메뉴 건너뛰기




Volumn 48, Issue 8, 2009, Pages 1810-1819

A succession of mechanisms stimulate efficient reconstituted HIV-1 minus strand strong stop DNA transfer

Author keywords

[No Author keywords available]

Indexed keywords

DNA TRANSFERS; DONOR ACCEPTORS; FOLDING STRUCTURES; HUMAN IMMUNODEFICIENCY VIRUS-1; IN-VITRO;

EID: 64349094431     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi802149j     Document Type: Article
Times cited : (8)

References (69)
  • 1
    • 0014964654 scopus 로고
    • RNA-dependent DNA polymerase in virions of RNA tumour viruses
    • Baltimore, D. (1970) RNA-dependent DNA polymerase in virions of RNA tumour viruses. Nature 226, 1209-1211.
    • (1970) Nature , vol.226 , pp. 1209-1211
    • Baltimore, D.1
  • 2
    • 0014964695 scopus 로고
    • RNA-dependent DNA polymerase in virions of Rous sarcoma virus
    • Temin, H. M., and Mizutani, S. (1970) RNA-dependent DNA polymerase in virions of Rous sarcoma virus. Nature 226, 1211-1213.
    • (1970) Nature , vol.226 , pp. 1211-1213
    • Temin, H.M.1    Mizutani, S.2
  • 3
    • 0002333979 scopus 로고
    • Strong-stop Strand Transfer during Reverse Transcription
    • Skalka, A. M, and Goff, S. P, Eds, pp, Cold Spring Harbor Laboratory Press, Plainview, NY
    • Telesnitsky, A., and Goff, S. P. (1993) Strong-stop Strand Transfer during Reverse Transcription. In Reverse Transcriptase (Skalka, A. M., and Goff, S. P., Eds.) pp 49-83, Cold Spring Harbor Laboratory Press, Plainview, NY.
    • (1993) Reverse Transcriptase , pp. 49-83
    • Telesnitsky, A.1    Goff, S.P.2
  • 4
    • 0002296754 scopus 로고    scopus 로고
    • Reverse Transcription and the Generation of Retroviral DNA
    • Coffin, J. M, Hughes, S. H, and Varmus, H. E, Eds, pp, Cold Spring Harbor Labortatory Press, Plainview, NY
    • Telesnitsky, A., and Goff, S. P. (1997) Reverse Transcription and the Generation of Retroviral DNA. In Retroviruses (Coffin, J. M., Hughes, S. H, and Varmus, H. E., Eds.) pp 121 - 160, Cold Spring Harbor Labortatory Press, Plainview, NY.
    • (1997) Retroviruses , pp. 121-160
    • Telesnitsky, A.1    Goff, S.P.2
  • 5
    • 23144448275 scopus 로고    scopus 로고
    • Nucleic acid chaperone activity of HIV-1 nucleocapsid protein: Critical role in reverse transcription and molecular mechanism
    • Levin, J. G., Guo, J., Rouzina, I., and Musier-Forsyth, K. (2005) Nucleic acid chaperone activity of HIV-1 nucleocapsid protein: Critical role in reverse transcription and molecular mechanism. Prog. Nucleic Acid Res. Mol. Biol. 80, 217-286.
    • (2005) Prog. Nucleic Acid Res. Mol. Biol , vol.80 , pp. 217-286
    • Levin, J.G.1    Guo, J.2    Rouzina, I.3    Musier-Forsyth, K.4
  • 6
    • 0031679786 scopus 로고    scopus 로고
    • Nucleic-acid- chaperone activity of retroviral nucleocapsid proteins: Significance for viral replication
    • Rein, A., Henderson, L. E., and Levin, J. G. (1998) Nucleic-acid- chaperone activity of retroviral nucleocapsid proteins: Significance for viral replication. Trends Biochem. Sci. 23, 297-301.
    • (1998) Trends Biochem. Sci , vol.23 , pp. 297-301
    • Rein, A.1    Henderson, L.E.2    Levin, J.G.3
  • 8
    • 0033803461 scopus 로고    scopus 로고
    • Zinc finger structures in the human immunodeficiency virus type 1 nucleocapsid protein facilitate efficient minus- and plus-strand transfer
    • Guo, J., Wu, T., Anderson, J., Kane, B. F., Johnson, D. G., Gorelick, R. J., Henderson, L. E., and Levin, J. G. (2000) Zinc finger structures in the human immunodeficiency virus type 1 nucleocapsid protein facilitate efficient minus- and plus-strand transfer. J. Virol. 74, 8980-8988.
    • (2000) J. Virol , vol.74 , pp. 8980-8988
    • Guo, J.1    Wu, T.2    Anderson, J.3    Kane, B.F.4    Johnson, D.G.5    Gorelick, R.J.6    Henderson, L.E.7    Levin, J.G.8
  • 9
    • 0036226153 scopus 로고    scopus 로고
    • Subtle alterations of the native zinc finger structures have dramatic effects on the nucleic acid chaperone activity of human immunodeficiency virus type 1 nucleocapsid protein
    • Guo, J., Wu, T., Kane, B. F., Johnson, D. G., Henderson, L. E., Gorelick, R. J., and Levin, J. G. (2002) Subtle alterations of the native zinc finger structures have dramatic effects on the nucleic acid chaperone activity of human immunodeficiency virus type 1 nucleocapsid protein. J. Virol. 76, 4370-4378.
