-
1
-
-
1942470550
-
Crystal structure and functional analysis of the eukaryotic class II release factor eRF3 from S. pombe
-
Kong,C., Ito,K., Walsh,M.A., Wada,M., Liu,Y., Kumar,S., Barford,D., Nakamura,Y. and Song,H. (2004) Crystal structure and functional analysis of the eukaryotic class II release factor eRF3 from S. pombe. Mol. Cell, 14, 233-245.
-
(2004)
Mol. Cell
, vol.14
, pp. 233-245
-
-
Kong, C.1
Ito, K.2
Walsh, M.A.3
Wada, M.4
Liu, Y.5
Kumar, S.6
Barford, D.7
Nakamura, Y.8
Song, H.9
-
2
-
-
0034603210
-
The crystal structure of human eukaryotic release factor eRF1 - mechanism of stop codon recognition and peptidyl-tRNA hydrolysis
-
Song,H., Mugnier,P., Das,A.K., Webb,H.M., Evans,D.R., Tuite,M.F., Hemmings,B.A. and Barford,D. (2000) The crystal structure of human eukaryotic release factor eRF1 - mechanism of stop codon recognition and peptidyl-tRNA hydrolysis. Cell, 100, 311-321.
-
(2000)
Cell
, vol.100
, pp. 311-321
-
-
Song, H.1
Mugnier, P.2
Das, A.K.3
Webb, H.M.4
Evans, D.R.5
Tuite, M.F.6
Hemmings, B.A.7
Barford, D.8
-
3
-
-
0033827056
-
Terminating eukaryote translation: Domain 1 of release factor eRF1 functions in stop codon recognition
-
Bertram,G., Bell,H.A., Ritchie,D.W., Fullerton,G. and Stansfield,I. (2000) Terminating eukaryote translation: Domain 1 of release factor eRF1 functions in stop codon recognition. RNA, 6, 1236-1247.
-
(2000)
RNA
, vol.6
, pp. 1236-1247
-
-
Bertram, G.1
Bell, H.A.2
Ritchie, D.W.3
Fullerton, G.4
Stansfield, I.5
-
4
-
-
44449153482
-
Distinct eRF3 requirements suggest alternate eRF1 conformations mediate peptide release during eukaryotic translation termination
-
Fan-Minogue,H., Du,M., Pisarev,A.V., Kallmeyer,A.K., Salas-Marco,J., Keeling,K.M., Thompson,S.R., Pestova,T.V. and Bedwell,D.M. (2008) Distinct eRF3 requirements suggest alternate eRF1 conformations mediate peptide release during eukaryotic translation termination. Mol. Cell 30, 599-609.
-
(2008)
Mol. Cell
, vol.30
, pp. 599-609
-
-
Fan-Minogue, H.1
Du, M.2
Pisarev, A.V.3
Kallmeyer, A.K.4
Salas-Marco, J.5
Keeling, K.M.6
Thompson, S.R.7
Pestova, T.V.8
Bedwell, D.M.9
-
5
-
-
0036747332
-
Conversion of omnipotent translation termination factor eRF1 into ciliate-like UGA-only unipotent eRF1
-
Seit-Nebi,A., Frolova,L. and Kisselev,L. (2002) Conversion of omnipotent translation termination factor eRF1 into ciliate-like UGA-only unipotent eRF1. EMBO Rep., 3, 881-886.
-
(2002)
EMBO Rep
, vol.3
, pp. 881-886
-
-
Seit-Nebi, A.1
Frolova, L.2
Kisselev, L.3
-
6
-
-
0032937983
-
The C-terminus of eRF1 defines a functionally important domain for translation termination in Saccharomyces cerevisiae
-
Eurwilaichitr,L., Graves,F.M., Stansfield,I. and Tuite,M.F. (1999) The C-terminus of eRF1 defines a functionally important domain for translation termination in Saccharomyces cerevisiae. Mol. Microbiol. 32, 485-496.
