-
1
-
-
0034103005
-
Uncoupling protein homologs: emerging views of physiological function
-
Adams S.H. Uncoupling protein homologs: emerging views of physiological function. J. Nutr. 130 (2000) 711-714
-
(2000)
J. Nutr.
, vol.130
, pp. 711-714
-
-
Adams, S.H.1
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25 (1997) 3389-3402
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
33846040633
-
GenBank
-
Benson D.A., Karsch-Mizrachi I., Lipman D.J., Ostell J., and Wheeler D.L. GenBank. Nucleic Acids Res. 35 (2007) D21-25
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Wheeler, D.L.5
-
4
-
-
33750577390
-
Effects of cadmium exposure on mitochondrial function are modulated by acclimation temperature in eastern oysters Crassostrea virginica Gmelin (Bivalvia: Ostreidae)
-
Cherkasov A.S., Ringwood A.H., and Sokolova I.M. Effects of cadmium exposure on mitochondrial function are modulated by acclimation temperature in eastern oysters Crassostrea virginica Gmelin (Bivalvia: Ostreidae). Environ. Toxicol. Chem. 25 (2006) 2461-2469
-
(2006)
Environ. Toxicol. Chem.
, vol.25
, pp. 2461-2469
-
-
Cherkasov, A.S.1
Ringwood, A.H.2
Sokolova, I.M.3
-
5
-
-
33646402061
-
Effects of acclimation temperature and cadmium exposure on cellular energy budgets in a marine mollusk Crassostrea virginica: linking cellular and mitochondrial responses
-
Cherkasov A.S., Biswas P.K., Ridings D.M., Ringwood A.H., and Sokolova I.M. Effects of acclimation temperature and cadmium exposure on cellular energy budgets in a marine mollusk Crassostrea virginica: linking cellular and mitochondrial responses. J. Exp. Biol. 209 (2006) 1274-1284
-
(2006)
J. Exp. Biol.
, vol.209
, pp. 1274-1284
-
-
Cherkasov, A.S.1
Biswas, P.K.2
Ridings, D.M.3
Ringwood, A.H.4
Sokolova, I.M.5
-
6
-
-
33846500763
-
Temperature-dependent effects of cadmium and purine nucleotides on mitochondrial aconitase from a marine ectotherm, Crassostrea virginica: a role of temperature in oxidative stress and allosteric enzyme regulation
-
Cherkasov A.S., Overton Jr. R.A., Sokolov E.P., and Sokolova I.M. Temperature-dependent effects of cadmium and purine nucleotides on mitochondrial aconitase from a marine ectotherm, Crassostrea virginica: a role of temperature in oxidative stress and allosteric enzyme regulation. J. Exp. Biol. 210 (2007) 46-55
-
(2007)
J. Exp. Biol.
, vol.210
, pp. 46-55
-
-
Cherkasov, A.S.1
Overton Jr., R.A.2
Sokolov, E.P.3
Sokolova, I.M.4
-
7
-
-
0042160141
-
The role of uncoupling proteins in the regulation of metabolism
-
Erlanson-Albertsson C. The role of uncoupling proteins in the regulation of metabolism. Acta Physiol. Scand. 178 (2003) 405-412
-
(2003)
Acta Physiol. Scand.
, vol.178
, pp. 405-412
-
-
Erlanson-Albertsson, C.1
-
8
-
-
0000461280
-
Confidence limits on phylogenies: an approach using the bootstrap
-
Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39 (1985) 783-791
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
9
-
-
20444382026
-
Hyperoxia-mediated oxidative stress increases expression of UCP3 mRNA and protein in skeletal muscle
-
Flandin P., Donati Y., Barazzone-Argiroffo C., and Muzzin P. Hyperoxia-mediated oxidative stress increases expression of UCP3 mRNA and protein in skeletal muscle. FEBS Lett. 579 (2005) 3411-3415
-
(2005)
FEBS Lett.