    • (2002) J. Virol , vol.76 , pp. 4370-4378
    • Guo, J.1    Wu, T.2    Kane, B.F.3    Johnson, D.G.4    Henderson, L.E.5    Gorelick, R.J.6    Levin, J.G.7
  • 10
    • 0031547959 scopus 로고    scopus 로고
    • Possible roles of HIV-1 nucleocapsid protein in the specificity of proviral DNA synthesis and in its variability
    • Lapadat-Tapolsky, M., Gabus, C., Rau, M., and Darlix, J. L. (1997) Possible roles of HIV-1 nucleocapsid protein in the specificity of proviral DNA synthesis and in its variability. J. Mol. Biol. 268, 250-260.
    • (1997) J. Mol. Biol , vol.268 , pp. 250-260
    • Lapadat-Tapolsky, M.1    Gabus, C.2    Rau, M.3    Darlix, J.L.4
  • 11
    • 0037260333 scopus 로고    scopus 로고
    • Nucleic acid conformational changes essential for HIV-1 nucleocapsid protein-mediated inhibition of self-priming in minus-strand transfer
    • Hong, M. K., Harbron, E. J., O'Connor, D. B., Guo, J., Barbara, P. F., Levin, J. G., and Musier-Forsyth, K. (2003) Nucleic acid conformational changes essential for HIV-1 nucleocapsid protein-mediated inhibition of self-priming in minus-strand transfer. J. Mol. Biol. 325, 1-10.
    • (2003) J. Mol. Biol , vol.325 , pp. 1-10
    • Hong, M.K.1    Harbron, E.J.2    O'Connor, D.B.3    Guo, J.4    Barbara, P.F.5    Levin, J.G.6    Musier-Forsyth, K.7
  • 12
    • 0028113905 scopus 로고
    • Human immunodeficiency virus nucleocapsid protein accelerates strand transfer of the terminally redundant sequences involved in reverse transcription
    • You, J. C., and McHenry, C. S. (1994) Human immunodeficiency virus nucleocapsid protein accelerates strand transfer of the terminally redundant sequences involved in reverse transcription. J. Biol. Chem. 269, 31491-31495.
    • (1994) J. Biol. Chem , vol.269 , pp. 31491-31495
    • You, J.C.1    McHenry, C.S.2
  • 13
    • 0035172899 scopus 로고    scopus 로고
    • In vitro analysis of human immunodeficiency virus type 1 minus-strand strong-stop DNA synthesis and genomic RNA processing
    • Driscoll, M. D., Golinelli, M. P., and Hughes, S. H. (2001) In vitro analysis of human immunodeficiency virus type 1 minus-strand strong-stop DNA synthesis and genomic RNA processing. J. Virol. 75, 672-686.
    • (2001) J. Virol , vol.75 , pp. 672-686
    • Driscoll, M.D.1    Golinelli, M.P.2    Hughes, S.H.3
  • 14
    • 0033799017 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 nucleocapsid protein can prevent self-priming of minus-strand strong stop DNA by promoting the annealing of short oligonucleotides to hairpin sequences
    • Driscoll, M. D., and Hughes, S. H. (2000) Human immunodeficiency virus type 1 nucleocapsid protein can prevent self-priming of minus-strand strong stop DNA by promoting the annealing of short oligonucleotides to hairpin sequences. J. Virol. 74, 8785-8792.
    • (2000) J. Virol , vol.74 , pp. 8785-8792
    • Driscoll, M.D.1    Hughes, S.H.2
  • 15
    • 0031007620 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 nucleocapsid protein promotes efficient strand transfer and specific viral DNA synthesis by inhibiting TAR-dependent self-priming from minus-strand strong-stop DNA
    • Guo, J., Henderson, L. E., Bess, J., Kane, B., and Levin, J. G (1997) Human immunodeficiency virus type 1 nucleocapsid protein promotes efficient strand transfer and specific viral DNA synthesis by inhibiting TAR-dependent self-priming from minus-strand strong-stop DNA. J. Virol. 71, 5178-5188.
    • (1997) J. Virol , vol.71 , pp. 5178-5188
    • Guo, J.1    Henderson, L.E.2    Bess, J.3    Kane, B.4    Levin, J.G.5
  • 16
    • 84937346333 scopus 로고
    • Recombinant HIV-1 nucleocapsid protein accelerates HIV-1 reverse transcriptase catalyzed DNA strand transfer reactions and modulates RNase H activity
    • Peliska, J. A., Balasubramanian, S., Giedroc, D. P., and Benkovic, S. J. (1994) Recombinant HIV-1 nucleocapsid protein accelerates HIV-1 reverse transcriptase catalyzed DNA strand transfer reactions and modulates RNase H activity. Biochemistry 33, 13817-13823.
    • (1994) Biochemistry , vol.33 , pp. 13817-13823
    • Peliska, J.A.1    Balasubramanian, S.2    Giedroc, D.P.3    Benkovic, S.J.4
  • 17
    • 6344294990 scopus 로고    scopus 로고
    • Alteration of nucleic acid structure and stability modulates the efficiency of minus-strand transfer mediated by the HIV-1 nucleocapsid protein
    • Heilman-Miller, S. L., Wu, T., and Levin, J. G. (2004) Alteration of nucleic acid structure and stability modulates the efficiency of minus-strand transfer mediated by the HIV-1 nucleocapsid protein. J. Biol. Chem. 279, 44154-44165.
