-
1
-
-
18844397555
-
RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP
-
Baker D.L., Youssef O.A., Chastkofsky M.I., Dy D.A., Terns R.M., and Terns M.P. RNA-guided RNA modification: functional organization of the archaeal H/ACA RNP. Genes Dev. 19 (2005) 1238-1248
-
(2005)
Genes Dev.
, vol.19
, pp. 1238-1248
-
-
Baker, D.L.1
Youssef, O.A.2
Chastkofsky, M.I.3
Dy, D.A.4
Terns, R.M.5
Terns, M.P.6
-
2
-
-
0032247416
-
Evolutionary fates and origins of U12-type introns
-
Burge C.B., Padgett R.A., and Sharp P.A. Evolutionary fates and origins of U12-type introns. Mol. Cell 2 (1998) 773-785
-
(1998)
Mol. Cell
, vol.2
, pp. 773-785
-
-
Burge, C.B.1
Padgett, R.A.2
Sharp, P.A.3
-
3
-
-
0036668627
-
New clues to the function of the Cajal body
-
Carmo-Fonseca M. New clues to the function of the Cajal body. EMBO Rep. 3 (2002) 726-727
-
(2002)
EMBO Rep.
, vol.3
, pp. 726-727
-
-
Carmo-Fonseca, M.1
-
4
-
-
28444456713
-
Cajal bodies: a long history of discovery
-
Cioce M., and Lamond A.I. Cajal bodies: a long history of discovery. Annu. Rev. Cell Dev. Biol. 21 (2005) 105-131
-
(2005)
Annu. Rev. Cell Dev. Biol.
, vol.21
, pp. 105-131
-
-
Cioce, M.1
Lamond, A.I.2
-
5
-
-
7244245762
-
Finishing the euchromatic sequence of the human genome
-
Consortium I.H.G.S. Finishing the euchromatic sequence of the human genome. Nature 431 (2004) 931-945
-
(2004)
Nature
, vol.431
, pp. 931-945
-
-
Consortium, I.H.G.S.1
-
6
-
-
34748876539
-
Human telomerase RNA accumulation in Cajal bodies facilitates telomerase recruitment to telomeres and telomere elongation
-
Cristofari G., Adolf E., Reichenbach P., Sikora K., Terns R.M., Terns M.P., and Lingner J. Human telomerase RNA accumulation in Cajal bodies facilitates telomerase recruitment to telomeres and telomere elongation. Mol. Cell 27 (2007) 882-889
-
(2007)
Mol. Cell
, vol.27
, pp. 882-889
-
-
Cristofari, G.1
Adolf, E.2
Reichenbach, P.3
Sikora, K.4
Terns, R.M.5
Terns, M.P.6
Lingner, J.7
-
7
-
-
0037013831
-
Cajal body-specific small nuclear RNAs: a novel class of 2′-O-methylation and pseudouridylation guide RNAs
-
Darzacq X., Jady B.E., Verheggen C., Kiss A.M., Bertrand E., and Kiss T. Cajal body-specific small nuclear RNAs: a novel class of 2′-O-methylation and pseudouridylation guide RNAs. EMBO J. 21 (2002) 2746-2756
-
(2002)
EMBO J.
, vol.21
, pp. 2746-2756
-
-
Darzacq, X.1
Jady, B.E.2
Verheggen, C.3
Kiss, A.M.4
Bertrand, E.5
Kiss, T.6
-
8
-
-
0021100690
-
Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei
-
Dignam J.D., Lebovitz R.M., and Roeder R.G. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. Nucleic Acids Res. 11 (1983) 1475-1489
-
(1983)
Nucleic Acids Res.
, vol.11
, pp. 1475-1489
-
-
Dignam, J.D.1
Lebovitz, R.M.2
Roeder, R.G.3
-
9
-
-
34250653243
-
Formation of the 3′ end of histone mRNA: getting closer to the end
-
Dominski Z., and Marzluff W.F. Formation of the 3′ end of histone mRNA: getting closer to the end. Gene 396 (2007) 373-390
-
(2007)
Gene
, vol.396
, pp. 373-390
-
-
Dominski, Z.1
Marzluff, W.F.2
-
10
-
-
33644775758
-
Human telomerase and Cajal body ribonucleoproteins share a unique specificity of Sm protein association
-
Fu D., and Collins K. Human telomerase and Cajal body ribonucleoproteins share a unique specificity of Sm protein association. Genes Dev. 20 (2006) 531-536
-
(2006)
Genes Dev.
