Efficient algorithms for reconstructing zero-recombinant haplotypes on a pedigree based on fast elimination of redundant linear equations

SIAM Journal on Computing

Volumn 38, Issue 6, 2009, Pages 2198-2219

  Xiao, Jing ^a   Liu, Lan ^b   Xia, Lirong ^c   Jiang, Tao ^d  

^a TSINGHUA UNIVERSITY   (China)

^b GOOGLE INC   (United States)

^c Duke University   (United States)

^d University of California Riverside   (United States)

Author keywords

Haplotype inference; Low stretch spanning tree; Pedigree analysis; System of linear equations

Indexed keywords

COMPUTATIONAL BIOLOGY; EFFICIENT ALGORITHM; EFFICIENT METHOD; ELIMINATION METHOD; FINITE FIELDS; GAUSSIAN ELIMINATION; GRAPH STRUCTURES; HAPLOTYPE INFERENCE; HAPLOTYPES; LOW-STRETCH SPANNING TREE; MENDELIAN LAW OF INHERITANCE; NEW SYSTEM; PEDIGREE ANALYSIS; RECENT PROGRESS; RUNNING TIME; SPANNING TREE; SYSTEM OF LINEAR EQUATIONS; SYSTEMS OF LINEAR EQUATIONS;

BIOINFORMATICS; LINEAR EQUATIONS;

GRAPH THEORY;

EID: 65949095626     PISSN: 00975397     EISSN: None     Source Type: Journal    
DOI: 10.1137/070687591     Document Type: Article

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