-
(1999)
Mol. Microbiol
, vol.32
, pp. 485-496
-
-
Eurwilaichitr, L.1
Graves, F.M.2
Stansfield, I.3
Tuite, M.F.4
-
7
-
-
33845992204
-
Kinetic analysis of interaction of eukaryotic release factor 3 with guanine nucleotides
-
Pisareva,V.P., Pisarev,A.V., Hellen,C.U., Rodnina,M.V. and Pestova,T.V. (2006) Kinetic analysis of interaction of eukaryotic release factor 3 with guanine nucleotides. J. Biol. Chem., 281, 40224-40235.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 40224-40235
-
-
Pisareva, V.P.1
Pisarev, A.V.2
Hellen, C.U.3
Rodnina, M.V.4
Pestova, T.V.5
-
8
-
-
4344677977
-
GTP hydrolysis by eRF3 facilitates stop codon decoding during eukaryotic translation termination
-
Salas-Marco,J. and Bedwell,D.M. (2004) GTP hydrolysis by eRF3 facilitates stop codon decoding during eukaryotic translation termination. Mol. Cell Biol., 24, 7769-7778.
-
(2004)
Mol. Cell Biol
, vol.24
, pp. 7769-7778
-
-
Salas-Marco, J.1
Bedwell, D.M.2
-
9
-
-
33744993160
-
In vitro reconstitution of eukaryotic translation reveals cooperativity between release factors eRF1 and eRF3
-
Alkalaeva,E.Z., Pisarev,A.V., Frolova,L.Y., Kisselev,L.L. and Pestova,T.V. (2006) In vitro reconstitution of eukaryotic translation reveals cooperativity between release factors eRF1 and eRF3. Cell, 125, 1125-1136.
-
(2006)
Cell
, vol.125
, pp. 1125-1136
-
-
Alkalaeva, E.Z.1
Pisarev, A.V.2
Frolova, L.Y.3
Kisselev, L.L.4
Pestova, T.V.5
-
10
-
-
0035476654
-
Class-1 translation termination factors: Invariant GGQ minidomain is essential for release activity and ribosome binding but not for stop codon recognition
-
Seit-Nebi,A., Frolova,L., Justesen,J. and Kisselev,L. (2001) Class-1 translation termination factors: Invariant GGQ minidomain is essential for release activity and ribosome binding but not for stop codon recognition. Nucleic Acids Res., 29, 3982-3987.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 3982-3987
-
-
Seit-Nebi, A.1
Frolova, L.2
Justesen, J.3
Kisselev, L.4
-
11
-
-
28544432926
-
Invariant amino acids essential for decoding function of polypeptide release factor eRF1
-
Kolosov,P., Frolova,L., Seit-Nebi,A., Dubovaya,V., Kononenko,A., Oparina,N., Justesen,J., Efimov,A. and Kisselev,L. (2005) Invariant amino acids essential for decoding function of polypeptide release factor eRF1. Nucleic Acids Res., 33, 6418-6425.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 6418-6425
-
-
Kolosov, P.1
Frolova, L.2
Seit-Nebi, A.3
Dubovaya, V.4
Kononenko, A.5
Oparina, N.6
Justesen, J.7
Efimov, A.8
Kisselev, L.9
-
12
-
-
0037173091
-
Omnipotent decoding potential resides in eukaryotic translation termination factor eRF1 of variant-code organisms and is modulated by the interactions of amino acid sequences within domain 1
-
Ito,K., Frolova,L., Seit-Nebi,A., Karamyshev,A., Kisselev,L. and Nakamura,Y. (2002) Omnipotent decoding potential resides in eukaryotic translation termination factor eRF1 of variant-code organisms and is modulated by the interactions of amino acid sequences within domain 1. Proc. Natl Acad. Sci. USA, 99, 8494-8499.
