-
1
-
-
0037561920
-
Characterization of a novel coronavirus associated with severe acute respiratory syndrome
-
Rota, P. A., M. S. Oberste, S. S. Monroe, W. A. Nix, R. Campagnoli, et al. 2003. Characterization of a novel coronavirus associated with severe acute respiratory syndrome. Science. 300:1394-1399.
-
(2003)
Science
, vol.300
, pp. 1394-1399
-
-
Rota, P.A.1
Oberste, M.S.2
Monroe, S.S.3
Nix, W.A.4
Campagnoli, R.5
-
2
-
-
0038823524
-
The genome sequence of the SARS-associated coronavirus
-
Marra, M. A., S. J. Jones, C. R. Astell, R. A. Holt, A. Brooks-Wilson, et al. 2003. The genome sequence of the SARS-associated coronavirus. Science. 300:1399-1404.
-
(2003)
Science
, vol.300
, pp. 1399-1404
-
-
Marra, M.A.1
Jones, S.J.2
Astell, C.R.3
Holt, R.A.4
Brooks-Wilson, A.5
-
3
-
-
6344222994
-
In vitro biochemical and thermodynamical characterization of nucleocapsid protein of SARS
-
Luo, H., F. Ye, T. Sun, L. Yue, S. Peng, et al. 2004. In vitro biochemical and thermodynamical characterization of nucleocapsid protein of SARS. Biophys. Chem. 112:15-25.
-
(2004)
Biophys. Chem
, vol.112
, pp. 15-25
-
-
Luo, H.1
Ye, F.2
Sun, T.3
Yue, L.4
Peng, S.5
-
4
-
-
4644247362
-
Low stability of nucleocapsid protein in SARS virus
-
Wang, Y., X. Wu, Y. Wang, B. Li, H. Zhou, et al. 2004. Low stability of nucleocapsid protein in SARS virus. Biochemistry. 43:11103-11108.
-
(2004)
Biochemistry
, vol.43
, pp. 11103-11108
-
-
Wang, Y.1
Wu, X.2
Wang, Y.3
Li, B.4
Zhou, H.5
-
5
-
-
0242361262
-
Stability of SARS coronavirus in human specimen and environment and its sensitivity to heating and UV irradiation
-
Duan, S. M., X. S. Zhao, R. F. Wen, J. J. Huang, G. H. Pi, et al. 2003. Stability of SARS coronavirus in human specimen and environment and its sensitivity to heating and UV irradiation. Biomed. Environ. Sci. 16:105-111.
-
(2003)
Biomed. Environ. Sci
, vol.16
, pp. 105-111
-
-
Duan, S.M.1
Zhao, X.S.2
Wen, R.F.3
Huang, J.J.4
Pi, G.H.5
-
6
-
-
31544478849
-
Modular organization of SRAS coronavirus nucleocapsid protein
-
Chang, C.-k., S.-C. Sue, T.-h. Yu, C.-M. Hsieh, C.-K. Tsai, et al. 2006. Modular organization of SRAS coronavirus nucleocapsid protein. J. Biomed. Sci. 13:59-72.
-
(2006)
J. Biomed. Sci
, vol.13
, pp. 59-72
-
-
Chang, C.-K.1
Sue, S.-C.2
Yu, T.-H.3
Hsieh, C.-M.4
Tsai, C.-K.5
-
7
-
-
27644584130
-
Assembly of severe acute respiratory syndrome coronavirus RNA packaging signal into virus-like particles is nucleocapsid dependent
-
Hsieh, P. K., S. C. Chang, C. C. Huang, T. T. Lee, C. W. Hsiao, et al. 2005. Assembly of severe acute respiratory syndrome coronavirus RNA packaging signal into virus-like particles is nucleocapsid dependent. J. Virol. 79:13848-13855.
-
(2005)
J. Virol
, vol.79
, pp. 13848-13855
-
-
Hsieh, P.K.1
Chang, S.C.2
Huang, C.C.3
Lee, T.T.4
Hsiao, C.W.5
-
8
-
-
34147113199
-
Structure of the SARS coronavirus nucleocapsid protein RNA-binding dimerization domain suggests a mechanism for helical packaging of viral RNA
-
Chen, C.-Y., C.-k. Chang, Y.-W. Chang, S.-C. Sue, H.-I. Bai, et al. 2007. Structure of the SARS coronavirus nucleocapsid protein RNA-binding dimerization domain suggests a mechanism for helical packaging of viral RNA. J. Mol. Biol. 368:1075-1086.