    • (2004) J. Biol. Chem , vol.279 , pp. 44154-44165
    • Heilman-Miller, S.L.1    Wu, T.2    Levin, J.G.3
  • 18
    • 0025810354 scopus 로고
    • Reverse-transcriptase-associated RNaseH activity mediates template switching during reverse transcription in vitro
    • Garces, J., and Wittek, R. (1991) Reverse-transcriptase-associated RNaseH activity mediates template switching during reverse transcription in vitro. Proc. Biol. Sci. 243, 235-239.
    • (1991) Proc. Biol. Sci , vol.243 , pp. 235-239
    • Garces, J.1    Wittek, R.2
  • 19
    • 0026448638 scopus 로고
    • Human immunodeficiency virus type 1 reverse transcriptase: Spatial and temporal relationship between the polymerase and RNase H activities
    • Gopalakrishnan, V., Peliska, J. A., and Benkovic, S. J. (1992) Human immunodeficiency virus type 1 reverse transcriptase: Spatial and temporal relationship between the polymerase and RNase H activities. Proc. Natl. Acad. Sci. U.S.A. 89, 10763-10767.
    • (1992) Proc. Natl. Acad. Sci. U.S.A , vol.89 , pp. 10763-10767
    • Gopalakrishnan, V.1    Peliska, J.A.2    Benkovic, S.J.3
  • 20
    • 0141866872 scopus 로고    scopus 로고
    • Steps of the acceptor invasion mechanism for HIV-1 minus strand strong stop transfer
    • Chen, Y., Balakrishnan, M., Roques, B. P., and Bambara, R. A. (2003) Steps of the acceptor invasion mechanism for HIV-1 minus strand strong stop transfer. J. Biol. Chem. 278, 38368-38375.
    • (2003) J. Biol. Chem , vol.278 , pp. 38368-38375
    • Chen, Y.1    Balakrishnan, M.2    Roques, B.P.3    Bambara, R.A.4
  • 21
    • 17644391796 scopus 로고    scopus 로고
    • Acceptor RNA cleavage profile supports an invasion mechanism for HIV-1 minus strand transfer
    • Chen, Y., Balakrishnan, M., Roques, B. P., and Bambara, R. A. (2005) Acceptor RNA cleavage profile supports an invasion mechanism for HIV-1 minus strand transfer. J. Biol. Chem. 280, 14443-14452.
    • (2005) J. Biol. Chem , vol.280 , pp. 14443-14452
    • Chen, Y.1    Balakrishnan, M.2    Roques, B.P.3    Bambara, R.A.4
  • 22
    • 0037424356 scopus 로고    scopus 로고
    • Mechanism of minus strand strong stop transfer in HIV-1 reverse transcription
    • Chen, Y., Balakrishnan, M., Roques, B. P., Fay, P. J., and Bambara, R. A. (2003) Mechanism of minus strand strong stop transfer in HIV-1 reverse transcription. J. Biol. Chem. 278, 8006-8017.
    • (2003) J. Biol. Chem , vol.278 , pp. 8006-8017
    • Chen, Y.1    Balakrishnan, M.2    Roques, B.P.3    Fay, P.J.4    Bambara, R.A.5
  • 23
    • 33747715191 scopus 로고    scopus 로고
    • Stimulation of HIV-1 minus strand strong stop DNA transfer by genomic sequences 3' of the primer binding site
    • Song, M., Balakrishnan, M., Chen, Y., Roques, B. P., and Bambara, R. A. (2006) Stimulation of HIV-1 minus strand strong stop DNA transfer by genomic sequences 3' of the primer binding site. J. Biol. Chem. 281, 24227-24235.
    • (2006) J. Biol. Chem , vol.281 , pp. 24227-24235
    • Song, M.1    Balakrishnan, M.2    Chen, Y.3    Roques, B.P.4    Bambara, R.A.5
  • 24
    • 41249100097 scopus 로고    scopus 로고
    • Proximity and branch migration mechanisms in HIV-1 minus strand strong stop DNA transfer
    • Song, M., Basu, V. P., Hanson, M. N, Roques, B. P., and Bambara, R. A. (2008) Proximity and branch migration mechanisms in HIV-1 minus strand strong stop DNA transfer. J. Biol. Chem. 283, 3141-3150.
    • (2008) J. Biol. Chem , vol.283 , pp. 3141-3150
    • Song, M.1    Basu, V.P.2    Hanson, M.N.3    Roques, B.P.4    Bambara, R.A.5
  • 26
    • 0029832897 scopus 로고    scopus 로고
    • Misincorporation by HIV-1 reverse transcriptase promotes recombination via strand transfer synthesis
    • Palaniappan, C., Wisniewski, M., Wu, W., Fay, P. J., and Bambara, R. A. (1996) Misincorporation by HIV-1 reverse transcriptase promotes recombination via strand transfer synthesis. J. Biol. Chem. 271, 22331-22338.
