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Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 79, Issue 3, 2009, Pages

Stochastic model for nucleosome sliding under an external force

(5) Mollazadeh Beidokhti, L a Deseigne, J b,c Lacoste, D b Mohammad Rafiee, F a Schiessel, H d

a INSTITUTE FOR ADVANCED STUDIES IN BASIC SCIENCES IASBS (Iran)

b PSL RESEARCH UNIVERSITY (France)

c SERVICE DE PHYSIQUE DE L ETAT CONDENSÉ (France)

d UNIVERSITEIT LEIDEN (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

DIFFUSION CONSTANTS; DNA BINDINGS; EXTERNAL FORCES; NUCLEOSOME; NUCLEOSOME SLIDING; NUCLEOSOMES; THREE-STATE MODELS; TWIST DEFECTS; WORK STUDIES;

DNA; GENES; LIGANDS; MECHANICAL PROPERTIES; NUCLEIC ACIDS; RANDOM PROCESSES;

STOCHASTIC MODELS;

EID: 65349132939 PISSN: 15393755 EISSN: 15502376 Source Type: Journal
DOI: 10.1103/PhysRevE.79.031922 Document Type: Article

Times cited : (15)

References (34)

1
- 1842411320
- 10.1038/38444
- K. Luger, A. W. Mäder, R. K. Richmond, D. F. Sargent, and T. J. Richmond, Nature (London) 389, 251 (1997). 10.1038/38444
- (1997) Nature (London) , vol.389 , pp. 251
- Luger, K.¹ Mäder, A.W.² Richmond, R.K.³ Sargent, D.F.⁴ Richmond, T.J.⁵

2
- 0026517738
- 10.1073/pnas.89.3.1095
- J. Widom, Proc. Natl. Acad. Sci. U.S.A. 89, 1095 (1992). 10.1073/pnas.89.3.1095
- (1992) Proc. Natl. Acad. Sci. U.S.A. , vol.89 , pp. 1095
- Widom, J.¹

3
- 0028791330
- 10.1006/jmbi.1995.0606
- K. J. Polach and J. Widom, J. Mol. Biol. 254, 130 (1995). 10.1006/jmbi.1995.0606
- (1995) J. Mol. Biol. , vol.254 , pp. 130
- Polach, K.J.¹ Widom, J.²

4
- 11444262202
- 10.1038/nsmb869
- G. Li, M. Levitus, C. Bustamante, and J. Widom, Nat. Struct. Mol. Biol. 12, 46 (2005). 10.1038/nsmb869
- (2005) Nat. Struct. Mol. Biol. , vol.12 , pp. 46
- Li, G.¹ Levitus, M.² Bustamante, C.³ Widom, J.⁴

5
- 33750998762
- 10.1103/PhysRevLett.97.208102
- W. Möbius, R. A. Neher, and U. Gerland, Phys. Rev. Lett. 97, 208102 (2006). 10.1103/PhysRevLett.97.208102
- (2006) Phys. Rev. Lett. , vol.97 , pp. 208102
- Möbius, W.¹ Neher, R.A.² Gerland, U.³

6
- 0018036889
- 10.1016/0092-8674(78)90279-9
- P. Beard, Cell 15, 955 (1978). 10.1016/0092-8674(78)90279-9
- (1978) Cell , vol.15 , pp. 955
- Beard, P.¹

7
- 0025887821
- 10.1016/0022-2836(91)90384-I;
- S. Pennings, G. Meersseman, and E. M. Bradbury, J. Mol. Biol. 220, 101 (1991) 10.1016/0022-2836(91)90384-I
- (1991) J. Mol. Biol. , vol.220 , pp. 101
- Pennings, S.¹ Meersseman, G.² Bradbury, E.M.³

8
- 0026642219
- G. Meersseman, S. Pennings, and E. M. Bradbury, EMBO J. 11, 2951 (1992).
- (1992) EMBO J. , vol.11 , pp. 2951
- Meersseman, G.¹ Pennings, S.² Bradbury, E.M.³

9
- 0032559424
- 10.1006/jmbi.1997.1464
- A. Flaus and T. J. Richmond, J. Mol. Biol. 275, 427 (1998). 10.1006/jmbi.1997.1464
- (1998) J. Mol. Biol. , vol.275 , pp. 427
- Flaus, A.¹ Richmond, T.J.²

10
- 0037388372
- 10.1002/bip.10323
- A. Flaus and T. Owen-Hughes, Biopolymers 68, 563 (2003). 10.1002/bip.10323
- (2003) Biopolymers , vol.68 , pp. 563
- Flaus, A.¹ Owen-Hughes, T.²

11
- 0037604739
- 10.1088/0953-8984/15/19/203
- H. Schiessel, J. Phys.: Condens. Matter 15, R699 (2003). 10.1088/0953-8984/15/19/203
- (2003) J. Phys.: Condens. Matter , vol.15 , pp. 699
- Schiessel, H.¹

