메뉴 건너뛰기




Volumn 220, Issue 1, 2009, Pages 34-44

Periodic oscillation in delayed gene networks with SUM regulatory logic and small perturbations

Author keywords

Distributed delay; Gene network; Periodic oscillation

Indexed keywords

BIO-MOLECULAR; CELLULAR LEVELS; DISTRIBUTED DELAY; GENE NETWORK; GENE NETWORKS; GLOBAL STABILITY; HILL FUNCTION; MATRIX ANALYSIS; MODEL TRANSFORMS; PERIODIC OSCILLATION; SMALL PERTURBATIONS; WEAK COUPLINGS;

EID: 66049140794     PISSN: 00255564     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mbs.2009.03.010     Document Type: Article
Times cited : (29)

References (38)
  • 1
    • 0033725197 scopus 로고    scopus 로고
    • Mathematical modeling of gene networks
    • Smolen P., Baxter D.A., and Byrne J.H. Mathematical modeling of gene networks. Neuron 26 3 (2000) 567-580
    • (2000) Neuron , vol.26 , Issue.3 , pp. 567-580
    • Smolen, P.1    Baxter, D.A.2    Byrne, J.H.3
  • 2
    • 0033782304 scopus 로고    scopus 로고
    • Modeling transcriptional control in Gene Networks methods, recent results, and future directions
    • Smolen P., Baxter D.A., and Byrne J.H. Modeling transcriptional control in Gene Networks methods, recent results, and future directions. Bulletin of Mathematical Biology 62 (2000) 247-292
    • (2000) Bulletin of Mathematical Biology , vol.62 , pp. 247-292
    • Smolen, P.1    Baxter, D.A.2    Byrne, J.H.3
  • 3
    • 0034688173 scopus 로고    scopus 로고
    • A synthetic oscillatory network of transcriptional regulators
    • Elowitz M.B., and Leibler S. A synthetic oscillatory network of transcriptional regulators. Nature 403 (2000) 335-338
    • (2000) Nature , vol.403 , pp. 335-338
    • Elowitz, M.B.1    Leibler, S.2
  • 4
    • 0034688174 scopus 로고    scopus 로고
    • Construction of a genetic toggle switch in Escherichia Coli
    • Gardner T.S., Cantor C.R., and Collins J.J. Construction of a genetic toggle switch in Escherichia Coli. Nature 403 (2000) 339-342
    • (2000) Nature , vol.403 , pp. 339-342
    • Gardner, T.S.1    Cantor, C.R.2    Collins, J.J.3
  • 5
    • 0037154293 scopus 로고    scopus 로고
    • Synchronizing genetic relaxation oscillators by intercell signaling
    • D. McMillen, N. Kopell, J. Hasty, and J. Collins, Synchronizing genetic relaxation oscillators by intercell signaling, Natl. Acad. Sci., U.S.A., 99 (2002) 679-684.
    • (2002) Natl. Acad. Sci., U.S.A , vol.99 , pp. 679-684
    • McMillen, D.1    Kopell, N.2    Hasty, J.3    Collins, J.4
  • 6
    • 18444389980 scopus 로고    scopus 로고
    • Synchronizing genetic oscillators by signaling molecules
    • Wang R., and Chen L. Synchronizing genetic oscillators by signaling molecules. J Biol Rhythms 20 (2005) 257-269
    • (2005) J Biol Rhythms , vol.20 , pp. 257-269
    • Wang, R.1    Chen, L.2
  • 7
    • 33645516353 scopus 로고    scopus 로고
    • synchronization of coupeled nonidentical genetic oscillators
    • Li C., Chen L., and Aihara K. synchronization of coupeled nonidentical genetic oscillators. Phys. Bio. 3 (2006) 37-44
    • (2006) Phys. Bio. , vol.3 , pp. 37-44
    • Li, C.1    Chen, L.2    Aihara, K.3
  • 8
    • 38349061594 scopus 로고    scopus 로고
    • Stochastic synchronization of genetic oscillator networks
    • 10.1186/1752-0509-1-6
    • Li C., Chen L., and Aihara K. Stochastic synchronization of genetic oscillator networks. BMC Syst. Biol. 1 (2007) 10.1186/1752-0509-1-6
    • (2007) BMC Syst. Biol. , vol.1
    • Li, C.1    Chen, L.2    Aihara, K.3
