mol. Biol. , vol.358 , pp. 614-633
    • Madan Babu, M.1
  • 8
    • 57149085868 scopus 로고    scopus 로고
    • Genomics of bacteria and archaea: the emerging dynamic view of the prokaryotic world
    • Koonin E.V., and Wolf Y.I. Genomics of bacteria and archaea: the emerging dynamic view of the prokaryotic world. Nucleic Acids Res. 36 (2008) 6688-6719
    • (2008) Nucleic Acids Res. , vol.36 , pp. 6688-6719
    • Koonin, E.V.1    Wolf, Y.I.2
  • 9
    • 58149480391 scopus 로고    scopus 로고
    • The evolution of domain-content in bacterial genomes
    • Molina N., and van Nimwegen E. The evolution of domain-content in bacterial genomes. Biol. Direct 3 (2008) 51
    • (2008) Biol. Direct , vol.3 , pp. 51
    • Molina, N.1    van Nimwegen, E.2
  • 10
    • 34848924929 scopus 로고    scopus 로고
    • Large changes in regulome size herald the main prokaryotic lineages
    • Cordero O.X., and Hogeweg P. Large changes in regulome size herald the main prokaryotic lineages. Trends Genet. 23 (2007) 488-493
    • (2007) Trends Genet. , vol.23 , pp. 488-493
    • Cordero, O.X.1    Hogeweg, P.2
  • 11
    • 0030660581 scopus 로고    scopus 로고
    • A genomic perspective on protein families
    • Tatusov R.L., et al. A genomic perspective on protein families. Science 278 (1997) 631-637
    • (1997) Science , vol.278 , pp. 631-637
    • Tatusov, R.L.1
  • 12
    • 0042902833 scopus 로고    scopus 로고
    • The COG database: an updated version includes eukaryotes
    • Tatusov R.L., et al. The COG database: an updated version includes eukaryotes. BMC Bioinformatics 4 (2003) 41
    • (2003) BMC Bioinformatics , vol.4 , pp. 41
    • Tatusov, R.L.1
  • 13
    • 38049075677 scopus 로고    scopus 로고
    • Universal patterns of purifying selection at non-coding positions in bacteria
    • Molina N., and van Nimwegen E. Universal patterns of purifying selection at non-coding positions in bacteria. Genome Res. 18 (2007) 148-160
    • (2007) Genome Res. , vol.18 , pp. 148-160
    • Molina, N.1    van Nimwegen, E.2
  • 14
    • 38549146894 scopus 로고    scopus 로고
    • The Pfam protein families database
    • Finn R.D., et al. The Pfam protein families database. Nucleic Acids Res. 36 (2008) D281-D288
    • (2008) Nucleic Acids Res. , vol.36
    • Finn, R.D.1
  • 15
    • 0031743421 scopus 로고    scopus 로고
    • Profile hidden Markov models
    • Eddy S.R. Profile hidden Markov models. Bioinformatics 14 (1998) 755-763
    • (1998) Bioinformatics , vol.14 , pp. 755-763
    • Eddy, S.R.1
  • 16
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: tool for the unification of bioloy
    • Ashburner M., et al. Gene ontology: tool for the unification of bioloy. The Gene Ontology Consortium Nat. Genet. 25 (2000) 25-29
    • (2000) The Gene Ontology Consortium Nat. Genet. , vol.25 , pp. 25-29
    • Ashburner, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.