12
- 35348910082
- 10.1073/pnas.0701459104
- P. Ranjith, J. Yan, and J. F. Marko, Proc. Natl. Acad. Sci. U.S.A. 104, 13649 (2007). 10.1073/pnas.0701459104
- (2007) Proc. Natl. Acad. Sci. U.S.A. , vol.104 , pp. 13649
- Ranjith, P.¹ Yan, J.² Marko, J.F.³

13
- 0035820523
- 10.1103/PhysRevLett.86.4414
- H. Schiessel, J. Widom, R. F. Bruinsma, and W. M. Gelbart, Phys. Rev. Lett. 86, 4414 (2001). 10.1103/PhysRevLett.86.4414
- (2001) Phys. Rev. Lett. , vol.86 , pp. 4414
- Schiessel, H.¹ Widom, J.² Bruinsma, R.F.³ Gelbart, W.M.⁴

14
- 0038298709
- 10.1016/S0006-3495(03)70044-7
- I. M. Kulić and H. Schiessel, Biophys. J. 84, 3197 (2003). 10.1016/S0006-3495(03)70044-7
- (2003) Biophys. J. , vol.84 , pp. 3197
- Kulić, I.M.¹ Schiessel, H.²

15
- 0242677113
- 10.1103/PhysRevLett.91.148103
- I. M. Kulić and H. Schiessel, Phys. Rev. Lett. 91, 148103 (2003). 10.1103/PhysRevLett.91.148103
- (2003) Phys. Rev. Lett. , vol.91 , pp. 148103
- Kulić, I.M.¹ Schiessel, H.²

16
- 7044220398
- 10.1016/j.jmb.2004.09.027
- F. Mohammad-Rafiee, I. M. Kulić, and H. Schiessel, J. Mol. Biol. 344, 47 (2004). 10.1016/j.jmb.2004.09.027
- (2004) J. Mol. Biol. , vol.344 , pp. 47
- Mohammad-Rafiee, F.¹ Kulić, I.M.² Schiessel, H.³

17
- 33747500567
- 10.1038/nature04979
- E. Segal, Y. Fondufe-Mittendorf, L. Chen, A. Thåström, Y. Field, I. K. Moore, J.-P. Z. Wang, and J. Widom, Nature (London) 442, 772 (2006). 10.1038/nature04979
- (2006) Nature (London) , vol.442 , pp. 772
- Segal, E.¹ Fondufe-Mittendorf, Y.² Chen, L.³ Thåström, A.⁴ Field, Y.⁵ Moore, I.K.⁶ Wang, J.-P.Z.⁷ Widom, J.⁸

18
- 0036384345
- 10.1016/S0022-2836(02)00598-3
- J. M. Gottesfeld, J. M. Belitsky, C. Melander, P. B. Dervan, and K. Luger, J. Mol. Biol. 321, 249 (2002). 10.1016/S0022-2836(02)00598-3
- (2002) J. Mol. Biol. , vol.321 , pp. 249
- Gottesfeld, J.M.¹ Belitsky, J.M.² Melander, C.³ Dervan, P.B.⁴ Luger, K.⁵

19
- 35148856155
- 10.1103/PhysRevLett.99.158102
- A. W. C. Lau, D. Lacoste, and K. Mallick, Phys. Rev. Lett. 99, 158102 (2007). 10.1103/PhysRevLett.99.158102
- (2007) Phys. Rev. Lett. , vol.99 , pp. 158102
- Lau, A.W.C.¹ Lacoste, D.² Mallick, K.³

20
- 48349119578
- 10.1103/PhysRevE.78.011915
- D. Lacoste, A. W. C. Lau, and K. Mallick, Phys. Rev. E 78, 011915 (2008). 10.1103/PhysRevE.78.011915
- (2008) Phys. Rev. e , vol.78 , pp. 011915
- Lacoste, D.¹ Lau, A.W.C.² Mallick, K.³

21
- 0001079085
- 10.1073/pnas.86.19.7418;
- T. E. Shrader and D. M. Crothers, Proc. Natl. Acad. Sci. U.S.A. 86, 7418 (1989) 10.1073/pnas.86.19.7418
- (1989) Proc. Natl. Acad. Sci. U.S.A. , vol.86 , pp. 7418
- Shrader, T.E.¹ Crothers, D.M.²

22
- 0025144957
- 10.1016/S0022-2836(05)80061-0
- T. E. Shrader and D. M. Crothers, J. Mol. Biol. 216, 69 (1990). 10.1016/S0022-2836(05)80061-0
- (1990) J. Mol. Biol. , vol.216 , pp. 69
- Shrader, T.E.¹ Crothers, D.M.²