, vol.579
, pp. 3411-3415
-
-
Flandin, P.1
Donati, Y.2
Barazzone-Argiroffo, C.3
Muzzin, P.4
-
10
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., and Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52 (2003) 696-704
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
11
-
-
33846039019
-
Ensembl 2007
-
Hubbard T.J., Aken B.L., Beal K., Ballester B., Caccamo M., Chen Y., Clarke L., Coates G., Cunningham F., Cutts T., Down T., Dyer S.C., Fitzgerald S., Fernandez-Banet J., Graf S., Haider S., Hammond M., Herrero J., Holland R., Howe K., Johnson N., Kahari A., Keefe D., Kokocinski F., Kulesha E., Lawson D., Longden I., Melsopp C., Megy K., Meidl P., Ouverdin B., Parker A., Prlic A., Rice S., Rios D., Schuster M., Sealy I., Severin J., Slater G., Smedley D., Spudich G., Trevanion S., Vilella A., Vogel J., White S., Wood M., Cox T., Curwen V., Durbin R., Fernandez-Suarez X.M., Flicek P., Kasprzyk A., Proctor G., Searle S., Smith J., Ureta-Vidal A., and Birney E. Ensembl 2007. Nucleic Acids Res. 35 (2007) D610-617
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Hubbard, T.J.1
Aken, B.L.2
Beal, K.3
Ballester, B.4
Caccamo, M.5
Chen, Y.6
Clarke, L.7
Coates, G.8
Cunningham, F.9
Cutts, T.10
Down, T.11
Dyer, S.C.12
Fitzgerald, S.13
Fernandez-Banet, J.14
Graf, S.15
Haider, S.16
Hammond, M.17
Herrero, J.18
Holland, R.19
Howe, K.20
Johnson, N.21
Kahari, A.22
Keefe, D.23
Kokocinski, F.24
Kulesha, E.25
Lawson, D.26
Longden, I.27
Melsopp, C.28
Megy, K.29
Meidl, P.30
Ouverdin, B.31
Parker, A.32
Prlic, A.33
Rice, S.34
Rios, D.35
Schuster, M.36
Sealy, I.37
Severin, J.38
Slater, G.39
Smedley, D.40
Spudich, G.41
Trevanion, S.42
Vilella, A.43
Vogel, J.44
White, S.45
Wood, M.46
Cox, T.47
Curwen, V.48
Durbin, R.49
Fernandez-Suarez, X.M.50
Flicek, P.51
Kasprzyk, A.52
Proctor, G.53
Searle, S.54
Smith, J.55
Ureta-Vidal, A.56
Birney, E.57
more..
-
12
-
-
43049179780
-
Effects of cadmium exposure on expression and activity of P-glycoprotein in eastern oysters, Crassostrea virginica Gmelin
-
Ivanina A.V., and Sokolova I.M. Effects of cadmium exposure on expression and activity of P-glycoprotein in eastern oysters, Crassostrea virginica Gmelin. Aquat. Toxicol. 88 (2008) 19-28
-
(2008)
Aquat. Toxicol.
, vol.88
, pp. 19-28
-
-
Ivanina, A.V.1
Sokolova, I.M.2
-
13
-
-
2342605549
-
Mitochondrial uncoupling proteins - facts and fantasies
-
Jezek P., Zackova M., Ruzicka M., Skobisova E., and Jaburek M. Mitochondrial uncoupling proteins - facts and fantasies. Physiol. Res. 53 Suppl. 1 (2004) S199-S211
-
(2004)
Physiol. Res.
, vol.53
, Issue.SUPPL. 1
-
-
Jezek, P.1
Zackova, M.2
Ruzicka, M.3
Skobisova, E.4
Jaburek, M.5
-
14
-
-
0026691182
-
The rapid generation of mutation data matrices from protein sequences
-
Jones D.T., Taylor W.R., and Thornton J.M. The rapid generation of mutation data matrices from protein sequences. Comput. Appl. Biosci. 8 (1992) 275-282
-
(1992)
Comput. Appl. Biosci.
, vol.8
, pp. 275-282
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
15
-
-
45849154166
-
An improved general amino acid replacement matrix
-
Le S.Q., and Gascuel O. An improved general amino acid replacement matrix. Mol. Biol. Evol. 25 (2008) 1307-1320
-
(2008)
Mol. Biol. Evol.