-
(2007)
J. Mol. Biol
, vol.368
, pp. 1075-1086
-
-
Chen, C.-Y.1
Chang, C.-K.2
Chang, Y.-W.3
Sue, S.-C.4
Bai, H.-I.5
-
9
-
-
85031352949
-
-
Reference deleted in proof
-
Reference deleted in proof.
-
-
-
-
10
-
-
0033954256
-
The Protein Data Bank
-
Berman, H. M., J. Westbrook, Z. Feng, G. Gilliland, T. N. Bhat, et al. 2000. The Protein Data Bank. Nucl. Acid Res. 28:235-242.
-
(2000)
Nucl. Acid Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
-
11
-
-
0014959662
-
A calorimetric study of thermally induced conformational transitions of ribonuclease A and certain of its derivatives
-
Tsong, T.-Y., R. P. Hearn, D. P. Wrathall, and J. M. Sturtevant. 1970. A calorimetric study of thermally induced conformational transitions of ribonuclease A and certain of its derivatives. Biochemistry. 9:2666-2677.
-
(1970)
Biochemistry
, vol.9
, pp. 2666-2677
-
-
Tsong, T.-Y.1
Hearn, R.P.2
Wrathall, D.P.3
Sturtevant, J.M.4
-
12
-
-
46849118765
-
Hydrophobic condensation and modular assembly model of protein folding
-
Tsong, T.-Y., C.-K. Hu, and M.-C. Wu. 2008. Hydrophobic condensation and modular assembly model of protein folding. Biosystems. 93:78-89.
-
(2008)
Biosystems
, vol.93
, pp. 78-89
-
-
Tsong, T.-Y.1
Hu, C.-K.2
Wu, M.-C.3
-
13
-
-
0020972782
-
Theoretical studies of protein folding
-
Gō, N. 1983. Theoretical studies of protein folding. Annu. Rev. Biophys. Bioeng. 12:183-210.
-
(1983)
Annu. Rev. Biophys. Bioeng
, vol.12
, pp. 183-210
-
-
Gō, N.1
-
14
-
-
0034685604
-
Topological and energetic factors: What determines the structural detail of transition state ensemble and en-route intermediates for protein folding? An investigation for small globular proteins
-
Clementi, C., H. Nymeyer, and J. N. Onuchic. 2000. Topological and energetic factors: what determines the structural detail of transition state ensemble and en-route intermediates for protein folding? An investigation for small globular proteins. J. Mol. Biol. 298:937-953.
-
(2000)
J. Mol. Biol
, vol.298
, pp. 937-953
-
-
Clementi, C.1
Nymeyer, H.2
Onuchic, J.N.3
-
15
-
-
33646987405
-
Optimized Monte Carlo data analysis
-
Ferrenberg, A. M., and R. H. Swendsen. 1989. Optimized Monte Carlo data analysis. Phys. Rev. Lett. 63:1195-1198.
-
(1989)
Phys. Rev. Lett
, vol.63
, pp. 1195-1198
-
-
Ferrenberg, A.M.1
Swendsen, R.H.2
-
16
-
-
84984548144
-
Characterization of severe acute respiratory syndrome coronavirus genomes in Taiwan: Molecular epidemiology and genome evolution
-
Yeh, S.-H., H.-Y. Wang, C.-Y. Tsai, C.-L. Kao, J.-Y. Yang, et al. 2004. Characterization of severe acute respiratory syndrome coronavirus genomes in Taiwan: molecular epidemiology and genome evolution. Proc. Natl. Acad. Sci. USA. 101:2542-2547.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 2542-2547
-
-
Yeh, S.-H.1
Wang, H.-Y.2
Tsai, C.-Y.3
Kao, C.-L.4
Yang, J.-Y.5
-
17
-
-
26844453741
-
The dimer interface of the SARS coronavirus nucleocapsid protein adapts a porcine respiratory and reproductive syndrome viruslike structure
-
Chang, C.-k., S.-C. Sue, T.-H. Yu, C.-M. Hsieh, C.-K. Tsai, et al. 2005. The dimer interface of the SARS coronavirus nucleocapsid protein adapts a porcine respiratory and reproductive syndrome viruslike structure. FEBS Lett. 579:5663-5668.
-
(2005)
FEBS Lett
, vol.579
, pp. 5663-5668
-
-
Chang, C.-K.1
Sue, S.-C.2
Yu, T.-H.3
Hsieh, C.-M.4
Tsai, C.-K.5
-
19
-
-
0033794319
-
Random coil chemical shifts in acidic 8 M urea: Implementation of random coil shift data in NMRView
-
Schwarzinger, S., G. J. Kroon, T. R. Foss, P. E. Wright, and H. J. Dyson. 2000. Random coil chemical shifts in acidic 8 M urea: implementation of random coil shift data in NMRView. J. Biomol. NMR. 18:43-48.