  • 9
    • 0036576340 scopus 로고    scopus 로고
    • Stability of genetic regulatory networks with time delay
    • Chen L., and Aihara K. Stability of genetic regulatory networks with time delay. IEEE Trans. Circuits Syst. I. 49 (2002) 602-608
    • (2002) IEEE Trans. Circuits Syst. I. , vol.49 , pp. 602-608
    • Chen, L.1    Aihara, K.2
  • 10
    • 34548411782 scopus 로고    scopus 로고
    • Stability of Genetic Networks With SUM Regulatory Logic Lur'e System and LMI Approach
    • Li C., and Chen L. Stability of Genetic Networks With SUM Regulatory Logic Lur'e System and LMI Approach. IEEE Trans. Circuits Syst. I. 53 (2006) 2451-2458
    • (2006) IEEE Trans. Circuits Syst. I. , vol.53 , pp. 2451-2458
    • Li, C.1    Chen, L.2
  • 12
    • 33845399322 scopus 로고    scopus 로고
    • Intracellular delay limits cyclic changes in gene expression
    • Rateitschak K., and Wolkenhauer O. Intracellular delay limits cyclic changes in gene expression. Mathematical Biosciences 205 (2007) 163-179
    • (2007) Mathematical Biosciences , vol.205 , pp. 163-179
    • Rateitschak, K.1    Wolkenhauer, O.2
  • 13
  • 14
    • 0842285841 scopus 로고    scopus 로고
    • Summing up the noise in gene networks
    • Paulsson J. Summing up the noise in gene networks. Nature 427 (2004) 415-418
    • (2004) Nature , vol.427 , pp. 415-418
    • Paulsson, J.1
  • 15
    • 25444468618 scopus 로고    scopus 로고
    • Noise in gene expression, Origins, consequences, and control
    • Raser J.M., and O'Shea E.K. Noise in gene expression, Origins, consequences, and control. Science 309 (2005) 2010-2013
    • (2005) Science , vol.309 , pp. 2010-2013
    • Raser, J.M.1    O'Shea, E.K.2
  • 18
    • 33748030448 scopus 로고    scopus 로고
    • Transient resetting: A novel mechanism for synchrony and its biological examples
    • Li C., Chen L., and Aihara K. Transient resetting: A novel mechanism for synchrony and its biological examples. PLoS Comp Biol 2 (2006) e103
    • (2006) PLoS Comp Biol , vol.2
    • Li, C.1    Chen, L.2    Aihara, K.3
  • 19
    • 0032549745 scopus 로고    scopus 로고
    • Genomic cis-regulatory logic, Experimental and computational analysis of a sea urchin gene
    • Yuh C.H., Bolouri H., and Davidson E.H. Genomic cis-regulatory logic, Experimental and computational analysis of a sea urchin gene. Science 279 (1998) 1896-1902
    • (1998) Science , vol.279 , pp. 1896-1902
    • Yuh, C.H.1    Bolouri, H.2    Davidson, E.H.3
  • 20
  • 21
    • 33746428728 scopus 로고    scopus 로고
    • S. Kalir, S. Mangan, and U. Alon, A coherent feed-forward loop with a SUM input function prolongs flagella expression in Escherichia coli, Molecular Syst. Biol. (2005) 10.1038/msb4100010.
    • S. Kalir, S. Mangan, and U. Alon, A coherent feed-forward loop with a SUM input function prolongs flagella expression in Escherichia coli, Molecular Syst. Biol. (2005) 10.1038/msb4100010.
  • 23
    • 0037041888 scopus 로고    scopus 로고
    • Synthetic Gene Network for Entraining and Amplifying Cellular Oscillations
    • Hasty J., Dolnik N., Rottschaer V., and Collins1 J.J. Synthetic Gene Network for Entraining and Amplifying Cellular Oscillations. PRL. V88 14 (2002) 148101
    • (2002) PRL. , vol.V88 , Issue.14 , pp. 148101
    • Hasty, J.1    Dolnik, N.2    Rottschaer, V.3    Collins1, J.J.4
  • 25
    • 33847055491 scopus 로고    scopus 로고
    • Global exponential stability of bidirectional associative memory neural networks with distributed delays