, vol.25
, pp. 1307-1320
-
-
Le, S.Q.1
Gascuel, O.2
-
17
-
-
33749142720
-
Thermal sensitivity of uncoupling protein expression in polar and temperate fish
-
Mark F.C., Lucassen M., and Pörtner H.O. Thermal sensitivity of uncoupling protein expression in polar and temperate fish. Comp. Biochem. Phys. D 1 (2006) 365
-
(2006)
Comp. Biochem. Phys. D
, vol.1
, pp. 365
-
-
Mark, F.C.1
Lucassen, M.2
Pörtner, H.O.3
-
18
-
-
3242891684
-
DIALIGN: multiple DNA and protein sequence alignment at BiBiServ
-
Morgenstern B. DIALIGN: multiple DNA and protein sequence alignment at BiBiServ. Nucleic Acids Res. 32 (2004) W33-36
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Morgenstern, B.1
-
19
-
-
0031854952
-
DIALIGN: finding local similarities by multiple sequence alignment
-
Morgenstern B., Frech K., Dress A., and Werner T. DIALIGN: finding local similarities by multiple sequence alignment. Bioinformatics 14 (1998) 290-294
-
(1998)
Bioinformatics
, vol.14
, pp. 290-294
-
-
Morgenstern, B.1
Frech, K.2
Dress, A.3
Werner, T.4
-
21
-
-
17344392308
-
A new mathematical model for relative quantification in real-time RT-PCR
-
Pfaffl M.W. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29 (2001) 2002-2007
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 2002-2007
-
-
Pfaffl, M.W.1
-
22
-
-
64649105102
-
Oxygen and oxidative stress modulate the expression of uncoupling protein-5 in vitro and in vivo
-
Thorniley M., Harrison D.K., and James P.E. (Eds)
-
Pichiule P., Chavez J.C., and LaManna J.C. Oxygen and oxidative stress modulate the expression of uncoupling protein-5 in vitro and in vivo. In: Thorniley M., Harrison D.K., and James P.E. (Eds). Oxygen Transport to Tissue, vol. XXV, by the International Society on Oxygen Transport to Tissue Meeting (2004)
-
(2004)
Oxygen Transport to Tissue, vol. XXV, by the International Society on Oxygen Transport to Tissue Meeting
-
-
Pichiule, P.1
Chavez, J.C.2
LaManna, J.C.3
-
23
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
24
-
-
0026660413
-
A simple method for estimating and testing minimum-evolution trees
-
Rzhetsky A., and Nei M. A simple method for estimating and testing minimum-evolution trees. Mol. Biol. Evol. 9 (1992) 945-967
-
(1992)
Mol. Biol. Evol.
, vol.9
, pp. 945-967
-
-
Rzhetsky, A.1
Nei, M.2
-
25
-
-
33645243792
-
Involvement of Drosophila uncoupling protein 5 in metabolism and aging
-
Sánchez-Blanco A., Fridell Y.W., and Helfand S.L. Involvement of Drosophila uncoupling protein 5 in metabolism and aging. Genetics 172 (2006) 1699-1710
-
(2006)
Genetics
, vol.172
, pp. 1699-1710
-
-
Sánchez-Blanco, A.1
Fridell, Y.W.2
Helfand, S.L.3
-
26
-
-
0032545458
-
BMCP1, a novel mitochondrial carrier with high expression in the central nervous system of humans and rodents, and respiration uncoupling activity in recombinant yeast
-
Sanchis D., Fleury C., Chomiki N., Goubern M., Huang Q., Neverova M., Gregoire F., Easlick J., Raimbault S., Lévi-Meyrueis C., Miroux B., Collins S., Seldin M., Richard D., Warden C., Bouillaud F., and Ricquier D. BMCP1, a novel mitochondrial carrier with high expression in the central nervous system of humans and rodents, and respiration uncoupling activity in recombinant yeast. J. Biol. Chem. 273 (1998) 34611-34615
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 34611-34615
-
-
Sanchis, D.1
Fleury, C.2
Chomiki, N.3
Goubern, M.4
Huang, Q.5
Neverova, M.6
Gregoire, F.7
Easlick, J.8
Raimbault, S.9
Lévi-Meyrueis, C.10
Miroux, B.11
Collins, S.12
Seldin, M.13
Richard, D.14
Warden, C.15
Bouillaud, F.16
Ricquier, D.17
-
27
-
-
0036205377
-
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
-
Schmidt H.A., Strimmer K., Vingron M., and von Haeseler A. TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18 (2002) 502-504
-
(2002)
Bioinformatics
, vol.18
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
von Haeseler, A.4
-
28
-
-
0032564864
-
Uncoupling: new approaches to an old problem of bioenergetics
-
Skulachev V.P. Uncoupling: new approaches to an old problem of bioenergetics. Biochim. Biophys. Acta 1363 (1998) 100-124
-
(1998)
Biochim. Biophys. Acta
, vol.1363
, pp. 100-124
-
-
Skulachev, V.P.1
-
29
-
-
11844255438
-
Evolution of mitochondrial uncoupling proteins: novel invertebrate UCP homologues suggest early evolutionary divergence of the UCP family
-
Sokolova I.M., and Sokolov E.P. Evolution of mitochondrial uncoupling proteins: novel invertebrate UCP homologues suggest early evolutionary divergence of the UCP family. FEBS Lett. 579 (2005) 313-317
-
(2005)
FEBS Lett.