, vol.20
, pp. 531-536
-
-
Fu, D.1
Collins, K.2
-
11
-
-
0031003901
-
The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation
-
Ganot P., Caizergues-Ferrar M., and Kiss T. The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation. Genes Dev. 11 (1997) 941-956
-
(1997)
Genes Dev.
, vol.11
, pp. 941-956
-
-
Ganot, P.1
Caizergues-Ferrar, M.2
Kiss, T.3
-
12
-
-
0344289534
-
Nucleolar factors direct the 2′-O-ribose methylation and pseudouridylation of U6 spliceosomal RNA
-
Ganot P., Jady B.E., Bortolin M.L., Darzacq X., and Kiss T. Nucleolar factors direct the 2′-O-ribose methylation and pseudouridylation of U6 spliceosomal RNA. Mol. Cell. Biol. 19 (1999) 6906-6917
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 6906-6917
-
-
Ganot, P.1
Jady, B.E.2
Bortolin, M.L.3
Darzacq, X.4
Kiss, T.5
-
13
-
-
35649002434
-
Common genetic variation in TP53 and its flanking genes, WDR79 and ATP1B2, and susceptibility to breast cancer
-
Garcia-Closas M., Kristensen V., Langerod A., Qi Y., Yeager M., Burdett L., Welch R., Lissowska J., Peplonska B., Brinton L., et al. Common genetic variation in TP53 and its flanking genes, WDR79 and ATP1B2, and susceptibility to breast cancer. Int. J. Cancer 121 (2007) 2532-2538
-
(2007)
Int. J. Cancer
, vol.121
, pp. 2532-2538
-
-
Garcia-Closas, M.1
Kristensen, V.2
Langerod, A.3
Qi, Y.4
Yeager, M.5
Burdett, L.6
Welch, R.7
Lissowska, J.8
Peplonska, B.9
Brinton, L.10
-
14
-
-
23644457818
-
Genome-wide analyses of two families of snoRNA genes from Drosophila melanogaster, demonstrating the extensive utilization of introns for coding of snoRNAs
-
Huang Z.P., Zhou H., He H.L., Chen C.L., Liang D., and Qu L.H. Genome-wide analyses of two families of snoRNA genes from Drosophila melanogaster, demonstrating the extensive utilization of introns for coding of snoRNAs. RNA 11 (2005) 1303-1316
-
(2005)
RNA
, vol.11
, pp. 1303-1316
-
-
Huang, Z.P.1
Zhou, H.2
He, H.L.3
Chen, C.L.4
Liang, D.5
Qu, L.H.6
-
15
-
-
27644553024
-
Maintaining a conserved methylation in plant and insect U2 snRNA through compensatory mutation by nucleotide insertion
-
Huang Z.P., Zhou H., and Qu L.H. Maintaining a conserved methylation in plant and insect U2 snRNA through compensatory mutation by nucleotide insertion. IUBMB Life 57 (2005) 693-699
-
(2005)
IUBMB Life
, vol.57
, pp. 693-699
-
-
Huang, Z.P.1
Zhou, H.2
Qu, L.H.3
-
16
-
-
33947167823
-
A combined computational and experimental analysis of two families of snoRNA genes from Caenorhabditis elegans, revealing the expression and evolution pattern of snoRNAs in nematodes
-
Huang Z.P., Chen C.J., Zhou H., Li B.B., and Qu L.H. A combined computational and experimental analysis of two families of snoRNA genes from Caenorhabditis elegans, revealing the expression and evolution pattern of snoRNAs in nematodes. Genomics 89 (2007) 490-501
-
(2007)
Genomics
, vol.89
, pp. 490-501
-
-
Huang, Z.P.1
Chen, C.J.2
Zhou, H.3
Li, B.B.4
Qu, L.H.5
-
17
-
-
0035253857
-
A small nucleolar guide RNA functions both in 2′-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA
-
Jady B.E., and Kiss T. A small nucleolar guide RNA functions both in 2′-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA. EMBO J. 20 (2001) 541-551
-
(2001)
EMBO J.
, vol.20
, pp. 541-551
-
-
Jady, B.E.1
Kiss, T.2
-
18
-
-
0344080588
-
Modification of Sm small nuclear RNAs occurs in the nucleoplasmic Cajal body following import from the cytoplasm
-
Jady B.E., Darzacq X., Tucker K.E., Matera A.G., Bertrand E., and Kiss T. Modification of Sm small nuclear RNAs occurs in the nucleoplasmic Cajal body following import from the cytoplasm. EMBO J. 22 (2003) 1878-1888
-
(2003)
EMBO J.