    • Song Q.K., and Cao J. Global exponential stability of bidirectional associative memory neural networks with distributed delays. Journal of Computational and Applied Mathematics 202 (2007) 266-279
    • (2007) Journal of Computational and Applied Mathematics , vol.202 , pp. 266-279
    • Song, Q.K.1    Cao, J.2
  • 28
    • 0033593306 scopus 로고    scopus 로고
    • Molecular bases for circadian clocks
    • Dunlap J.C. Molecular bases for circadian clocks. Cell 96 (1999) 271-290
    • (1999) Cell , vol.96 , pp. 271-290
    • Dunlap, J.C.1
  • 29
    • 0025128938 scopus 로고
    • A two-step model for the localization of maternal mRNA in Xenopus oocytes, involvement of microtubules and microfilaments in the translocation and anchoring of Vg1 mRNA
    • Yisraeli J.K., Sokol S., and Melton D.A. A two-step model for the localization of maternal mRNA in Xenopus oocytes, involvement of microtubules and microfilaments in the translocation and anchoring of Vg1 mRNA. Development 108 (1990) 289-298
    • (1990) Development , vol.108 , pp. 289-298
    • Yisraeli, J.K.1    Sokol, S.2    Melton, D.A.3
  • 30
    • 0029807914 scopus 로고    scopus 로고
    • Molecular basis for cytoplasmic localization
    • King M.L. Molecular basis for cytoplasmic localization. Dev. Genet. 19 (1996) 183-189
    • (1996) Dev. Genet. , vol.19 , pp. 183-189
    • King, M.L.1
  • 31
    • 0029010867 scopus 로고
    • Axonal transport of tubulin in Ti1 Pioneer neurons in situ
    • Sabry J., O'Connor T., and Kirschner M.W. Axonal transport of tubulin in Ti1 Pioneer neurons in situ. Neuron 14 (1995) 1247-1256
    • (1995) Neuron , vol.14 , pp. 1247-1256
    • Sabry, J.1    O'Connor, T.2    Kirschner, M.W.3
  • 32
    • 0031712481 scopus 로고    scopus 로고
    • Microbial asymmetric cell division, localization of cell fate determinants
    • Jacobs C., and Shapiro L. Microbial asymmetric cell division, localization of cell fate determinants. Curr. Opin. Gen. Dev. 8 (1998) 386-391
    • (1998) Curr. Opin. Gen. Dev. , vol.8 , pp. 386-391
    • Jacobs, C.1    Shapiro, L.2
  • 33
    • 0141849177 scopus 로고    scopus 로고
    • Tsinghua University Press, Beijing 277
    • Chen J., and Chen X. Special Matrices (2001), Tsinghua University Press, Beijing 277
    • (2001) Special Matrices
    • Chen, J.1    Chen, X.2
  • 36
    • 18144371649 scopus 로고    scopus 로고
    • Distributed delays stabilize ecological feedback systems
    • Eurich C.W., Thiel A., and Fahse L. Distributed delays stabilize ecological feedback systems. Phys. Rev. Lett. 94 15 (2005) 158104
    • (2005) Phys. Rev. Lett. , vol.94 , Issue.15 , pp. 158104
    • Eurich, C.W.1    Thiel, A.2    Fahse, L.3
  • 37
    • 33749350211 scopus 로고    scopus 로고
    • Transcriptional dynamics of the embryonic stem cell switch
    • DOI: 10. 1371/journal.pcbi.0020123
    • V. Chickarmane, C. Troein, U.A. Nuber, H.M. Sauro, C. Peterson, Transcriptional dynamics of the embryonic stem cell switch. PLoS Comput Biol 2(9): e123. DOI: 10. 1371/journal.pcbi.0020123.
    • PLoS Comput Biol , vol.2 , Issue.9
    • Chickarmane, V.1    Troein, C.2    Nuber, U.A.3    Sauro, H.M.4    Peterson, C.5
  • 38
    • 34249079154 scopus 로고    scopus 로고
    • Network motifs: theory and experimental approaches
    • Alon U. Network motifs: theory and experimental approaches. Nature Reviews Genetics 8 (2007) 450-461
    • (2007) Nature Reviews Genetics , vol.8 , pp. 450-461
    • Alon, U.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.