    • (1996) J. Biol. Chem , vol.271 , pp. 22331-22338
    • Palaniappan, C.1    Wisniewski, M.2    Wu, W.3    Fay, P.J.4    Bambara, R.A.5
  • 27
    • 0027165842 scopus 로고
    • Determinants of the RNase H cleavage specificity of human immunodeficiency virus reverse transcriptase
    • DeStefano, J. J., Mallaber, L. M., Fay, P. J., and Bambara, R. A. (1993) Determinants of the RNase H cleavage specificity of human immunodeficiency virus reverse transcriptase. Nucleic Acids Res. 21, 4330-4338.
    • (1993) Nucleic Acids Res , vol.21 , pp. 4330-4338
    • DeStefano, J.J.1    Mallaber, L.M.2    Fay, P.J.3    Bambara, R.A.4
  • 28
    • 0026486193 scopus 로고
    • Mechanism of DNA strand transfer reactions catalyzed by HIV-1 reverse transcriptase
    • Peliska, J. A., and Benkovic, S. J. (1992) Mechanism of DNA strand transfer reactions catalyzed by HIV-1 reverse transcriptase. Science 258, 1112-1118.
    • (1992) Science , vol.258 , pp. 1112-1118
    • Peliska, J.A.1    Benkovic, S.J.2
  • 29
    • 0000553844 scopus 로고
    • Roles of Ribonuclease in Reverse Transcription
    • Skalka, A. M, and Goff, S. P, Eds, pp, Cold Spring Harbor Laboratory Press, Plainview, NY
    • Champoux, J. J. (1993) Roles of Ribonuclease in Reverse Transcription. In Reverse Transcriptase (Skalka, A. M., and Goff, S. P., Eds.) pp 103 - 117, Cold Spring Harbor Laboratory Press, Plainview, NY.
    • (1993) Reverse Transcriptase , pp. 103-117
    • Champoux, J.J.1
  • 30
    • 0034612340 scopus 로고    scopus 로고
    • Copy-choice recombination by reverse transcriptases: Reshuffling of genetic markers mediated by RNA chaperones
    • Negroni, M., and Buc, H. (2000) Copy-choice recombination by reverse transcriptases: Reshuffling of genetic markers mediated by RNA chaperones. Proc. Natl. Acad. Sci. U.S.A. 97, 6385-6390.
    • (2000) Proc. Natl. Acad. Sci. U.S.A , vol.97 , pp. 6385-6390
    • Negroni, M.1    Buc, H.2
  • 31
    • 0027360074 scopus 로고
    • Mutated primer binding sites interacting with different tRNAs allow efficient murine leukemia virus replication
    • Lund, A. H., Duch, M., Lovmand, J., Jorgensen, P., and Pedersen, F. S. (1993) Mutated primer binding sites interacting with different tRNAs allow efficient murine leukemia virus replication. J. Virol. 67, 7125-7130.
    • (1993) J. Virol , vol.67 , pp. 7125-7130
    • Lund, A.H.1    Duch, M.2    Lovmand, J.3    Jorgensen, P.4    Pedersen, F.S.5
  • 32
    • 0022626913 scopus 로고
    • Isolation of a recombinant murine leukemia virus utilizing a new primer tRNA
    • Colicelli, J., and Goff, S. P. (1986) Isolation of a recombinant murine leukemia virus utilizing a new primer tRNA. J. Virol. 57, 37-45.
    • (1986) J. Virol , vol.57 , pp. 37-45
    • Colicelli, J.1    Goff, S.P.2
  • 33
    • 0026657062 scopus 로고
    • Reverse transcriptase of human immunodeficiency virus can use either human tRNA(3Lys) or Escherichia coli tRNA(2Gln) as a primer in an in vitro primer-utilization assay
    • Kohlstaedt, L. A., and Steitz, T. A. (1992) Reverse transcriptase of human immunodeficiency virus can use either human tRNA(3Lys) or Escherichia coli tRNA(2Gln) as a primer in an in vitro primer-utilization assay. Proc. Natl. Acad. Sci. U.S.A. 89, 9652-9656.
    • (1992) Proc. Natl. Acad. Sci. U.S.A , vol.89 , pp. 9652-9656
    • Kohlstaedt, L.A.1    Steitz, T.A.2
  • 34
    • 0028122546 scopus 로고
    • Effects of alterations of primer-binding site sequences on human immunodeficiency virus type 1 replication
    • Li, X., Mak, J., Arts, E. J., Gu, Z., Kleiman, L., Wainberg, M. A., and Parniak, M. A. (1994) Effects of alterations of primer-binding site sequences on human immunodeficiency virus type 1 replication. J. Virol. 68, 6198-6206.
    • (1994) J. Virol , vol.68 , pp. 6198-6206
    • Li, X.1    Mak, J.2    Arts, E.J.3    Gu, Z.4    Kleiman, L.5    Wainberg, M.A.6    Parniak, M.A.7
  • 35
    • 0028097831 scopus 로고
    • Minimal sequence requirements of a functional human immunodeficiency virus type 1 primer binding site
    • Wakefield, J. K., Rhim, H., and Morrow, C. D. (1994) Minimal sequence requirements of a functional human immunodeficiency virus type 1 primer binding site. J. Virol. 68, 1605-1614.
