Acceptor RNA cleavage profile supports an invasion mechanism for HIV-1 minus strand transfer

Journal of Biological Chemistry

Volumn 280, Issue 15, 2005, Pages 14443-14452

  Chen, Yan ^a,c   Balakrishnan, Mini ^a   Roques, Bernard P ^b   Bambara, Robert A ^a  

^a UNIVERSITY OF ROCHESTER MEDICAL CENTER   (United States)

^b FACULTÉ DES SCIENCES PHARMACEUTIQUES ET BIOLOGIQUES   (France)

^c UNIVERSITY OF CONNECTICUT HEALTH CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; ESCHERICHIA COLI; GENES; SYNTHESIS (CHEMICAL);

ACCEPTOR RNA CLEAVAGE PROFILE; MULTI-STEP MECHANISM; PRIMER TERMINUS; REVERSE TRANSCRIPTASE (RT);

RNA;

BACTERIAL ENZYME; COMPLEMENTARY DNA; RIBONUCLEASE H; RNA DIRECTED DNA POLYMERASE; TRANSFER RNA;

5' UNTRANSLATED REGION; ARTICLE; ESCHERICHIA COLI; HUMAN IMMUNODEFICIENCY VIRUS 1; PRIORITY JOURNAL; PROTEIN INTERACTION; RNA CLEAVAGE; VALIDATION PROCESS; VIRUS NUCLEOCAPSID;

DNA; DNA PRIMERS; DNA, COMPLEMENTARY; ESCHERICHIA COLI; HIV-1; HIV-1 REVERSE TRANSCRIPTASE; MODELS, GENETIC; NUCLEOCAPSID; NUCLEOCAPSID PROTEINS; PROTEIN BINDING; RIBONUCLEASE H, CALF THYMUS; RIBONUCLEASES; RNA; SENSITIVITY AND SPECIFICITY; TIME FACTORS;

ESCHERICHIA COLI; HUMAN IMMUNODEFICIENCY VIRUS 1;

EID: 17644391796     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M412190200     Document Type: Article

References (42)