-
(2000)
J. Biomol. NMR
, vol.18
, pp. 43-48
-
-
Schwarzinger, S.1
Kroon, G.J.2
Foss, T.R.3
Wright, P.E.4
Dyson, H.J.5
-
20
-
-
0034836367
-
Sequence-dependent correction of random coil NMR chemical shifts
-
Schwarzinger, S., G. J. Kroon, T. R. Foss, J. Chung, P. E. Wright, et al. 2001. Sequence-dependent correction of random coil NMR chemical shifts. J. Am. Chem. Soc. 123:2970-2978.
-
(2001)
J. Am. Chem. Soc
, vol.123
, pp. 2970-2978
-
-
Schwarzinger, S.1
Kroon, G.J.2
Foss, T.R.3
Chung, J.4
Wright, P.E.5
-
21
-
-
0032742688
-
Gō-ing for the prediction of protein folding mechanisms
-
Takada, S. 1999. Gō-ing for the prediction of protein folding mechanisms. Proc. Natl. Acad. Sci. USA. 96:11698-11700.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 11698-11700
-
-
Takada, S.1
-
23
-
-
27744548865
-
Folding of the protein domain hbSBD
-
Kouza, M., C.-F. Chang, S. Hayryan, T.-h. Yu, M. S. Li, et al. 2005. Folding of the protein domain hbSBD. Biophys. J. 89:3353-3361.
-
(2005)
Biophys. J
, vol.89
, pp. 3353-3361
-
-
Kouza, M.1
Chang, C.-F.2
Hayryan, S.3
Yu, T.-H.4
Li, M.S.5
-
24
-
-
30444455738
-
Multiple stepwise refolding of immunoglobulin domain I27 upon force quench depends on initial conditions
-
Li, M.-S., C.-K. Hu, D. K. Klimov, and D. Thirumalai. 2006. Multiple stepwise refolding of immunoglobulin domain I27 upon force quench depends on initial conditions. Proc. Natl. Acad. Sci. USA. 103:93-98.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 93-98
-
-
Li, M.-S.1
Hu, C.-K.2
Klimov, D.K.3
Thirumalai, D.4
-
25
-
-
38849169933
-
New force replica exchange method and protein folding pathways probed by force-clamp technique
-
Kouza, M., C.-K. Hu, and M. S. Li. 2008. New force replica exchange method and protein folding pathways probed by force-clamp technique. J. Chem. Phys. 128:045103.
-
(2008)
J. Chem. Phys
, vol.128
, pp. 045103
-
-
Kouza, M.1
Hu, C.-K.2
Li, M.S.3
-
26
-
-
36749110571
-
Computer simulation method for the calculation of equilibrium constants for the formation of physical clusters and molecules: Application to small water clusters
-
Swope, W. C., H. C. Andersen, P. H. Berens, and K. R. Wilson. 1982. Computer simulation method for the calculation of equilibrium constants for the formation of physical clusters and molecules: application to small water clusters. J. Chem. Phys. 76:637-649.
-
(1982)
J. Chem. Phys
, vol.76
, pp. 637-649
-
-
Swope, W.C.1
Andersen, H.C.2
Berens, P.H.3
Wilson, K.R.4
-
27
-
-
0030624384
-
Protein folding kinetics: Timescales, pathways and energy landscapes in terms of sequence-dependent properties
-
Veitshans, T., D. K. Klimov, and D. Thirumalai. 1997. Protein folding kinetics: timescales, pathways and energy landscapes in terms of sequence-dependent properties. Fold. Des. 2:1-22.
-
(1997)
Fold. Des
, vol.2
, pp. 1-22
-
-
Veitshans, T.1
Klimov, D.K.2
Thirumalai, D.3
-
28
-
-
33846460423
-
Refolding upon force quench and pathways of mechanical and thermal unfolding of ubiquitin
-
Li, M. S., M. Kouza, and C.-K. Hu. 2007. Refolding upon force quench and pathways of mechanical and thermal unfolding of ubiquitin. Biophys. J. 92:547-561.
-
(2007)
Biophys. J
, vol.92
, pp. 547-561
-
-
Li, M.S.1
Kouza, M.2
Hu, C.-K.3
-
29
-
-
0347123330
-
Thermal denaturation and folding rates of single domain proteins: Size matters
-
Li, M. S., D. K. Klimov, and D. Thirumalai. 2004. Thermal denaturation and folding rates of single domain proteins: size matters. Polymer (Guildf.). 45:573-579.
