메뉴 건너뛰기




Volumn 205, Issue 2, 2007, Pages 163-179

Intracellular delay limits cyclic changes in gene expression

Author keywords

Distributed time delay; Gene expression with negative feedback; Limit cycle oscillations

Indexed keywords

MATHEMATICAL MODELS; PROTEINS; RNA;

EID: 33845399322     PISSN: 00255564     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mbs.2006.08.010     Document Type: Article
Times cited : (46)

References (36)
  • 1
    • 0034633702 scopus 로고    scopus 로고
    • Generation of oscillations by the p53-Mdm2 feedback loop: a theoretical and experimental study
    • Bar-Or R.L., et al. Generation of oscillations by the p53-Mdm2 feedback loop: a theoretical and experimental study. Proc. Natl. Acad. Sci. USA 97 21 (2000) 11250
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , Issue.21 , pp. 11250
    • Bar-Or, R.L.1
  • 2
    • 0037174669 scopus 로고    scopus 로고
    • Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loop
    • Hirata H., et al. Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loop. Science 298 (2002) 840
    • (2002) Science , vol.298 , pp. 840
    • Hirata, H.1
  • 3
    • 0037044575 scopus 로고    scopus 로고
    • The IκB-NF-κB signaling module: temporal control and selective gene activation
    • Hoffmann A., et al. The IκB-NF-κB signaling module: temporal control and selective gene activation. Science 298 (2002) 1241
    • (2002) Science , vol.298 , pp. 1241
    • Hoffmann, A.1
  • 4
    • 0842332406 scopus 로고    scopus 로고
    • Dynamics of the p53-Mdm2 feedback loop in individual cells
    • Lahav G., et al. Dynamics of the p53-Mdm2 feedback loop in individual cells. Nat. Genet. 36 2 (2004) 147
    • (2004) Nat. Genet. , vol.36 , Issue.2 , pp. 147
    • Lahav, G.1
  • 5
    • 7444254365 scopus 로고    scopus 로고
    • Oscillations in NF-κB signaling control the dynamics of gene expression
    • Nelson D.E., et al. Oscillations in NF-κB signaling control the dynamics of gene expression. Science 306 (2004) 704
    • (2004) Science , vol.306 , pp. 704
    • Nelson, D.E.1
  • 7
    • 0043180477 scopus 로고    scopus 로고
    • Oscillatory expression of Hes1, p53, NF-κB driven by transcriptional time delays
    • Monk N.A.M. Oscillatory expression of Hes1, p53, NF-κB driven by transcriptional time delays. Curr. Biol. 13 (2003) 1409
    • (2003) Curr. Biol. , vol.13 , pp. 1409
    • Monk, N.A.M.1
  • 8
    • 0041677612 scopus 로고    scopus 로고
    • Autoinhibition with transcriptional delay: a simple mechanism for the zebrafish somitogenesis oscillator
    • Lewis J. Autoinhibition with transcriptional delay: a simple mechanism for the zebrafish somitogenesis oscillator. Curr. Biol. 13 (2003) 1398
    • (2003) Curr. Biol. , vol.13 , pp. 1398
    • Lewis, J.1
  • 9
    • 0037464494 scopus 로고    scopus 로고
    • Sustained oscillations and time delays in gene expression of protein Hes1
    • Jensen M.H., Sneppen K., and Tiana G. Sustained oscillations and time delays in gene expression of protein Hes1. FEBS Lett. 541 (2003) 176
    • (2003) FEBS Lett. , vol.541 , pp. 176
    • Jensen, M.H.1    Sneppen, K.2    Tiana, G.3
  • 11
    • 25444513462 scopus 로고    scopus 로고
    • Steady states and oscillations in the p53/Mdm2 network
    • Ciliberto A., Novak B., and Tyson J.J. Steady states and oscillations in the p53/Mdm2 network. Cell Cycle 4 3 (2005) 107
    • (2005) Cell Cycle , vol.4 , Issue.3 , pp. 107
    • Ciliberto, A.1    Novak, B.2    Tyson, J.J.3
  • 12
    • 33646235160 scopus 로고    scopus 로고
    • S. Zeiser et al., Number of active transcription factor binding sites is essential for the Hes7 oscillator, Theor. Biol. Med. Model. 3 (2006).
