Has herbivory negatively impacted genetic variability in the flora of the california channel islands? Insights from Crossosoma californicum (Crossosomataceae)

International Journal of Plant Sciences

Volumn 170, Issue 3, 2009, Pages 311-322

  Wallace, Lisa E ^a   Helenurm, Kaius ^b  

^a MISSISSIPPI STATE UNIVERSITY   (United States)

^b W O Farber Center for Civic Leadership   (United States)

Author keywords

Conservation; Genetic variation; Insular endemic; Microsatellite; Population size

Indexed keywords

COLONIZATION; CONSERVATION GENETICS; DEMOGRAPHY; DIVERGENCE; ECOLOGICAL IMPACT; GENETIC MARKER; GENETIC STRUCTURE; GENETIC VARIATION; GRAZING; HERBIVORY; INVASIVE SPECIES; ISLAND; NATIVE SPECIES; POPULATION SIZE; SHRUB;

CALIFORNIA; CHANNEL ISLANDS [CALIFORNIA]; NORTH AMERICA; UNITED STATES;

CROSSOSOMA CALIFORNICUM; CROSSOSOMATACEAE;

EID: 63449090749     PISSN: 10585893     EISSN: None     Source Type: Journal    
DOI: 10.1086/596333     Document Type: Article

References (52)