1. Telesnitsky, A., and Goff, S. P. (1993) in Reverse Transcriptase (Skalka, A. M., and Goff, S. P., eds) pp. 49-83, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
2. Lobel, L. I., and Goff, S. P. (1985) J. Virol. 53, 447-455
3. Ramsey, C. A., and Panganiban, A. T. (1993) J. Virol. 67, 4114-4121
4. Klaver, B., and Berkhout, B. (1994) Nucleic Acids Res. 22, 137-144
5. Kulpa, D., Topping, R., and Telesnitsky, A. (1997) EMBO J. 16, 856-865
6. Yin, P. D., Pathak, V. K., Rowan, A. E., Teufel, R. J., II, and Hu, W. S. (1997) J. Virol. 71, 2487-2494
7. Ohi, Y., and Clever, J. L. (2000) J. Virol. 74, 8324-8334
8. Topping, R., Demoitie, M. A., Shin, N. H., and Telesnitsky, A. (1998) J. Mol. Biol. 281, 1-15
9. Champoux, J. J. (1993) in Reverse Transcriptase (Skalka, A. M., and Goff, S. P., eds) pp. 103-117, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
10. Repaske, R., Hartley, J. W., Kavlick, M. F., O'Neill, R. R., and Austin, J. B. (1989) J. Virol. 63, 1460-1464
11. Tanese, N., Telesnitsky, A., and Goff, S. P. (1991) J. Virol. 65, 4387-4397
12. Tisdale, M., Schulze, T., Larder, B. A., and Moelling, K. (1991) J. Gen. Virol. 72, 59-66
13. Telesnitsky, A., Blain, S. W., and Goff, S. P. (1992) J. Virol. 66, 615-622
14. Telesnitsky, A., and Goff, S. P. (1993) EMBO J. 12, 4433-4438
15. Hwang, C. K., Svarovskaia, E. S., and Pathak, V. K. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 12209-12214
16. DeStefano, J. J., Mallaber, L. M., Rodriguez-Rodriguez, L., Fay, P. J., and Bambara, R. A. (1992) J. Virol. 66, 6370-6378
17. Suo, Z., and Johnson, K. A. (1997) Biochemistry 36, 12459-12467
18. Klarmann, G. J., Schauber, C. A., and Preston, B. D. (1993) J. Biol. Chem. 268, 9793-9802
19. Darlix, J. L., Lapadat-Tapolsky, M., de Rocquigny, H., and Roques, B. P. (1995) J. Mol. Biol. 254, 523-537
20. Rein, A., Henderson, L. E., and Levin, J. G. (1998) Trends Biochem. Sci. 23, 297-301
21. Dib-Hajj, F., Khan, R., and Giedroc, D. P. (1993) Protein Sci. 2, 231-243
22. Tsuchihashi, Z., and Brown, P. O. (1994) J. Virol. 68, 5863-5870
23. You, J. C., and McHenry, C. S. (1994) J. Biol. Chem. 269, 31491-31495
24. Lapadat-Tapolsky, M., Pernelle, C., Borie, C., and Darlix, J. L. (1995) Nucleic Acids Res. 23, 2434-2441
25. Peliska, J. A., Balasubramanian, S., Giedroc, D. P., and Benkovic, S. J. (1994) Biochemistry 33, 13817-13823
26. Cameron, C. E., Ghosh, M., Le Grice, S. F., and Benkovic, S. J. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 6700-6705
27. Chen, Y., Balakrishnan, M., Roques, B. P., Fay, P. J., and Bambara, R. A. (2003) J. Biol. Chem. 278, 8006-8017
28. Roda, R. H., Balakrishnan, M., Hanson, M. N., Wohrl, B. M., Le Grice, S. F., Roques, B. P., Gorelick, R. J., and Bambara, R. A. (2003) J. Biol. Chem. 278, 31536-31546
29. Chen, Y., Balakrishnan, M., Roques, B. P., and Bambara, R. A. (2003) J. Biol. Chem. 278, 38368-38375
30. Guo, J., Henderson, L. E., Bess, J., Kane, B., and Levin, J. G. (1997) J. Virol. 71, 5178-5188
31. Guo, J., Wu, T., Bess, J., Henderson, L. E., and Levin, J. G. (1998) J. Virol. 72, 6716-6724
32. Driscoll, M. D., and Hughes, S. H. (2000) J. Virol. 74, 8785-8792
33. Driscoll, M. D., Golinelli, M. P., and Hughes, S. H. (2001) J. Virol. 75, 672-686
34. Kim, J. K., Palaniappan, C., Wu, W., Fay, P. J., and Bambara, R. A. (1997) J. Biol. Chem. 272, 16769-16777
35. Pandey, V. N., Kaushik, N., Rege, N., Sarafianos, S. G., Yadav, P. N., and Modak, M. J. (1996) Biochemistry 35, 2168-2179
36. de Rocquigny, H., Ficheux, D., Gabus, C., Fournie-Zaluski, M. C., Darlix, J. L., and Roques, B. P. (1991) Biochem. Biophys. Res. Commun. 180, 1010-1018
37. Wisniewski, M., Balakrishnan, M., Palaniappan, C., Fay, P. J., and Bambara, R. A. (2000) J. Biol. Chem. 275, 37664-37671
38. Henderson, L. E., Bowers, M. A., Sowder, R. C., II, Serabyn, S. A., Johnson, D. G., Bess, J. W., Jr., Arthur, L. O., Bryant, D. K., and Fenselau, C. (1992) J. Virol. 66, 1856-1865
39. You, J. C., and McHenry, C. S. (1993) J. Biol. Chem. 268, 16519-16527
40. Raja, A., and DeStefano, J. J. (2003) J. Biol. Chem. 278, 10102-10111
41. DeStefano, J. J., Mallaber, L. M., Fay, P. J., and Bambara, R. A. (1993) Nucleic Acids Res. 21, 4330-4338
42. DeStefano, J. J. (1995) Nucleic Acids Res. 23, 3901-3908