, vol.22
, pp. 1878-1888
-
-
Jady, B.E.1
Darzacq, X.2
Tucker, K.E.3
Matera, A.G.4
Bertrand, E.5
Kiss, T.6
-
19
-
-
17944388104
-
Human telomerase RNA and box H/ACA scaRNAs share a common Cajal body-specific localization signal
-
Jady B.E., Bertrand E., and Kiss T. Human telomerase RNA and box H/ACA scaRNAs share a common Cajal body-specific localization signal. J. Cell Biol. 164 (2004) 647-652
-
(2004)
J. Cell Biol.
, vol.164
, pp. 647-652
-
-
Jady, B.E.1
Bertrand, E.2
Kiss, T.3
-
20
-
-
0036849291
-
A Cajal body-specific pseudouridylation guide RNA is composed of two box H/ACA snoRNA-like domains
-
Kiss A.M., Jady B.E., Darzacq X., Verheggen C., Bertrand E., and Kiss T. A Cajal body-specific pseudouridylation guide RNA is composed of two box H/ACA snoRNA-like domains. Nucleic Acids Res. 30 (2002) 4643-4649
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 4643-4649
-
-
Kiss, A.M.1
Jady, B.E.2
Darzacq, X.3
Verheggen, C.4
Bertrand, E.5
Kiss, T.6
-
21
-
-
2942718696
-
Human box H/ACA pseudouridylation guide RNA machinery
-
Kiss A.M., Jady B.E., Bertrand E., and Kiss T. Human box H/ACA pseudouridylation guide RNA machinery. Mol. Cell. Biol. 24 (2004) 5797-5807
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 5797-5807
-
-
Kiss, A.M.1
Jady, B.E.2
Bertrand, E.3
Kiss, T.4
-
22
-
-
34250649780
-
Biogenesis and intranuclear trafficking of human box C/D and H/ACA RNPs
-
Kiss T., Fayet E., Jady B.E., Richard P., and Weber M. Biogenesis and intranuclear trafficking of human box C/D and H/ACA RNPs. Cold Spring Harb. Symp. Quant. Biol. 71 (2006) 407-417
-
(2006)
Cold Spring Harb. Symp. Quant. Biol.
, vol.71
, pp. 407-417
-
-
Kiss, T.1
Fayet, E.2
Jady, B.E.3
Richard, P.4
Weber, M.5
-
23
-
-
59049095168
-
Large-scale evaluation of candidate genes identifies associations between DNA repair and genomic maintenance and development of benzene hematotoxicity
-
10.1093/carcin/bgn249 Published online October 31, 2008
-
Lan Q., Zhang L., Shen M., Jo W.J., Vermeulen R., Li G., Vulpe C., Lim S., Ren X., Rappaport S.M., et al. Large-scale evaluation of candidate genes identifies associations between DNA repair and genomic maintenance and development of benzene hematotoxicity. Carcinogenesis 30 (2009) 50-58 10.1093/carcin/bgn249 Published online October 31, 2008
-
(2009)
Carcinogenesis
, vol.30
, pp. 50-58
-
-
Lan, Q.1
Zhang, L.2
Shen, M.3
Jo, W.J.4
Vermeulen, R.5
Li, G.6
Vulpe, C.7
Lim, S.8
Ren, X.9
Rappaport, S.M.10
-
24
-
-
0023724428
-
Four novel U RNAs are encoded by a herpesvirus
-
Lee S.I., Murthy S.C., Trimble J.J., Desrosiers R.C., and Steitz J.A. Four novel U RNAs are encoded by a herpesvirus. Cell 54 (1988) 599-607
-
(1988)
Cell
, vol.54
, pp. 599-607
-
-
Lee, S.I.1
Murthy, S.C.2
Trimble, J.J.3
Desrosiers, R.C.4
Steitz, J.A.5
-
25
-
-
33644875300
-
snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs
-
Lestrade L., and Weber M.J. snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs. Nucleic Acids Res. 34 (2006) D158-D162
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Lestrade, L.1
Weber, M.J.2
-
26
-
-
33748947672
-
Crystal structure of an H/ACA box ribonucleoprotein particle
-
Li L., and Ye K. Crystal structure of an H/ACA box ribonucleoprotein particle. Nature 443 (2006) 302-307
-
(2006)
Nature
, vol.443
, pp. 302-307
-
-
Li, L.1
Ye, K.2
-
27
-
-
33644915790
-
The Drosophila melanogaster Cajal body
-
Liu J.L., Murphy C., Buszczak M., Clatterbuck S., Goodman R., and Gall J.G. The Drosophila melanogaster Cajal body. J. Cell Biol. 172 (2006) 875-884
-
(2006)
J. Cell Biol.
, vol.172
, pp. 875-884
-
-
Liu, J.L.1
Murphy, C.2
Buszczak, M.3
Clatterbuck, S.4
Goodman, R.5
Gall, J.G.6
-
28
-
-
0025580878
-
The numerous modified nucleotides in eukaryotic ribosomal RNA
-
Maden B.E.H. The numerous modified nucleotides in eukaryotic ribosomal RNA. Prog. Nucleic Acid Res. Mol. Biol. 39 (1990) 241-303
-
(1990)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.39
, pp. 241-303
-
-
Maden, B.E.H.1
-
29
-
-
0002425959
-
Posttranscriptional modifications in the U small nuclear RNAs
-
Grosjean H., and Benne R. (Eds), ASM Press, Washington, D.C.