    • (1994) J. Virol , vol.68 , pp. 1605-1614
    • Wakefield, J.K.1    Rhim, H.2    Morrow, C.D.3
  • 36
    • 0028926717 scopus 로고
    • Reduced replication of human immunodeficiency virus type 1 mutants that use reverse transcription primers other than the natural tRNA(3Lys)
    • Das, A. T, Klaver, B., and Berkhout, B. (1995) Reduced replication of human immunodeficiency virus type 1 mutants that use reverse transcription primers other than the natural tRNA(3Lys). J. Virol. 69, 3090-3097.
    • (1995) J. Virol , vol.69 , pp. 3090-3097
    • Das, A.T.1    Klaver, B.2    Berkhout, B.3
  • 37
    • 34249742685 scopus 로고    scopus 로고
    • Nucleotides within the anticodon stem are important for optimal use of tRNA(Lys,3) as the primer for HIV-1 reverse transcription
    • McCulley, A., and Morrow, C. D. (2007) Nucleotides within the anticodon stem are important for optimal use of tRNA(Lys,3) as the primer for HIV-1 reverse transcription. Virology 364, 169-177.
    • (2007) Virology , vol.364 , pp. 169-177
    • McCulley, A.1    Morrow, C.D.2
  • 38
    • 0026578805 scopus 로고
    • Interaction between retroviral U5 RNA and the TΨC loop of the tRNA(Trp) primer is required for efficient initiation of reverse transcription
    • Aiyar, A., Cobrinik, D., Ge, Z., Kung, H. J., and Leis, J. (1992) Interaction between retroviral U5 RNA and the TΨC loop of the tRNA(Trp) primer is required for efficient initiation of reverse transcription. J. Virol. 66, 2464-2472.
    • (1992) J. Virol , vol.66 , pp. 2464-2472
    • Aiyar, A.1    Cobrinik, D.2    Ge, Z.3    Kung, H.J.4    Leis, J.5
  • 39
    • 0028176053 scopus 로고
    • Comparison of deoxyoligonucleotide and tRNA(Lys-3) as primers in an endogenous human immunodeficiency virus-1 in vitro reverse transcription/ template-switching reaction
    • Arts, E. J., Li, X., Gu, Z., Kleiman, L., Parniak, M. A., and Wainberg, M. A. (1994) Comparison of deoxyoligonucleotide and tRNA(Lys-3) as primers in an endogenous human immunodeficiency virus-1 in vitro reverse transcription/ template-switching reaction. J. Biol. Chem. 269, 14672-14680.
    • (1994) J. Biol. Chem , vol.269 , pp. 14672-14680
    • Arts, E.J.1    Li, X.2    Gu, Z.3    Kleiman, L.4    Parniak, M.A.5    Wainberg, M.A.6
  • 40
    • 0028028054 scopus 로고
    • Yeast Ty1 retrotransposon: The minus-strand primer binding site and a cis-acting domain of the Ty1 RNA are both important for packaging of primer tRNA inside virus-like particles
    • Wilhelm, M., Wilhelm, F. X., Keith, G, Agoutin, B., and Heyman, T. (1994) Yeast Ty1 retrotransposon: The minus-strand primer binding site and a cis-acting domain of the Ty1 RNA are both important for packaging of primer tRNA inside virus-like particles. Nucleic Acids Res. 22, 4560-4565.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4560-4565
    • Wilhelm, M.1    Wilhelm, F.X.2    Keith, G.3    Agoutin, B.4    Heyman, T.5
  • 41
    • 0030051203 scopus 로고    scopus 로고
    • Construction of a type 1 human immunodeficiency virus that maintains a primer binding site complementary to tRNA(His)
    • Wakefield, J. K, Kang, S. M., and Morrow, C. D. (1996) Construction of a type 1 human immunodeficiency virus that maintains a primer binding site complementary to tRNA(His). J. Virol. 70, 966-975.
    • (1996) J. Virol , vol.70 , pp. 966-975
    • Wakefield, J.K.1    Kang, S.M.2    Morrow, C.D.3
  • 42
    • 0031060135 scopus 로고    scopus 로고
    • Identification of a sequence within U5 required for human immunodeficiency virus type 1 to stably maintain a primer binding site complementary to tRNA(Met)
    • Kang, S. M., Zhang, Z., and Morrow, C. D. (1997) Identification of a sequence within U5 required for human immunodeficiency virus type 1 to stably maintain a primer binding site complementary to tRNA(Met). J. Virol. 71, 207-217.
    • (1997) J. Virol , vol.71 , pp. 207-217
    • Kang, S.M.1    Zhang, Z.2    Morrow, C.D.3
  • 43
    • 0030589458 scopus 로고    scopus 로고
    • Nucleotide sequences within the U5 region of the viral RNA genome are the major determinants for an human immunodeficiency virus type 1 to maintain a primer binding site complementary to tRNA(His)
    • Zhang, Z., Kang, S. M., LeBlanc, A., Hajduk, S. L., and Morrow, C. D. (1996) Nucleotide sequences within the U5 region of the viral RNA genome are the major determinants for an human immunodeficiency virus type 1 to maintain a primer binding site complementary to tRNA(His). Virology 226, 306-317.