23
- 0033746119
- 10.1016/S0378-4371(99)00586-5
- A. B. Kolomeisky and M. E. Fisher, Physica A 279, 1 (2000). 10.1016/S0378-4371(99)00586-5
- (2000) Physica A , vol.279 , pp. 1
- Kolomeisky, A.B.¹ Fisher, M.E.²

24
- 0347193736
- 10.1103/RevModPhys.62.251
- P. Hänggi, P. Talkner, and M. Borkovec, Rev. Mod. Phys. 62, 251 (1990). 10.1103/RevModPhys.62.251
- (1990) Rev. Mod. Phys. , vol.62 , pp. 251
- Hänggi, P.¹ Talkner, P.² Borkovec, M.³

25
- 34547688855
- 10.1103/PhysRevLett.99.058105
- T. Chou, Phys. Rev. Lett. 99, 058105 (2007). 10.1103/PhysRevLett.99. 058105
- (2007) Phys. Rev. Lett. , vol.99 , pp. 058105
- Chou, T.¹

26
- 0028125847
- 10.1016/0092-8674(94)90343-3
- V. M. Studitsky, D. J. Clark, and G. Felsenfeld, Cell 76, 371 (1994). 10.1016/0092-8674(94)90343-3
- (1994) Cell , vol.76 , pp. 371
- Studitsky, V.M.¹ Clark, D.J.² Felsenfeld, G.³

27
- 0033197561
- 10.1016/S1097-2765(00)80339-1
- J. Bednar, V. M. Studitsky, S. A. Gregoryev, G. Felsenfeld, and C. L. Woodcock, Mol. Cell 4, 377 (1999). 10.1016/S1097-2765(00)80339-1
- (1999) Mol. Cell , vol.4 , pp. 377
- Bednar, J.¹ Studitsky, V.M.² Gregoryev, S.A.³ Felsenfeld, G.⁴ Woodcock, C.L.⁵

28
- 0029007043
- B. ten Heggeler-Bordier, C. Schild-Poulter, S. Chapel, and W. Wahli, EMBO J. 14, 2561 (1995)
- (1995) EMBO J. , vol.14 , pp. 2561
- Ten Heggeler-Bordier, B.¹ Schild-Poulter, C.² Chapel, S.³ Wahli, W.⁴

29
- 0034674153
- 10.1006/jmbi.2000.3790
- B. ten Heggeler-Bordier, S. Muller, M. Monestier, and W. Wahli, J. Mol. Biol. 299, 853 (2000). 10.1006/jmbi.2000.3790
- (2000) J. Mol. Biol. , vol.299 , pp. 853
- Ten Heggeler-Bordier, B.¹ Muller, S.² Monestier, M.³ Wahli, W.⁴

30
- 65349193664
- L. Mollazadeh-Beidokhti, F. Mohammad-Rafiee, and H. Schiessel, Biophys. J. (to be published).
- Mollazadeh-Beidokhti, L.¹ Mohammad-Rafiee, F.² Schiessel, H.³

31
- 33745774997
- 10.1038/nphys344
- U. F. Keyser, B. N. Koeleman, S. van Dorp, D. Krapf, R. M. M. Smeets, S. G. Lemay, N. H. Dekker, and C. Dekker, Nat. Phys. 2, 473 (2006). 10.1038/nphys344
- (2006) Nat. Phys. , vol.2 , pp. 473
- Keyser, U.F.¹ Koeleman, B.N.² Van Dorp, S.³ Krapf, D.⁴ Smeets, R.M.M.⁵ Lemay, S.G.⁶ Dekker, N.H.⁷ Dekker, C.⁸

32
- 36749025645
- 10.1038/nmeth1126
- M. C. Noom, B. van den Broek, J. van Mameren, and G. J. L. Wuite, Nat. Methods 4, 1031 (2007). 10.1038/nmeth1126
- (2007) Nat. Methods , vol.4 , pp. 1031
- Noom, M.C.¹ Van Den Broek, B.² Van Mameren, J.³ Wuite, G.J.L.⁴

33
- 0004116989
- 2nd ed. (MIT Press, Cambridge, MA/ McGraw-Hill, New York
- T. H. Cormen, C. E. Leiserson, R. L. Rivest, and C. Stein, Introduction to Algorithms, 2nd ed. (MIT Press, Cambridge, MA/ McGraw-Hill, New York, 1990).
- (1990) Introduction to Algorithms
- Cormen, T.H.¹ Leiserson, C.E.² Rivest, R.L.³ Stein, C.⁴

34
- 33645429016
- 10.1021/j100540a008
- D. T. Gillespie, J. Phys. Chem. 81, 2340 (1977). 10.1021/j100540a008
- (1977) J. Phys. Chem. , vol.81 , pp. 2340
- Gillespie, D.T.¹

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