-
Massenet S., Mougin A., and Branlant C. Posttranscriptional modifications in the U small nuclear RNAs. In: Grosjean H., and Benne R. (Eds). Modification and Editing of RNA (1998), ASM Press, Washington, D.C. 201-227
-
(1998)
Modification and Editing of RNA
, pp. 201-227
-
-
Massenet, S.1
Mougin, A.2
Branlant, C.3
-
30
-
-
33644927702
-
Pumping RNA: nuclear bodybuilding along the RNP pipeline
-
Matera A.G., and Shpargel K.B. Pumping RNA: nuclear bodybuilding along the RNP pipeline. Curr. Opin. Cell Biol. 18 (2006) 317-324
-
(2006)
Curr. Opin. Cell Biol.
, vol.18
, pp. 317-324
-
-
Matera, A.G.1
Shpargel, K.B.2
-
31
-
-
33745148277
-
How a single protein complex accommodates many different H/ACA RNAs
-
Meier U.T. How a single protein complex accommodates many different H/ACA RNAs. Trends Biochem. Sci. 31 (2006) 311-315
-
(2006)
Trends Biochem. Sci.
, vol.31
, pp. 311-315
-
-
Meier, U.T.1
-
33
-
-
5444231229
-
A role for Cajal bodies in the final steps of U2 snRNP biogenesis
-
Nesic D., Tanackovic G., and Kramer A. A role for Cajal bodies in the final steps of U2 snRNP biogenesis. J. Cell Sci. 117 (2004) 4423-4433
-
(2004)
J. Cell Sci.
, vol.117
, pp. 4423-4433
-
-
Nesic, D.1
Tanackovic, G.2
Kramer, A.3
-
34
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
Notredame C., Higgins D.G., and Heringa J. T-Coffee: A novel method for fast and accurate multiple sequence alignment. J. Mol. Biol. 302 (2000) 205-217
-
(2000)
J. Mol. Biol.
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
35
-
-
56649117675
-
The assembly of a spliceosomal small nuclear ribonucleoprotein particle
-
Patel S.B., and Bellini M. The assembly of a spliceosomal small nuclear ribonucleoprotein particle. Nucleic Acids Res. 36 (2008) 6482-6493
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 6482-6493
-
-
Patel, S.B.1
Bellini, M.2
-
36
-
-
47549105524
-
Primary microRNA transcript retention at sites of transcription leads to enhanced microRNA production
-
Pawlicki J.M., and Steitz J.A. Primary microRNA transcript retention at sites of transcription leads to enhanced microRNA production. J. Cell Biol. 182 (2008) 61-76
-
(2008)
J. Cell Biol.
, vol.182
, pp. 61-76
-
-
Pawlicki, J.M.1
Steitz, J.A.2
-
37
-
-
44349123569
-
siRNA and miRNA processing: new functions for Cajal bodies
-
Pontes O., and Pikaard C.S. siRNA and miRNA processing: new functions for Cajal bodies. Curr. Opin. Genet. Dev. 18 (2008) 197-203
-
(2008)
Curr. Opin. Genet. Dev.
, vol.18
, pp. 197-203
-
-
Pontes, O.1
Pikaard, C.S.2
-
39
-
-
0042967786
-
A common sequence motif determines the Cajal body-specific localization of box H/ACA scaRNAs
-
Richard P., Darzacq X., Bertrand E., Jady B.E., Verheggen C., and Kiss T. A common sequence motif determines the Cajal body-specific localization of box H/ACA scaRNAs. EMBO J. 22 (2003) 1-11
-
(2003)
EMBO J.