1. Abdelkrim J, M Pascal, S Samadi 2005 Island colonization and founder effects: the invasion of the Guadeloupe islands by ship rats (Rattus rattus). Mol Ecol 14:2923-2931.
2. Adler JA 2003 Chronology, morphology, and deformation of marine terraces on San Clemente Island, CA. MS thesis. San Diego State University.
3. Allendorf FW 1986 Genetic drift and the loss of alleles versus heterozygosity. Zoo Biol 5:181-190.
4. Baker-Brosh KF 1996 The genetic consequences of self-thinning in two populations of Loblolly pine (Pinus taeda L.). PhD diss. University of North Carolina, Chapel Hill.
5. Beerli P, J Felsenstein 1999 Maximum likelihood estimation of migration rates and effective population numbers in two populations. Genetics 152:763-773.
6. - 2001 Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proc Natl Acad Sci USA 98:4563-4568.
7. Cole CT 2003 Genetic variation in rare and common plants. Annu Rev Ecol Evol Syst 34:213-237.
8. Cornuet JM, G Luikart 1996 Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144:2001-2014.
9. Cornuet JM, S Piry, G Luikart, A Estoup, M Solignac 1999 New methods employing multilocus genotypes to select or exclude populations as origins of individuals. Genetics 153:1989-2000.
10. Di Rienzo A, AC Peterson, JC Garza, AM Valdes, M Slatkin, NB Freimer 1994 Mutational processes of simple sequence repeat loci in human populations. Proc Natl Acad Sci USA 91:3166-3170.
11. Doyle JJ, JL Doyle 1987 A rapid DNA isolation procedure for small amounts of fresh leaf tissue. Phytochem Bull 19:11-15.
12. Ellstrand NC, DR Elam 1993 Population genetic consequences of small population size: implications for plant conservation. Annu Rev Ecol Syst 24:217-242.
13. England PR, GH Osier, LM Woodworth, ME Montgomery, DA Briscoe, R Frankham 2003 Effects of intense versus diffuse population bottlenecks on microsatellite genetic diversity and evolutionary potential. Conserv Genet 4:595-604.
14. Evanno G, S Regnaut, J Goudet 2005 Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14:2611-2620.
15. Excoffier L, PE Smouse, JM Quattro 1992 Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131:479-491.
16. Frankel OH, ME Soule 1981 Conservation and evolution. Cambridge University Press, Cambridge.
17. Furches MS, LE Wallace, K Helenurm 2008 High genetic divergence characterizes populations of the endemic plant Lithophragma maximum (Saxifragaceae) on San Clemente Island. Conserv Genet, doi:10.1007/s10592-008- 9531-3.
18. Garza JC, EG Williamson 2001 Detection of reduction in population size using data from microsatellite loci. Mol Ecol 10:305-318.
19. Gitzendanner MA, PS Soltis 2000 Patterns of genetic variation in rare and widespread plant congeners. Am J Bot 87:783-792.
20. Goudet J 1995 FSTAT, version 1.2: a computer program to calculate F-statistics. J Hered 86:485-486.
21. Halvorson WL 1994 Ecosystem restoration on the California Channel Islands. Pages 485-490 in WL Halvorson, GJ Maender, eds. The Fourth California Islands Symposium: update on the status of resources. Santa Barbara Museum of Natural History, Santa Barbara, CA.
22. Helenurm K 2001 High levels of genetic polymorphism in the insular endemic herb Jepsonia malvifolia. J Hered 92:427-432.
23. Henrickson J 1979 Crossosoma californicum. Madroño 26:100-101.
24. Huenneke LF 1991 Ecological implications of genetic variation in plant populations. Pages 31-44 in DA Falk, KE Holsinger, eds. Genetics and conservation of rare plants. Oxford University Press, New York.
25. Junak SA, DH Wilken 1998 Sensitive plant status survey, NALF San Clemente Island, California. Santa Barbara Botanic Garden, Santa Barbara, CA.
26. Keegan DR, BE Coblentz, CS Winchell 1994 Feral goat eradication on San Clemente Island, California. Wildl Soc Bull 22:56-61.
27. Kellogg EM, JL Kellogg 1994 San Clemente Island vegetation condition and trend and the elements of ecological restoration. Tierra Data Systems, Reedley, CA.
28. Kuo C-H, FJ Janzen 2003 BottleSim: a bottleneck simulation program for long-lived species with overlapping generations. Mol Ecol Notes 3:669-673.
29. Lande R 1988 Genetics and demography in biological conservation. Science 241:1455-1460.
30. Luikart G, JM Cornuet 1998 Empirical evaluation of a test for identifying recently bottlenecked populations from allele frequency data. Conserv Biol 12:228-237.
31. Lynch M, J Conery, J Burger 1995 Mutation accumulation and the extinction of small populations. Am Nat 146:489-518.
32. Martinez-Cruz B, JA Godoy, JJ Negro 2004 Population genetics after fragmentation: the case of the endangered Spanish imperial eagle (Aquila adalberti). Mol Ecol 13:2243-2255.
33. Maruyama T, PA Fuerst 1985 Population bottlenecks and non-equilibrium models in population genetics. II. Number of alleles in a small population that was formed by a recent bottleneck. Genetics 111:675-689.
34. Miller MP 1997 Tools for population genetic analysis (TFPGA), version 1.3: a Windows program for the analysis of allozyme and molecular population genetic data. Department of Biological Sciences, Northern Arizona University, Flagstaff.
35. Moran R 1996 The flora of Guadalupe Island, Mexico. California Academy of Sciences, San Francisco.
36. Morand M-E, S Brachet, P Rossignol, J Diufour, N Frascaria-Lacoste 2002 A generalized heterozygote deficiency assessed with microsatellites in a French common ash populations. Mol Ecol 11: 377-385.
37. Muhs D, K Simmons, G Kennedy, T Rockwell 2002 The last interglacial period on the Pacific Coast of North America: timing and paleoclimate. Geol Soc Am Bull 114:569-592.
38. Nei M 1978 Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:583-590.
39. Nei M, T Maruyama, R Chakraborty 1975 The bottleneck effect and genetic variability in populations. Evolution 29:1-10.
40. Nybom H 2004 Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol Ecol 13: 1143-1155.
41. O'Malley PG 1994 Animal husbandry on the three southernmost Channel Islands: a preliminary overview, 1820-1950. Pages 157-164 in WL Halvorson, GJ Maender, eds. The Fourth California Islands Symposium: update on the status of resources. Santa Barbara Museum of Natural History, Santa Barbara, CA.
42. Paetkau D, R Slade, M Burden, A Estoup 2004 Direct, real-time estimation of migration rate using assignment methods: a simulation-based exploration of accuracy and power. Mol Ecol 13:55-65.
43. Piry S, G Luikart, JM Cornuet 1999 BOTTLENECK: a computer programme for detecting recent reductions in the effective population size using allele frequency data. J Hered 90:502-503.
44. Pritchard JK, M Stephens, P Donnelly 2000 Inference of population structure using multilocus genotype data. Genetics 155:945-959.
45. Rabinowitz D 1981 Seven forms of rarity. Pages 205-217 in H Synge, ed. The biological aspects of rare plant conservation. Wiley, New York.
46. Schneider S, D Roessli, L Excoffier 2000 A software for population genetic analysis. Genetics and Biometry Laboratory, University of Geneva, Geneva. http://lgb.unige.ch/arlequin/.
47. Scogin R, A Tatsuno 1982 Reproductive biology of Crossosoma (Crossosomataceae). Aliso 10:263-267.
48. Vedder JG, DG Howell 1980 Topographic evolution of the southern California borderland during the late Cenozoic time. Pages 7-31 in DM Power, ed. The California islands: proceedings of a multidisciplinary symposium. Santa Barbara Museum of Natural History, Santa Barbara, CA.
49. Vernesi C, B Crestanello, E Pecchioli, D Tartari, D Caramelli, H Hauffe, G Bertorelle 2003 The genetic impact of demographic decline and reintroduction in the wild boar (Sus scrofa): a microsatellite analysis. Mol Ecol 12:585-595.
50. Wallace LE, K Helenurm 2005 Isolation of polymorphic microsatellite loci in Crossosoma californicum (Crossosomataceae). Mol Ecol Notes 5:246-248.
51. Watterson GA 1984 Allele frequencies after a bottleneck. Theor Popul Biol 26:387-407.
52. Yeh FC, R-C Yang, T Boyle 1999 POPGENE, version 1.31: Microsoft Window-based freeware for population genetic analysis. Molecular Biology and Technology Centre, University of Alberta, Canada. http://www.ualberta.ca/~fyeh/ index.htm.