    • (1996) Virology , vol.226 , pp. 306-317
    • Zhang, Z.1    Kang, S.M.2    LeBlanc, A.3    Hajduk, S.L.4    Morrow, C.D.5
  • 44
    • 0030795028 scopus 로고    scopus 로고
    • Nucleotide substitutions within U5 are critical for efficient reverse transcription of human immunodeficiency virus type 1 with a primer binding site complementary to tRNA(His)
    • Li, Y., Zhang, Z., Wakefield, J. K., Kang, S. M., and Morrow, C. D. (1997) Nucleotide substitutions within U5 are critical for efficient reverse transcription of human immunodeficiency virus type 1 with a primer binding site complementary to tRNA(His). J. Virol. 71, 6315-6322.
    • (1997) J. Virol , vol.71 , pp. 6315-6322
    • Li, Y.1    Zhang, Z.2    Wakefield, J.K.3    Kang, S.M.4    Morrow, C.D.5
  • 45
    • 33846676086 scopus 로고    scopus 로고
    • Importance of A-loop complementarity with tRNAHis anticodon for continued selection of tRNAHis as the HIV reverse transcription primer
    • Ni, N., Xu, W., and Morrow, C. D. (2007) Importance of A-loop complementarity with tRNAHis anticodon for continued selection of tRNAHis as the HIV reverse transcription primer. Virol. J. 4, 4.
    • (2007) Virol. J , vol.4 , pp. 4
    • Ni, N.1    Xu, W.2    Morrow, C.D.3
  • 46
    • 0032981011 scopus 로고    scopus 로고
    • Genetic analysis of a unique human immunodeficiency virus type 1 (HIV-1) with a primer binding site complementary to tRNAMet supports a role for U5-PBS stem-loop RNA structures in initiation of HIV-1 reverse transcription
    • Kang, S. M., and Morrow, C. D. (1999) Genetic analysis of a unique human immunodeficiency virus type 1 (HIV-1) with a primer binding site complementary to tRNAMet supports a role for U5-PBS stem-loop RNA structures in initiation of HIV-1 reverse transcription. J. Virol. 73, 1818-1827.
    • (1999) J. Virol , vol.73 , pp. 1818-1827
    • Kang, S.M.1    Morrow, C.D.2
  • 47
    • 0029864887 scopus 로고    scopus 로고
    • Psoralen crosslinking between human immunodeficiency virus type 1 RNA and primer tRNA3(Lys)
    • Skripkin, E., Isel, C., Marquet, R., Ehresmann, B., and Ehresmann, C. (1996) Psoralen crosslinking between human immunodeficiency virus type 1 RNA and primer tRNA3(Lys). Nucleic Acids Res. 24, 509-514.
    • (1996) Nucleic Acids Res , vol.24 , pp. 509-514
    • Skripkin, E.1    Isel, C.2    Marquet, R.3    Ehresmann, B.4    Ehresmann, C.5
  • 48
    • 0032008548 scopus 로고    scopus 로고
    • Mutational analysis of the tRNA3Lys/HIV-1 RNA (primer/template) complex
    • Isel, C., Keith, G., Ehresmann, B., Ehresmann, C., and Marquet, R. (1998) Mutational analysis of the tRNA3Lys/HIV-1 RNA (primer/template) complex. Nucleic Acids Res. 26, 1198-1204.
    • (1998) Nucleic Acids Res , vol.26 , pp. 1198-1204
    • Isel, C.1    Keith, G.2    Ehresmann, B.3    Ehresmann, C.4    Marquet, R.5
  • 49
    • 0030795935 scopus 로고    scopus 로고
    • The importance of the A-rich loop in human immunodeficiency virus type 1 reverse transcription and infectivity
    • Liang, C., Li, X., Rong, L., Inouye, P., Quan, Y., Kleiman, L., and Wainberg, M. A. (1997) The importance of the A-rich loop in human immunodeficiency virus type 1 reverse transcription and infectivity. J. Virol. 71, 5750-5757.
    • (1997) J. Virol , vol.71 , pp. 5750-5757
    • Liang, C.1    Li, X.2    Rong, L.3    Inouye, P.4    Quan, Y.5    Kleiman, L.6    Wainberg, M.A.7
  • 50
    • 0027431760 scopus 로고
    • Nuclease footprinting of human immunodeficiency virus reverse transcriptase/tRNA(Lys-3) complexes
    • Wohrl, B. M., Ehresmann, B., Keith, G, and Le Grice, S. F. (1993) Nuclease footprinting of human immunodeficiency virus reverse transcriptase/tRNA(Lys-3) complexes. J. Biol. Chem. 268, 13617-13624.
    • (1993) J. Biol. Chem , vol.268 , pp. 13617-13624
    • Wohrl, B.M.1    Ehresmann, B.2    Keith, G.3    Le Grice, S.F.4
  • 51
    • 0026767044 scopus 로고
    • Preferential interaction of human immunodeficiency virus reverse transcriptase with two regions of primer tRNA(Lys) as evidenced by footprinting studies and inhibition with synthetic oligoribonucleotides
    • Sarih-Cottin, L., Bordier, B., Musier-Forsyth, K, Andreola, M. L., Barr, P. J., and Litvak, S. (1992) Preferential interaction of human immunodeficiency virus reverse transcriptase with two regions of primer tRNA(Lys) as evidenced by footprinting studies and inhibition with synthetic oligoribonucleotides. J. Mol. Biol. 226, 1-6.