, vol.22
, pp. 1-11
-
-
Richard, P.1
Darzacq, X.2
Bertrand, E.3
Jady, B.E.4
Verheggen, C.5
Kiss, T.6
-
40
-
-
33644894371
-
The Cajal body: a meeting place for spliceosomal snRNPs in the nuclear maze
-
Stanek D., and Neugebauer K.M. The Cajal body: a meeting place for spliceosomal snRNPs in the nuclear maze. Chromosoma 115 (2006) 343-354
-
(2006)
Chromosoma
, vol.115
, pp. 343-354
-
-
Stanek, D.1
Neugebauer, K.M.2
-
41
-
-
0024853122
-
Immunoprecipitation of ribonucleoproteins using autoantibodies
-
Steitz J.A. Immunoprecipitation of ribonucleoproteins using autoantibodies. Methods Enzymol. 180 (1989) 468-481
-
(1989)
Methods Enzymol.
, vol.180
, pp. 468-481
-
-
Steitz, J.A.1
-
43
-
-
0036176517
-
Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin
-
Terns M.P., and Terns R.M. Small nucleolar RNAs: versatile trans-acting molecules of ancient evolutionary origin. Gene Expr. 10 (2002) 17-39
-
(2002)
Gene Expr.
, vol.10
, pp. 17-39
-
-
Terns, M.P.1
Terns, R.M.2
-
44
-
-
34748845108
-
Structural and functional characterization of human telomerase RNA processing and Cajal body localization signals
-
Theimer C.A., Jady B.E., Chim N., Richard P., Breece K.E., Kiss T., and Feigon J. Structural and functional characterization of human telomerase RNA processing and Cajal body localization signals. Mol. Cell 27 (2007) 869-881
-
(2007)
Mol. Cell
, vol.27
, pp. 869-881
-
-
Theimer, C.A.1
Jady, B.E.2
Chim, N.3
Richard, P.4
Breece, K.E.5
Kiss, T.6
Feigon, J.7
-
45
-
-
9244225692
-
Guide RNAs with 5′ caps and novel box C/D snoRNA-like domains for modification of snRNAs in metazoa
-
Tycowski K.T., Aab A., and Steitz J.A. Guide RNAs with 5′ caps and novel box C/D snoRNA-like domains for modification of snRNAs in metazoa. Curr. Biol. 14 (2004) 1985-1995
-
(2004)
Curr. Biol.
, vol.14
, pp. 1985-1995
-
-
Tycowski, K.T.1
Aab, A.2
Steitz, J.A.3
-
46
-
-
59149095154
-
A human telomerase holoenzyme protein required for Cajal body localization and telomere synthesis
-
Venteicher A.S., Abreu E.B., Meng Z., McCann K.E., Terns R.M., Veenstra T.D., Terns M.P., and Artandi S.E. A human telomerase holoenzyme protein required for Cajal body localization and telomere synthesis. Science 323 (2009) 644-648
-
(2009)
Science
, vol.323
, pp. 644-648
-
-
Venteicher, A.S.1
Abreu, E.B.2
Meng, Z.3
McCann, K.E.4
Terns, R.M.5
Veenstra, T.D.6
Terns, M.P.7
Artandi, S.E.8
-
47
-
-
0032189145
-
Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing
-
Yu Y.-T., Shu M.-D., and Steitz J.A. Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing. EMBO J. 17 (1998) 5783-5795
-
(1998)
EMBO J.
, vol.17
, pp. 5783-5795
-
-
Yu, Y.-T.1
Shu, M.-D.2
Steitz, J.A.3
-
48
-
-
0038719826
-
RNomics in Drosophila melanogaster: identification of 66 candidates for novel non-messenger RNAs
-
Yuan G., Klambt C., Bachellerie J.P., Brosius J., and Huttenhofer A. RNomics in Drosophila melanogaster: identification of 66 candidates for novel non-messenger RNAs. Nucleic Acids Res. 31 (2003) 2495-2507
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 2495-2507
-
-
Yuan, G.1
Klambt, C.2
Bachellerie, J.P.3
Brosius, J.4
Huttenhofer, A.5
-
49
-
-
61749085638
-
Trypanosoma brucei spliced leader RNA maturation by the cap 1 2′-O-ribose methyltransferase and SLA1 H/ACA snoRNA pseudouridine synthase complex
-
Zamudio J.R., Mittra B., Chattopadhyay A., Wohlschlegel J.A., Sturm N.R., and Campbell D.A. Trypanosoma brucei spliced leader RNA maturation by the cap 1 2′-O-ribose methyltransferase and SLA1 H/ACA snoRNA pseudouridine synthase complex. Mol. Cell. Biol. 29 (2009) 1202-1211
-
(2009)
Mol. Cell. Biol.
, vol.29
, pp. 1202-1211
-
-
Zamudio, J.R.1
Mittra, B.2
Chattopadhyay, A.3
Wohlschlegel, J.A.4
Sturm, N.R.5
Campbell, D.A.6
|