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Volumn 191, Issue 11, 2009, Pages 3712-3716

A role for single-stranded exonucleases in the use of DNA as a nutrient

Author keywords

[No Author keywords available]

Indexed keywords

EXODEOXYRIBONUCLEASE I; EXODEOXYRIBONUCLEASE VII; EXONUCLEASE; EXONUCLEASE X; RECJ PROTEIN; SINGLE STRANDED DNA; UNCLASSIFIED DRUG; ESCHERICHIA COLI PROTEIN;

EID: 66149124491     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.01678-08     Document Type: Article
Times cited : (14)

References (34)
  • 1
    • 0025766257 scopus 로고
    • Escherichia coli xonA (sbcB) mutants enhance illegitimate recombination
    • Allgood, N. D., and T. J. Silhavy. 1991. Escherichia coli xonA (sbcB) mutants enhance illegitimate recombination. Genetics 127:671-680.
    • (1991) Genetics , vol.127 , pp. 671-680
    • Allgood, N.D.1    Silhavy, T.J.2
  • 3
    • 0017595260 scopus 로고
    • Escherichia coli mutants deficient in exonuclease VII
    • Chase, J. W., and C. C. Richardson. 1977. Escherichia coli mutants deficient in exonuclease VII. J. Bacteriol. 129:934-947.
    • (1977) J. Bacteriol. , vol.129 , pp. 934-947
    • Chase, J.W.1    Richardson, C.C.2
  • 4
    • 0016166828 scopus 로고
    • Exonuclease VII of Escherichia coli. Mechanism of action
    • Chase, J. W., and C. C. Richardson. 1974. Exonuclease VII of Escherichia coli. Mechanism of action. J. Biol. Chem. 249:4553-4561.
    • (1974) J. Biol. Chem. , vol.249 , pp. 4553-4561
    • Chase, J.W.1    Richardson, C.C.2
  • 5
    • 0016258294 scopus 로고
    • Exonuclease VII of Escherichia coli. Purification and properties
    • Chase, J. W., and C. C. Richardson. 1974. Exonuclease VII of Escherichia coli. Purification and properties. J. Biol. Chem. 249:4545-4552.
    • (1974) J. Biol. Chem. , vol.249 , pp. 4545-4552
    • Chase, J.W.1    Richardson, C.C.2
  • 6
    • 0242360953 scopus 로고    scopus 로고
    • DNA transport during transformation
    • Chen, I., and D. Dubnau. 2003. DNA transport during transformation. Front. Biosci. 8:s544-s556.
    • (2003) Front. Biosci. , vol.8
    • Chen, I.1    Dubnau, D.2
  • 7
    • 3042596928 scopus 로고    scopus 로고
    • DNA uptake during bacterial transformation
    • Chen, I., and D. Dubnau. 2004. DNA uptake during bacterial transformation. Nat. Rev. Microbiol. 2:241-249.
    • (2004) Nat. Rev. Microbiol. , vol.2 , pp. 241-249
    • Chen, I.1    Dubnau, D.2
  • 8
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko, K. A., and B. L. Wanner. 2000. One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc. Natl. Acad. Sci. USA 97:6640-6645.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 9
    • 0032697140 scopus 로고    scopus 로고
    • DNA uptake in bacteria
    • Dubnau, D. 1999. DNA uptake in bacteria. Annu. Rev. Microbiol. 53:217-244.
    • (1999) Annu. Rev. Microbiol. , vol.53 , pp. 217-244
    • Dubnau, D.1
  • 10
    • 0344235402 scopus 로고    scopus 로고
    • The growth advantage in stationaryphase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment
    • Farrell, M. J., and S. E. Finkel. 2003. The growth advantage in stationaryphase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment. J. Bacteriol. 185:7044-7052.
    • (2003) J. Bacteriol. , vol.185 , pp. 7044-7052
    • Farrell, M.J.1    Finkel, S.E.2
  • 11
    • 0037417799 scopus 로고    scopus 로고
    • Stabilization of perfect and imperfect tandem repeats by single-strand DNA exonucleases
    • Feschenko, V. V., L. A. Rajman, and S. T. Lovett. 2003. Stabilization of perfect and imperfect tandem repeats by single-strand DNA exonucleases. Proc. Natl. Acad. Sci. USA 100:1134-1139.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 1134-1139
    • Feschenko, V.V.1    Rajman, L.A.2    Lovett, S.T.3
  • 12
    • 31544474634 scopus 로고    scopus 로고
    • Long-term survival during stationary phase: Evolution and the GASP phenotype
    • Finkel, S. E. 2006. Long-term survival during stationary phase: evolution and the GASP phenotype. Nat. Rev. Microbiol. 4:113-120.
    • (2006) Nat. Rev. Microbiol. , vol.4 , pp. 113-120
    • Finkel, S.E.1
  • 13
    • 0035685198 scopus 로고    scopus 로고
    • DNA as a nutrient: Novel role for bacterial competence gene homologs