  • 13
    • 28744455886 scopus 로고    scopus 로고
    • The strength of indecisiveness: oscillatory behavior for better cell fate determination
    • Lahav G. The strength of indecisiveness: oscillatory behavior for better cell fate determination. Sci. STKE 264 (2004) pe55
    • (2004) Sci. STKE , vol.264
    • Lahav, G.1
  • 14
    • 10644221132 scopus 로고    scopus 로고
    • Oscillations in transcription factor dynamics: a new way to control gene expression
    • Nelson D.E., Sée V., Nelson G., and White M.R.H. Oscillations in transcription factor dynamics: a new way to control gene expression. Biochem. Soc. Trans. 32 6 (2004) 1090
    • (2004) Biochem. Soc. Trans. , vol.32 , Issue.6 , pp. 1090
    • Nelson, D.E.1    Sée, V.2    Nelson, G.3    White, M.R.H.4
  • 15
    • 15944426727 scopus 로고    scopus 로고
    • Comment on "Oscillations in NF-κB signaling control the dynamics of gene expression"
    • Barken D., et al. Comment on "Oscillations in NF-κB signaling control the dynamics of gene expression". Science 308 (2005) 52a
    • (2005) Science , vol.308
    • Barken, D.1
  • 16
    • 15944426727 scopus 로고    scopus 로고
    • Response to comment on "Oscillations in NF-κB signaling control the dynamics of gene expression"
    • Nelson D.E., et al. Response to comment on "Oscillations in NF-κB signaling control the dynamics of gene expression". Science 308 (2005) 52b
    • (2005) Science , vol.308
    • Nelson, D.E.1
  • 20
    • 85009420161 scopus 로고    scopus 로고
    • On approximation of systems with delay and their stability
    • Matvii O.V., and Cherevko I.M. On approximation of systems with delay and their stability. Nonlinear Oscillations 7 2 (2004) 207
    • (2004) Nonlinear Oscillations , vol.7 , Issue.2 , pp. 207
    • Matvii, O.V.1    Cherevko, I.M.2
  • 21
    • 28344455163 scopus 로고    scopus 로고
    • Approximation of delays in biochemical systems
    • Mocek W.T., Rudnicki R., and Voit E.O. Approximation of delays in biochemical systems. Math. Biosci. 198 (2005) 190
    • (2005) Math. Biosci. , vol.198 , pp. 190
    • Mocek, W.T.1    Rudnicki, R.2    Voit, E.O.3
  • 22
    • 0031935932 scopus 로고    scopus 로고
    • Frequency selectivity, multistability, and oscillations emerge from models of genetic regulatory systems
    • Smolen P., Baxter D.A., and Byrne J.H. Frequency selectivity, multistability, and oscillations emerge from models of genetic regulatory systems. Am. J. Physiol. Cell Physiol. 274 (1998) 531
    • (1998) Am. J. Physiol. Cell Physiol. , vol.274 , pp. 531
    • Smolen, P.1    Baxter, D.A.2    Byrne, J.H.3
  • 23
    • 0032698943 scopus 로고    scopus 로고
    • Effect of macromolecular transport and stochastic fluctuations on dynamics of genetic regulatory systems
    • Smolen P., Baxter D.A., and Byrne J.H. Effect of macromolecular transport and stochastic fluctuations on dynamics of genetic regulatory systems. Am. J. Physiol. Cell Physiol. 277 (1999) 777
    • (1999) Am. J. Physiol. Cell Physiol. , vol.277 , pp. 777
    • Smolen, P.1    Baxter, D.A.2    Byrne, J.H.3
  • 24
    • 0037417886 scopus 로고    scopus 로고
    • Identification of nucleocytoplasmic cycling as a remote sensor in cellular signaling by data-based modeling
    • Swameye I., Müller T.G., Timmer J., Sandra O., and Klingmüller U. Identification of nucleocytoplasmic cycling as a remote sensor in cellular signaling by data-based modeling. Proc. Natl. Acad. Sci. USA 100 3 (2003) 1028
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , Issue.3 , pp. 1028
    • Swameye, I.1    Müller, T.G.2    Timmer, J.3    Sandra, O.4    Klingmüller, U.5