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 8494-8499
-
-
Ito, K.1
Frolova, L.2
Seit-Nebi, A.3
Karamyshev, A.4
Kisselev, L.5
Nakamura, Y.6
-
13
-
-
0036216442
-
Highly conserved NIKS tetrapeptide is functionally essential in eukaryotic translation termination factor eRF1
-
Frolova,L., Seit-Nebi,A. and Kisselev,L. (2002) Highly conserved NIKS tetrapeptide is functionally essential in eukaryotic translation termination factor eRF1. RNA, 8, 129-136.
-
(2002)
RNA
, vol.8
, pp. 129-136
-
-
Frolova, L.1
Seit-Nebi, A.2
Kisselev, L.3
-
14
-
-
0345146926
-
Stop codon selection in eukaryotic translation termination: Comparison of the discriminating potential between human and ciliate eRF1s
-
Chavatte,L., Kervestin,S., Favre,A. and Jean-Jean,O. (2003) Stop codon selection in eukaryotic translation termination: Comparison of the discriminating potential between human and ciliate eRF1s. EMBO J., 22, 1644-1653.
-
(2003)
EMBO J
, vol.22
, pp. 1644-1653
-
-
Chavatte, L.1
Kervestin, S.2
Favre, A.3
Jean-Jean, O.4
-
15
-
-
0028132216
-
Codon context and protein synthesis: Enhancements of the genetic code
-
Buckingham,R.H. (1994) Codon context and protein synthesis: Enhancements of the genetic code. Biochimie, 76, 351-354.
-
(1994)
Biochimie
, vol.76
, pp. 351-354
-
-
Buckingham, R.H.1
-
16
-
-
0035581083
-
Misreading of termination codons in eukaryotes by natural nonsense suppressor tRNAs
-
Beier,H. and Grimm,M. (2001) Misreading of termination codons in eukaryotes by natural nonsense suppressor tRNAs. Nucleic Acids Res. 29, 4767-4782.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 4767-4782
-
-
Beier, H.1
Grimm, M.2
-
17
-
-
0034779875
-
Impact of the six nucleotides downstream of the stop codon on translation termination
-
Namy,O., Hatin,I. and Rousset,J.P. (2001) Impact of the six nucleotides downstream of the stop codon on translation termination. EMBO Rep. 2, 787-793.
-
(2001)
EMBO Rep
, vol.2
, pp. 787-793
-
-
Namy, O.1
Hatin, I.2
Rousset, J.P.3
-
18
-
-
0020529962
-
Transformation of intact yeast cells treated with alkali cations
-
Ito,H., Fukuda,Y., Murata,K. and Kimura,A. (1983) Transformation of intact yeast cells treated with alkali cations. J. Bacteriol., 153, 163-168.
-
(1983)
J. Bacteriol
, vol.153
, pp. 163-168
-
-
Ito, H.1
Fukuda, Y.2
Murata, K.3
Kimura, A.4
-
19
-
-
0029070954
-
Versatile vectors to study recoding: Conservation of rules between yeast and mammalian cells
-
Stahl,G., Bidou,L., Rousset,J.P. and Cassan,M. (1995) Versatile vectors to study recoding: Conservation of rules between yeast and mammalian cells. Nucleic Acids Res., 23, 1557-1560.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 1557-1560
-
-
Stahl, G.1
Bidou, L.2
Rousset, J.P.3
Cassan, M.4
-
20
-
-
0021528060
-
Hyper-accurate ribosomes inhibit growth
-
Ruusala,T., Andersson,D., Ehrenberg,M. and Kurland,C.G. (1984) Hyper-accurate ribosomes inhibit growth. EMBO J., 3, 2575-2580.
-
(1984)
EMBO J
, vol.3
, pp. 2575-2580
-
-
Ruusala, T.1
Andersson, D.2
Ehrenberg, M.3
Kurland, C.G.4
-
21
-
-
0029992246
-
Depletion in the levels of the release factor eRF1 causes a reduction in the efficiency of translation termination in yeast
-
Stansfield,I., Eurwilaichitr,L., Akhmaloka and Tuite,M.F. (1996) Depletion in the levels of the release factor eRF1 causes a reduction in the efficiency of translation termination in yeast. Mol. Microbiol. 20, 1135-1143.