, vol.579
, pp. 313-317
-
-
Sokolova, I.M.1
Sokolov, E.P.2
-
30
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura K., Dudley J., Nei M., and Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24 (2007) 1596-1599
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
31
-
-
0032964297
-
BLAST 2 sequences, a new tool for comparing protein and nucleotide sequences
-
Tatusova T.A., and Madden T.L. BLAST 2 sequences, a new tool for comparing protein and nucleotide sequences. FEMS Microbiol. Lett. 174 (1999) 247-250
-
(1999)
FEMS Microbiol. Lett.
, vol.174
, pp. 247-250
-
-
Tatusova, T.A.1
Madden, T.L.2
-
32
-
-
30444455604
-
Oxygenation during hypothermic rat liver preservation: an in vitro slice study to demonstrate beneficial or toxic oxygenation effects
-
't Hart N.A., van der Plaats A., Faber A., Leuvenink H.G., Olinga P., Wiersema-Buist J., Verkerke G.J., Rakhorst G., and Ploeg R.J. Oxygenation during hypothermic rat liver preservation: an in vitro slice study to demonstrate beneficial or toxic oxygenation effects. Liver Transplant. 11 (2005) 1403-1411
-
(2005)
Liver Transplant.
, vol.11
, pp. 1403-1411
-
-
't Hart, N.A.1
van der Plaats, A.2
Faber, A.3
Leuvenink, H.G.4
Olinga, P.5
Wiersema-Buist, J.6
Verkerke, G.J.7
Rakhorst, G.8
Ploeg, R.J.9
-
33
-
-
0035031966
-
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
-
Whelan S., and Goldman N. A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol. Biol. Evol. 18 (2001) 691-699
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 691-699
-
-
Whelan, S.1
Goldman, N.2
-
34
-
-
0036241814
-
Monitoring changes in gene expression in renal ischemia-reperfusion in the rat
-
Yoshida T., Kurella M., Beato F., Min H., Ingelfinger J.R., Stears R.L., Swinford R.D., Gullans S.R., and Tang S.S. Monitoring changes in gene expression in renal ischemia-reperfusion in the rat. Kidney Int. 61 (2002) 1646-1654
-
(2002)
Kidney Int.
, vol.61
, pp. 1646-1654
-
-
Yoshida, T.1
Kurella, M.2
Beato, F.3
Min, H.4
Ingelfinger, J.R.5
Stears, R.L.6
Swinford, R.D.7
Gullans, S.R.8
Tang, S.S.9
-
35
-
-
0033899544
-
Characterization of novel UCP5/BMCP1 isoforms and differential regulation of UCP4 and UCP5 expression through dietary or temperature manipulation
-
Yu X.X., Weiguang M., Zhong A., Schow P., Brush J., Sherwood S.W., Adams S.H., and Pan G. Characterization of novel UCP5/BMCP1 isoforms and differential regulation of UCP4 and UCP5 expression through dietary or temperature manipulation. FASEB J. 14 (2000) 1611-1618
-
(2000)
FASEB J.
, vol.14
, pp. 1611-1618
-
-
Yu, X.X.1
Weiguang, M.2
Zhong, A.3
Schow, P.4
Brush, J.5
Sherwood, S.W.6
Adams, S.H.7
Pan, G.8
|