    • (1992) J. Mol. Biol , vol.226 , pp. 1-6
    • Sarih-Cottin, L.1    Bordier, B.2    Musier-Forsyth, K.3    Andreola, M.L.4    Barr, P.J.5    Litvak, S.6
  • 53
    • 0026611381 scopus 로고
    • Interaction of tRNALys with the p66/p66 form of HIV-1 reverse transcriptase stimulates DNA polymerase and ribonuclease H activities
    • Andreola, M. L., Nevinsky, G. A., Barr, P. J., Sarih-Cottin, L., Bordier, B., Fournier, M., Litvak, S., and Tarrago-Litvak, L. (1992) Interaction of tRNALys with the p66/p66 form of HIV-1 reverse transcriptase stimulates DNA polymerase and ribonuclease H activities. J. Biol. Chem. 267, 19356-19362.
    • (1992) J. Biol. Chem , vol.267 , pp. 19356-19362
    • Andreola, M.L.1    Nevinsky, G.A.2    Barr, P.J.3    Sarih-Cottin, L.4    Bordier, B.5    Fournier, M.6    Litvak, S.7    Tarrago-Litvak, L.8
  • 54
    • 8944226115 scopus 로고    scopus 로고
    • Human immunodeficiency virus Type 1 nucleocapsid protein (NCp7) directs specific initiation of minus-strand DNA synthesis primed by human tRNA(Lys3) in vitro: Studies of viral RNA molecules mutated in regions that flank the primer binding site
    • Li, X., Quan, Y., Arts, E. J., Li, Z., Preston, B. D., de Rocquigny, H, Roques, B. P., Darlix, J. L., Kleiman, L., Parniak, M. A., and Wainberg, M. A. (1996) Human immunodeficiency virus Type 1 nucleocapsid protein (NCp7) directs specific initiation of minus-strand DNA synthesis primed by human tRNA(Lys3) in vitro: Studies of viral RNA molecules mutated in regions that flank the primer binding site. J. Virol. 70, 4996-5004.
    • (1996) J. Virol , vol.70 , pp. 4996-5004
    • Li, X.1    Quan, Y.2    Arts, E.J.3    Li, Z.4    Preston, B.D.5    de Rocquigny, H.6    Roques, B.P.7    Darlix, J.L.8    Kleiman, L.9    Parniak, M.A.10    Wainberg, M.A.11
  • 55
    • 0027331556 scopus 로고
    • Modified nucleotides of tRNA(3Lys) modulate primer/template loop-loop interaction in the initiation complex of HIV-1 reverse transcription
    • Isel, C., Marquet, R., Keith, G., Ehresmann, C., and Ehresmann, B. (1993) Modified nucleotides of tRNA(3Lys) modulate primer/template loop-loop interaction in the initiation complex of HIV-1 reverse transcription. J. Biol. Chem. 268, 25269-25272.
    • (1993) J. Biol. Chem , vol.268 , pp. 25269-25272
    • Isel, C.1    Marquet, R.2    Keith, G.3    Ehresmann, C.4    Ehresmann, B.5
  • 56
    • 0034650237 scopus 로고    scopus 로고
    • In vitro evidence for the interaction of tRNA(3)(Lys) with U3 during the first strand transfer of HIV-1 reverse transcription
    • Brule, F., Bec, G., Keith, G., Le Grice, S. F., Roques, B. P., Ehresmann, B., Ehresmann, C., and Marquet, R. (2000) In vitro evidence for the interaction of tRNA(3)(Lys) with U3 during the first strand transfer of HIV-1 reverse transcription. Nucleic Acids Res. 28, 634-640.
    • (2000) Nucleic Acids Res , vol.28 , pp. 634-640
    • Brule, F.1    Bec, G.2    Keith, G.3    Le Grice, S.F.4    Roques, B.P.5    Ehresmann, B.6    Ehresmann, C.7    Marquet, R.8
  • 57
    • 0030060362 scopus 로고    scopus 로고
    • Role of methionine 184 of human immunodeficiency virus type-1 reverse transcriptase in the polymerase function and fidelity of DNA synthesis
    • Pandey, V. N., Kaushik, N., Rege, N., Sarafianos, S. G., Yadav, P. N., and Modak, M. J. (1996) Role of methionine 184 of human immunodeficiency virus type-1 reverse transcriptase in the polymerase function and fidelity of DNA synthesis. Biochemistry 35, 2168-2179.
    • (1996) Biochemistry , vol.35 , pp. 2168-2179
    • Pandey, V.N.1    Kaushik, N.2    Rege, N.3    Sarafianos, S.G.4    Yadav, P.N.5    Modak, M.J.6
  • 58
    • 0042858256 scopus 로고    scopus 로고
    • Role of the Reverse Transcriptase, Nucleocapsid Protein, and Template Structure in the Two-step Transfer Mechanism in Retroviral Recombination
    • Roda, R. H., Balakrishnan, M., Hanson, M. N., Wohrl, B. M., Le Grice, S. F., Roques, B. P., Gorelick, R. J., and Bambara, R. A. (2003) Role of the Reverse Transcriptase, Nucleocapsid Protein, and Template Structure in the Two-step Transfer Mechanism in Retroviral Recombination. J. Biol. Chem. 278, 31536-31546.