    • DOI 10.1128/JB.183.21.6288-6293.2001
    • Finkel, S. E., and R. Kolter. 2001. DNA as a nutrient: novel role for bacterial competence gene homologs. J. Bacteriol. 183:6288-6293. (Pubitemid 34059401)
    • (2001) Journal of Bacteriology , vol.183 , Issue.21 , pp. 6288-6293
    • Finkel, S.E.1    Kolter, R.2
  • 14
    • 0033616769 scopus 로고    scopus 로고
    • Evolution of microbial diversity during prolonged starvation
    • Finkel, S. E., and R. Kolter. 1999. Evolution of microbial diversity during prolonged starvation. Proc. Natl. Acad. Sci. USA 96:4023-4027.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 4023-4027
    • Finkel, S.E.1    Kolter, R.2
  • 16
    • 0031905790 scopus 로고    scopus 로고
    • Mismatch repair in Escherichia coli cells lacking single-strand exonucleases ExoI, ExoVII, and RecJ
    • Harris, R. S., K. J. Ross, M. J. Lombardo, and S. M. Rosenberg. 1998. Mismatch repair in Escherichia coli cells lacking single-strand exonucleases ExoI, ExoVII, and RecJ. J. Bacteriol. 180:989-993.
    • (1998) J. Bacteriol. , vol.180 , pp. 989-993
    • Harris, R.S.1    Ross, K.J.2    Lombardo, M.J.3    Rosenberg, S.M.4
  • 17
    • 34547623364 scopus 로고    scopus 로고
    • Molecular interactions of Escherichia coli ExoIX and identification of its associated 3′-5′ exonuclease activity
    • Hodskinson, M. R., L. M. Allen, D. P. Thomson, and J. R. Sayers. 2007. Molecular interactions of Escherichia coli ExoIX and identification of its associated 3′-5′ exonuclease activity. Nucleic Acids Res. 35:4094-4102.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 4094-4102
    • Hodskinson, M.R.1    Allen, L.M.2    Thomson, D.P.3    Sayers, J.R.4
  • 18
    • 33646872909 scopus 로고    scopus 로고
    • DNA mismatch repair system. Classical and fresh roles
    • Jun, S. H., T. G. Kim, and C. Ban. 2006. DNA mismatch repair system. Classical and fresh roles. FEBS J. 273:1609-1619.
    • (2006) FEBS J. , vol.273 , pp. 1609-1619
    • Jun, S.H.1    Kim, T.G.2    Ban, C.3
  • 19
    • 61449240093 scopus 로고    scopus 로고
    • Adaptive evolution in single species bacterial biofilms
    • Kraigsley, A. M., and S. E. Finkel. 2009. Adaptive evolution in single species bacterial biofilms. FEMS Microbiol. Lett. 293:135-140.
    • (2009) FEMS Microbiol. Lett. , vol.293 , pp. 135-140
    • Kraigsley, A.M.1    Finkel, S.E.2
  • 20
    • 0001063349 scopus 로고
    • The deoxyribonucleases of Escherichia coli. V. on the specificity of exonuclease I (phosphodiesterase)
    • Lehman, I. R., and A. L. Nussbaum. 1964. The deoxyribonucleases of Escherichia coli. V. On the specificity of exonuclease I (phosphodiesterase). J. Biol. Chem. 239:2628-2636.
    • (1964) J. Biol. Chem. , Issue.239 , pp. 2628-2636
    • Lehman, I.R.1    Nussbaum, A.L.2
  • 21
    • 0021334513 scopus 로고
    • Genetic analysis of the recJ gene of Escherichia coli K-12
    • Lovett, S. T., and A. J. Clark. 1984. Genetic analysis of the recJ gene of Escherichia coli K-12. J. Bacteriol. 157:190-196.
    • (1984) J. Bacteriol. , vol.157 , pp. 190-196
    • Lovett, S.T.1    Clark, A.J.2
  • 22
    • 0345587483 scopus 로고
    • Identification and purification of a single-stranded-DNA-specific exonuclease encoded by the recJ gene of Escherichia coli
    • DOI 10.1073/pnas.86.8.2627
    • Lovett, S. T., and R. Kolodner. 1989. Identification and purification of a single-stranded-DNA-specific exonuclease encoded by the recJ gene of Escherichia coli. Proc. Natl. Acad. Sci. USA 86:2627-2631. (Pubitemid 19112600)
    • (1989) Proceedings of the National Academy of Sciences of the United States of America , vol.86 , Issue.8 , pp. 2627-2631
    • Lovett, S.T.1    Kolodner, R.D.2
  • 23
    • 48249095036 scopus 로고    scopus 로고
    • Structural basis of Escherichia coli singlestranded DNA-binding protein stimulation of exonuclease I
    • Lu, D., and J. L. Keck. 2008. Structural basis of Escherichia coli singlestranded DNA-binding protein stimulation of exonuclease I. Proc. Natl. Acad. Sci. USA 105:9169-9174.
    • (2008) Proc. Natl. Acad. Sci. USA , vol.105 , pp. 9169-9174
    • Lu, D.1    Keck, J.L.2
  • 24
    • 0003842951 scopus 로고