-
(2004)
Polymer (Guildf.)
, vol.45
, pp. 573-579
-
-
Li, M.S.1
Klimov, D.K.2
Thirumalai, D.3
-
30
-
-
42749106226
-
Finite size effects on thermal denaturation of globular proteins
-
Li, M. S., D. K. Klimov, and D. Thirumalai. 2004. Finite size effects on thermal denaturation of globular proteins. Phys. Rev. Lett. 93:268107.
-
(2004)
Phys. Rev. Lett
, vol.93
, pp. 268107
-
-
Li, M.S.1
Klimov, D.K.2
Thirumalai, D.3
-
31
-
-
14644442376
-
Finite size effects on calorimetric cooperativity of two-state proteins
-
Li, M. S., D. K. Klimov, and D. Thirumalai. 2005. Finite size effects on calorimetric cooperativity of two-state proteins. Physica A. 350:38-44.
-
(2005)
Physica A
, vol.350
, pp. 38-44
-
-
Li, M.S.1
Klimov, D.K.2
Thirumalai, D.3
-
32
-
-
31544472338
-
Effect of finite size on cooperativity and folding rates of proteins
-
Kouza, M., M. S. Li, C.-K. Hu, E. P. O'Brien, Jr., and D. Thirumalai. 2006. Effect of finite size on cooperativity and folding rates of proteins. J. Phys. Chem. A. 110:671-676.
-
(2006)
J. Phys. Chem. A
, vol.110
, pp. 671-676
-
-
Kouza, M.1
Li, M.S.2
Hu, C.-K.3
O'Brien Jr., E.P.4
Thirumalai, D.5
-
33
-
-
0035850732
-
Roles of native topology and chainlength scaling in protein folding: A simulation study with a Gō-like model
-
Koga, K., and S. Takaga. 2001. Roles of native topology and chainlength scaling in protein folding: a simulation study with a Gō-like model. J. Mol. Biol. 313:171-180.
-
(2001)
J. Mol. Biol
, vol.313
, pp. 171-180
-
-
Koga, K.1
Takaga, S.2
-
34
-
-
0035426074
-
SMMP: A modern package for simulation of proteins
-
Eisenmenger, F., U. H. E. Hansmann, S. Hayryan, and C.-K. Hu. 2001. SMMP: a modern package for simulation of proteins. Comput. Phys. Commun. 138:192-212.
-
(2001)
Comput. Phys. Commun
, vol.138
, pp. 192-212
-
-
Eisenmenger, F.1
Hansmann, U.H.E.2
Hayryan, S.3
Hu, C.-K.4
-
35
-
-
31544448267
-
An enhanced version of SMMP - open-source software package for simulation of proteins
-
Eisenmenger, F., U. H. E. Hansmann, S. Hayryan, and C.-K. Hu. 2006. An enhanced version of SMMP - open-source software package for simulation of proteins. Comp. Phys. Commun. 174:422-429.
-
(2006)
Comp. Phys. Commun
, vol.174
, pp. 422-429
-
-
Eisenmenger, F.1
Hansmann, U.H.E.2
Hayryan, S.3
Hu, C.-K.4
-
37
-
-
28644431872
-
Free energy landscape and folding mechanism of a β-hairpin in explicit water: A replica exchange molecular dynamics study
-
Nguyen, P. H., G. Stock, E. Mittag, C.-K. Hu, and M. S. Li. 2005. Free energy landscape and folding mechanism of a β-hairpin in explicit water: a replica exchange molecular dynamics study. Proteins: Struct. Funct. Bioinf. 61:795-808.
-
(2005)
Proteins: Struct. Funct. Bioinf
, vol.61
, pp. 795-808
-
-
Nguyen, P.H.1
Stock, G.2
Mittag, E.3
Hu, C.-K.4
Li, M.S.5
-
38
-
-
33847656545
-
Efficient combination of Wang-Landau and transition matrix Monte Carlo methods for protein simulations
-
Ghulghazaryan, R. G., S. Hayryan, and C.-K. Hu. 2007. Efficient combination of Wang-Landau and transition matrix Monte Carlo methods for protein simulations. J. Comp. Chem. 28:715-726.
-
(2007)
J. Comp. Chem
, vol.28
, pp. 715-726
-
-
Ghulghazaryan, R.G.1
Hayryan, S.2
Hu, C.-K.3
|