    • (2003) J. Biol. Chem , vol.278 , pp. 31536-31546
    • Roda, R.H.1    Balakrishnan, M.2    Hanson, M.N.3    Wohrl, B.M.4    Le Grice, S.F.5    Roques, B.P.6    Gorelick, R.J.7    Bambara, R.A.8
  • 60
    • 0029794295 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 nucleocapsid protein reduces reverse transcriptase pausing at a secondary structure near the murine leukemia virus polypurine tract
    • Wu, W., Henderson, L. E., Copeland, T. D., Gorelick, R. J., Bosche, W. J., Rein, A., and Levin, J. G. (1996) Human immunodeficiency virus type 1 nucleocapsid protein reduces reverse transcriptase pausing at a secondary structure near the murine leukemia virus polypurine tract. J. Virol. 70, 7132-7142.
    • (1996) J. Virol , vol.70 , pp. 7132-7142
    • Wu, W.1    Henderson, L.E.2    Copeland, T.D.3    Gorelick, R.J.4    Bosche, W.J.5    Rein, A.6    Levin, J.G.7
  • 61
    • 0032993634 scopus 로고    scopus 로고
    • Molecular requirements for human immunodeficiency virus type 1 plus-strand transfer: Analysis in reconstituted and endogenous reverse transcription systems
    • Wu, T., Guo, J., Bess, J., Henderson, L. E., and Levin, J. G. (1999) Molecular requirements for human immunodeficiency virus type 1 plus-strand transfer: Analysis in reconstituted and endogenous reverse transcription systems. J. Virol. 73, 4794-4805.
    • (1999) J. Virol , vol.73 , pp. 4794-4805
    • Wu, T.1    Guo, J.2    Bess, J.3    Henderson, L.E.4    Levin, J.G.5
  • 62
    • 0028936075 scopus 로고
    • Initiation of reverse transcription of HIV-1: Secondary structure of the HIV-1 RNA/tRNA(3Lys) (template/primer)
    • Isel, C., Ehresmann, C., Keith, G., Ehresmann, B., and Marquet, R. (1995) Initiation of reverse transcription of HIV-1: Secondary structure of the HIV-1 RNA/tRNA(3Lys) (template/primer). J. Mol. Biol. 247, 236-250.
    • (1995) J. Mol. Biol , vol.247 , pp. 236-250
    • Isel, C.1    Ehresmann, C.2    Keith, G.3    Ehresmann, B.4    Marquet, R.5
  • 63
    • 0027996464 scopus 로고
    • Mutational analysis of the bipartite dimer linkage structure of human immunodeficiency virus type 1 genomic RNA
    • Paillart, J. C., Marquet, R., Skripkin, E., Ehresmann, B., and Ehresmann, C. (1994) Mutational analysis of the bipartite dimer linkage structure of human immunodeficiency virus type 1 genomic RNA. J. Biol. Chem. 269, 27486-27493.
    • (1994) J. Biol. Chem , vol.269 , pp. 27486-27493
    • Paillart, J.C.1    Marquet, R.2    Skripkin, E.3    Ehresmann, B.4    Ehresmann, C.5
  • 64
    • 0029972930 scopus 로고    scopus 로고
    • A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA
    • Paillart, J. C., Skripkin, E., Ehresmann, B., Ehresmann, C., and Marquet, R. (1996) A loop-loop "kissing" complex is the essential part of the dimer linkage of genomic HIV-1 RNA. Proc. Natl. Acad. Sci. U.S.A. 93, 5572-5577.
    • (1996) Proc. Natl. Acad. Sci. U.S.A , vol.93 , pp. 5572-5577
    • Paillart, J.C.1    Skripkin, E.2    Ehresmann, B.3    Ehresmann, C.4    Marquet, R.5
  • 65
    • 0028239204 scopus 로고
    • Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro
    • Skripkin, E., Paillart, J. C., Marquet, R., Ehresmann, B., and Ehresmann, C. (1994) Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro. Proc. Natl. Acad. Sci. U.S.A. 91, 4945-4949.
    • (1994) Proc. Natl. Acad. Sci. U.S.A , vol.91 , pp. 4945-4949
    • Skripkin, E.1    Paillart, J.C.2    Marquet, R.3    Ehresmann, B.4    Ehresmann, C.5
  • 66
    • 0035965239 scopus 로고    scopus 로고
    • The kissing hairpin sequence promotes recombination within the HIV-I 5' leader region
    • Balakrishnan, M., Fay, P. J., and Bambara, R. A. (2001) The kissing hairpin sequence promotes recombination within the HIV-I 5' leader region. J. Biol. Chem. 276, 36482-36492.
    • (2001) J. Biol. Chem , vol.276 , pp. 36482-36492
    • Balakrishnan, M.1    Fay, P.J.2    Bambara, R.A.3
  • 67
    • 0344406983 scopus 로고    scopus 로고
    • Template Dimerization Promotes an Acceptor Invasion-Induced Transfer Mechanism during Human Immunodeficiency Virus Type 1 minus-Strand Synthesis
    • Balakrishnan, M., Roques, B. P., Fay, P. J., and Bambara, R. A. (2003) Template Dimerization Promotes an Acceptor Invasion-Induced Transfer Mechanism during Human Immunodeficiency Virus Type 1 minus-Strand Synthesis. J. Virol. 77, 4710-4721.
    • (2003) J. Virol , vol.77 , pp. 4710-4721
    • Balakrishnan, M.1    Roques, B.P.2    Fay, P.J.3    Bambara, R.A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.