  • 25
    • 33845415814 scopus 로고    scopus 로고
    • An alternative approach for investigating a time delay model of the Jak-Stat signaling pathway
    • Nikolov S., Kotev V., and Petrov V. An alternative approach for investigating a time delay model of the Jak-Stat signaling pathway. Comtes Rendus d. 1'Acad. Bulg. Sci. 58 (2005) 889
    • (2005) Comtes Rendus d. 1'Acad. Bulg. Sci. , vol.58 , pp. 889
    • Nikolov, S.1    Kotev, V.2    Petrov, V.3
  • 27
    • 18144371649 scopus 로고    scopus 로고
    • Distributed delays stabilize ecological feedback systems
    • Eurich C.W., Thiel A., and Fahse L. Distributed delays stabilize ecological feedback systems. Phys. Rev. Lett. 94 15 (2005) 158104-1
    • (2005) Phys. Rev. Lett. , vol.94 , Issue.15 , pp. 158104-1
    • Eurich, C.W.1    Thiel, A.2    Fahse, L.3
  • 29
    • 33845381317 scopus 로고    scopus 로고
    • W. Just, H. Benner, E. Schöll, Advances in Solid State Physics, vol. 43, B. Kramer (Ed.), Springer, Berlin, 2003, pp. 589-603.
  • 30
    • 0009677529 scopus 로고    scopus 로고
    • Sufficient conditions for stability of linear differential equations with distributed delay
    • Bernard S., Belair J., and Mackey M.C. Sufficient conditions for stability of linear differential equations with distributed delay. Discret. Contin. Dyn. Syst. B 1 2 (2001) 233
    • (2001) Discret. Contin. Dyn. Syst. B , vol.1 , Issue.2 , pp. 233
    • Bernard, S.1    Belair, J.2    Mackey, M.C.3
  • 31
    • 2142762704 scopus 로고    scopus 로고
    • Complex dynamics is abolished in delayed recurrent systems with distributed feedback times
    • Thiel A., Schwegler H., and Eurich C.W. Complex dynamics is abolished in delayed recurrent systems with distributed feedback times. Complexity 8 4 (2003) 102
    • (2003) Complexity , vol.8 , Issue.4 , pp. 102
    • Thiel, A.1    Schwegler, H.2    Eurich, C.W.3
  • 32
    • 0013823048 scopus 로고
    • Oscillatory behavior in enzymatic control processes
    • Goodwin B.C. Oscillatory behavior in enzymatic control processes. Adv. Enzyme Regul. 3 (1965) 425
    • (1965) Adv. Enzyme Regul. , vol.3 , pp. 425
    • Goodwin, B.C.1
  • 33
    • 0002275384 scopus 로고
    • The dynamics of feedback control circuits in biochemical pathways
    • Tyson J.J., and Othmer H.G. The dynamics of feedback control circuits in biochemical pathways. Prog. Theor. Biol. 5 (1978) 1
    • (1978) Prog. Theor. Biol. , vol.5 , pp. 1
    • Tyson, J.J.1    Othmer, H.G.2
  • 34
    • 0002759060 scopus 로고
    • Periodic solutions for certain protein synthesis models
    • Mahaffy J.M. Periodic solutions for certain protein synthesis models. J. Math. Anal. Appl. 74 (1980) 72
    • (1980) J. Math. Anal. Appl. , vol.74 , pp. 72
    • Mahaffy, J.M.1
  • 35
    • 0001051330 scopus 로고
    • The Poincaré-Bendixson theorem for monotone cyclic feedback systems
    • Mallet-Paret J., and Smith H.L. The Poincaré-Bendixson theorem for monotone cyclic feedback systems. J. Dyn. Differ. Equations 2 4 (1990) 367
    • (1990) J. Dyn. Differ. Equations , vol.2 , Issue.4 , pp. 367
    • Mallet-Paret, J.1    Smith, H.L.2
  • 36
    • 0034691214 scopus 로고    scopus 로고
    • Stochastic focussing: fluctuation enhanced sensitivity of intracellular regulation
    • Paulsson J., Berg O.G., and Ehrenberg M. Stochastic focussing: fluctuation enhanced sensitivity of intracellular regulation. Proc. Natl. Acad. Sci. USA 97 (2000) 7148
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 7148
    • Paulsson, J.1    Berg, O.G.2    Ehrenberg, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.