-
(1996)
Mol. Microbiol
, vol.20
, pp. 1135-1143
-
-
Stansfield, I.1
Eurwilaichitr2
Akhmaloka, L.3
Tuite, M.F.4
-
22
-
-
37249035070
-
Fine-tuning of translation termination efficiency in Saccharomyces cerevisiae involves two factors in close proximity to the exit tunnel of the ribosome
-
Hatin,I., Fabret,C., Namy,O., Decatur,W.A. and Rousset,J.P. (2007) Fine-tuning of translation termination efficiency in Saccharomyces cerevisiae involves two factors in close proximity to the exit tunnel of the ribosome. Genetics, 177, 1527-1537.
-
(2007)
Genetics
, vol.177
, pp. 1527-1537
-
-
Hatin, I.1
Fabret, C.2
Namy, O.3
Decatur, W.A.4
Rousset, J.P.5
-
23
-
-
0035989360
-
Gene overexpression as a tool for identifying new trans-acting factors involved in translation termination in Saccharomyces cerevisiae
-
Namy,O., Hatin,I., Stahl,G., Liu,H., Barnay,S., Bidou,L. and Rousset,J.P. (2002) Gene overexpression as a tool for identifying new trans-acting factors involved in translation termination in Saccharomyces cerevisiae. Genetics, 161, 585-594.
-
(2002)
Genetics
, vol.161
, pp. 585-594
-
-
Namy, O.1
Hatin, I.2
Stahl, G.3
Liu, H.4
Barnay, S.5
Bidou, L.6
Rousset, J.P.7
-
24
-
-
0033942924
-
Nonsense-mediated decay mutants do not affect programmed -1 frameshifting
-
Bidou,L., Stahl,G., Hatin,I., Namy,O., Rousset,J.P. and Farabaugh,P.J. (2000) Nonsense-mediated decay mutants do not affect programmed -1 frameshifting. RNA, 6, 952-961.
-
(2000)
RNA
, vol.6
, pp. 952-961
-
-
Bidou, L.1
Stahl, G.2
Hatin, I.3
Namy, O.4
Rousset, J.P.5
Farabaugh, P.J.6
-
25
-
-
0036792666
-
The invariant uridine of stop codons contacts the conserved NIKSR loop of human eRF1 in the ribosome
-
Chavatte,L., Seit-Nebi,A., Dubovaya,V. and Favre,A. (2002) The invariant uridine of stop codons contacts the conserved NIKSR loop of human eRF1 in the ribosome. EMBO J., 21, 5302-5311.
-
(2002)
EMBO J
, vol.21
, pp. 5302-5311
-
-
Chavatte, L.1
Seit-Nebi, A.2
Dubovaya, V.3
Favre, A.4
-
26
-
-
0032840382
-
Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis
-
Frolova,L.Y., Tsivkovskii,R.Y., Sivolobova,G.F., Oparina,N.Y., Serpinsky,O.I., Blinov,V.M., Tatkov,S.I. and Kisselev,L.L. (1999) Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis. RNA, 5, 1014-1020.
-
(1999)
RNA
, vol.5
, pp. 1014-1020
-
-
Frolova, L.Y.1
Tsivkovskii, R.Y.2
Sivolobova, G.F.3
Oparina, N.Y.4
Serpinsky, O.I.5
Blinov, V.M.6
Tatkov, S.I.7
Kisselev, L.L.8
-
27
-
-
0031857784
-
The stretch of C-terminal acidic amino acids of translational release factor eRF1 is a primary binding site for eRF3 of fission yeast
-
Ito,K., Ebihara,K. and Nakamura,Y. (1998) The stretch of C-terminal acidic amino acids of translational release factor eRF1 is a primary binding site for eRF3 of fission yeast. RNA, 4, 958-972.
