Erratum: A genomewide survey on basic helix-loop-helix transcription factors in rat and mouse (Mammalian Genome (2009) 20:4 (236-246) DOI: 10.1007/s00335-009-9176-7);A genome-wide survey on basic helix-loop-helix transcription factors in rat and mouse

Mammalian Genome

Volumn 20, Issue 4, 2009, Pages 236-246

  Zheng, X ^a   Wang, Y ^a   Yao, Q ^a   Yang, Z ^a   Chen, K ^a  

^a JIANGSU UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

HELIX LOOP HELIX PROTEIN;

ARTICLE; CONTROLLED STUDY; GENE; GENE DUPLICATION; GENETIC TRANSCRIPTION; GENOME ANALYSIS; MOUSE; MXIL GENE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; RAT; UNINDEXED SEQUENCE;

ANIMALIA; INVERTEBRATA; MAMMALIA; RATTUS; VERTEBRATA;

AMINO ACID SEQUENCE; ANIMALS; BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTORS; CHROMOSOME MAPPING; EVOLUTION, MOLECULAR; GENE DUPLICATION; GENOME; HUMANS; MICE; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; PHYLOGENY; RATS; SEQUENCE ALIGNMENT;

EID: 64949151123     PISSN: 09388990     EISSN: 14321777     Source Type: Journal    
DOI: 10.1007/s00335-009-9196-3     Document Type: Erratum

References (18)

1. WR Atchley W Terhalle A Dress 1999 Positional dependence, cliques, and predictive motifs in the bHLH protein domain J Mol Evol 48 5 501 516
2. MJ Buck WR Atchley 2003 Phylogenetic analysis of plant basic helix-loop-helix proteins J Mol Evol 56 6 742 750
3. AR Ferre-D'Amare GC Prendergast EB Ziff SK Burley 1993 Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain Nature 363 6424 38 45
4. DT Jones WR Taylor JM Thornton 1992 The rapid generation of mutation data matrices from protein sequences Comput Appl Sci 8 275 282
5. V Ledent M Vervoort 2001 The basic helix-loop-helix protein family: comparative genomics and phylogenetic analysis Genome Res 11 5 754 770
6. Ledent V, Paquet O, Vervoort M (2002) Phylogenetic analysis of the human basic helix-loop-helix proteins. Genome Biol 3(6):RESEARCH0030
7. X Li X Duan H Jiang Y Sun Y Tang 2006 Genome-wide analysis of basic helix-loop-helix transcription factor family in rice and Arabidopsis Plant Physiol 141 4 1167 1184
8. ME Massari C Murre 2000 Helix-loop-helix proteins: regulators of transcription in eucaryotic organisms Mol Cell Biol 20 2 429 440
9. EM Morrow T Furukawa JE Lee CL Cepko 1999 NeuroD regulates multiple functions in the developing neural retina in rodent Development 126 1 23 36
10. Nicholas KB, Nicholas HB Jr, Deerfield-II DW (1997) GeneDoc: analysis and visualization of genetic variation. Embnet News 4:14
11. Y Satou KS Imai L Yamada Y Kohara D Rokhsar 2003 A genomewide survey of developmentally relevant genes in Ciona intestinalis. I. Genes for bHLH transcription factors Dev Genes Evol 213 5-6 213 221
12. HA Schmidt K Strimmer M Vingron A von Haeseler 2002 TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing Bioinformatics 18 502 504
13. E Simionato V Ledent G Richards M Thomas-Chollier P Kerner 2007 Origin and diversification of the basic helix-loop-helix gene family in metazoans: insights from comparative genomics BMC Evol Biol 7 33
14. HJ Stewart G Zoidl M Rossner A Brennan C Zoidl 1997 Helix-loop-helix proteins in Schwann cells: a study of regulation and subcellular localization of Ids, REB, and E12/47 during embryonic and postnatal development J Neurosci Res 50 5 684 701
15. Swofford DL (1998) PAUP Phylogenetic analysis using parsimony, Version 4. Sinauer Associates, Sunderland, MA
16. G Toledo-Ortiz E Huq PH Quail 2003 The Arabidopsis basic/helix-loop-helix transcription factor family Plant Cell 15 8 1749 1770
17. Y Wang KP Chen Q Yao W Wang Z Zhi 2007 The basic helix-loop-helix transcription factor family in Bombyx mori Dev Genes Evol 217 10 715 723
18. Wang Y, Chen KP, Yao Q, Wang WB, Zhu Z (2008) The basic helix-loop-helix transcription factor family in the honeybee, Apis mellifera. J Insect Sci 8(44)