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • Miller, J. H. 1992. A short course in bacterial genetics. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1992) A Short Course in Bacterial Genetics
    • Miller, J.H.1
  • 25
    • 33744722488 scopus 로고    scopus 로고
    • Escherichia coli competence gene homologs are essential for competitive fitness and the use of DNA as a nutrient
    • Palchevskiy, V., and S. E. Finkel. 2006. Escherichia coli competence gene homologs are essential for competitive fitness and the use of DNA as a nutrient. J. Bacteriol. 188:3902-3910.
    • (2006) J. Bacteriol. , vol.188 , pp. 3902-3910
    • Palchevskiy, V.1    Finkel, S.E.2
  • 26
    • 85010253669 scopus 로고
    • The genetic control and cytoplasmic expression of " inducibility" in the synthesis of beta-galactosidase in E. coli
    • Pardee, A. B., F. Jacob, and J. Monod. 1959. The genetic control and cytoplasmic expression of "inducibility" in the synthesis of beta-galactosidase in E. coli. J. Mol. Biol. 1:165-178.
    • (1959) J. Mol. Biol. , vol.1 , pp. 165-178
    • Pardee, A.B.1    Jacob, F.2    Monod, J.3
  • 27
    • 0026669836 scopus 로고
    • DNA deoxyribophosphodiesterase of Escherichia coli is associated with exonuclease I
    • Sandigursky, M., and W. A. Franklin. 1992. DNA deoxyribophosphodiesterase of Escherichia coli is associated with exonuclease I. Nucleic Acids Res. 20:4699-4703.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 4699-4703
    • Sandigursky, M.1    Franklin, W.A.2
  • 29
    • 0022526190 scopus 로고
    • The biology of natural transformation
    • Stewart, G. J., and C. A. Carlson. 1986. The biology of natural transformation. Annu. Rev. Microbiol. 40:211-235.
    • (1986) Annu. Rev. Microbiol. , vol.40 , pp. 211-235
    • Stewart, G.J.1    Carlson, C.A.2
  • 30
    • 0031862023 scopus 로고    scopus 로고
    • Single-strand DNA-specific exonucleases in Escherichia coli. Roles in repair and mutation avoidance
    • Viswanathan, M., and S. T. Lovett. 1998. Single-strand DNA-specific exonucleases in Escherichia coli. Roles in repair and mutation avoidance. Genetics 149:7-16.
    • (1998) Genetics , vol.149 , pp. 7-16
    • Viswanathan, M.1    Lovett, S.T.2
  • 31
    • 0033570183 scopus 로고    scopus 로고
    • Exonuclease X of Escherichia coli. a novel 3′-5′ DNase and DnaQ superfamily member involved in DNA repair
    • Viswanathan, M., and S. T. Lovett. 1999. Exonuclease X of Escherichia coli. A novel 3′-5′ DNase and DnaQ superfamily member involved in DNA repair. J. Biol. Chem. 274:30094-30100.
    • (1999) J. Biol. Chem. , vol.274 , pp. 30094-30100
    • Viswanathan, M.1    Lovett, S.T.2
  • 32
    • 0035903140 scopus 로고    scopus 로고
    • Redundant exonuclease involvement in Escherichia coli methyl-directed mismatch repair
    • Viswanathan, M., V. Burdett, C. Baitinger, P. Modrich, and S. T. Lovett. 2001. Redundant exonuclease involvement in Escherichia coli methyl-directed mismatch repair. J. Biol. Chem. 276:31053-31058.
    • (2001) J. Biol. Chem. , vol.276 , pp. 31053-31058
    • Viswanathan, M.1    Burdett, V.2    Baitinger, C.3    Modrich, P.4    Lovett, S.T.5
  • 33
    • 0034005003 scopus 로고    scopus 로고
    • Control of genetic stability in Escherichia coli: The SbcB 3′-5′ exonuclease suppresses illegitimate recombination promoted by the RecE 5′-3′ exonuclease
    • Yamaguchi, H., K. Hanada, Y. Asami, J. I. Kato, and H. Ikeda. 2000. Control of genetic stability in Escherichia coli: the SbcB 3′-5′ exonuclease suppresses illegitimate recombination promoted by the RecE 5′-3′ exonuclease. Genes Cells 5:101-109.
    • (2000) Genes Cells , vol.5 , pp. 101-109
    • Yamaguchi, H.1    Hanada, K.2    Asami, Y.3    Kato, J.I.4    Ikeda, H.5
  • 34
    • 0027510647 scopus 로고
    • Microbial competition: Escherichia coli mutants that take over stationary phase cultures
    • Zambrano, M. M., D. A. Siegele, M. Almiron, A. Tormo, and R. Kolter. 1993. Microbial competition: Escherichia coli mutants that take over stationary phase cultures. Science 259:1757-1760.
    • (1993) Science , vol.259 , pp. 1757-1760
    • Zambrano, M.M.1    Siegele, D.A.2    Almiron, M.3    Tormo, A.4    Kolter, R.5


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