-
(1998)
RNA
, vol.4
, pp. 958-972
-
-
Ito, K.1
Ebihara, K.2
Nakamura, Y.3
-
28
-
-
0034069537
-
Translation termination in eukaryotes: Polypeptide release factor eRF1 is composed of functionally and structurally distinct domains
-
Frolova,L.Y., Merkulova,T.I. and Kisselev,L.L. (2000) Translation termination in eukaryotes: Polypeptide release factor eRF1 is composed of functionally and structurally distinct domains. RNA, 6, 381-390.
-
(2000)
RNA
, vol.6
, pp. 381-390
-
-
Frolova, L.Y.1
Merkulova, T.I.2
Kisselev, L.L.3
-
29
-
-
0032969177
-
C-terminal domains of human translation termination factors eRF1 and eRF3 mediate their in vivo interaction
-
Merkulova,T.I., Frolova,L.Y., Lazar,M., Camonis,J. and Kisselev,L.L. (1999) C-terminal domains of human translation termination factors eRF1 and eRF3 mediate their in vivo interaction. FEBS Lett., 443, 41-47.
-
(1999)
FEBS Lett
, vol.443
, pp. 41-47
-
-
Merkulova, T.I.1
Frolova, L.Y.2
Lazar, M.3
Camonis, J.4
Kisselev, L.L.5
-
30
-
-
0029832599
-
A translational fidelity mutation in the universally conserved sarcin/ricin domain of 25S yeast ribosomal RNA
-
Liu,R. and Liebman,S.W. (1996) A translational fidelity mutation in the universally conserved sarcin/ricin domain of 25S yeast ribosomal RNA. RNA, 2, 254-263.
-
(1996)
RNA
, vol.2
, pp. 254-263
-
-
Liu, R.1
Liebman, S.W.2
-
31
-
-
0033862288
-
Mutations in helix 27 of the yeast Saccharomyces cerevisiae 18S rRNA affect the function of the decoding center of the ribosome
-
Velichutina,I.V., Dresios,J., Hong,J.Y., Li,C., Mankin,A., Synetos,D. and Liebman,S.W. (2000) Mutations in helix 27 of the yeast Saccharomyces cerevisiae 18S rRNA affect the function of the decoding center of the ribosome. RNA, 6, 1174-1184.
-
(2000)
RNA
, vol.6
, pp. 1174-1184
-
-
Velichutina, I.V.1
Dresios, J.2
Hong, J.Y.3
Li, C.4
Mankin, A.5
Synetos, D.6
Liebman, S.W.7
-
32
-
-
0035951295
-
Genetic interaction between yeast Saccharomyces cerevisiae release factors and the decoding region of 18 S rRNA
-
Velichutina,I.V., Hong,J.Y., Mesecar,A.D., Chernoff,Y.O. and Liebman,S.W. (2001) Genetic interaction between yeast Saccharomyces cerevisiae release factors and the decoding region of 18 S rRNA. J. Mol. Biol., 305, 715-727.
-
(2001)
J. Mol. Biol
, vol.305
, pp. 715-727
-
-
Velichutina, I.V.1
Hong, J.Y.2
Mesecar, A.D.3
Chernoff, Y.O.4
Liebman, S.W.5
-
33
-
-
11144223549
-
Release factors eRF1 and RF2: A universal mechanism controls the large conformational changes
-
Ma,B. and Nussinov,R. (2004) Release factors eRF1 and RF2: A universal mechanism controls the large conformational changes. J. Biol. Chem. 279, 53875-53885.
-
(2004)
J. Biol. Chem
, vol.279
, pp. 53875-53885
-
-
Ma, B.1
Nussinov, R.2
-
34
-
-
0035997219
-
Clinically relevant amino-glycosides can suppress disease-associated premature stop mutations in the IDUA and P53 cDNAs in a mammalian translation system
-
Keeling,K.M. and Bedwell,D.M. (2002) Clinically relevant amino-glycosides can suppress disease-associated premature stop mutations in the IDUA and P53 cDNAs in a mammalian translation system. J. Mol. Med., 80, 367-376.
-
(2002)
J. Mol. Med
, vol.80
, pp. 367-376
-
-
Keeling, K.M.1
Bedwell, D.M.2
|