메뉴 건너뛰기




Volumn 29, Issue 6, 2009, Pages 1442-1451

Auto- and cross-regulation of the hnRNP L proteins by alternative splicing

Author keywords

[No Author keywords available]

Indexed keywords

HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN L; MESSENGER RNA;

EID: 62849102677     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.01689-08     Document Type: Article
Times cited : (106)

References (41)
  • 1
    • 38349132539 scopus 로고    scopus 로고
    • Genome-wide analysis of alternative pre-mRNA splicing
    • Ben-Dov, C., B. Hartmann, J. Lundgren, and J. Valcárcel. 2008. Genome-wide analysis of alternative pre-mRNA splicing. J. Biol. Chem. 283:1229-1233.
    • (2008) J. Biol. Chem , vol.283 , pp. 1229-1233
    • Ben-Dov, C.1    Hartmann, B.2    Lundgren, J.3    Valcárcel, J.4
  • 2
    • 0013394889 scopus 로고    scopus 로고
    • Mechanisms of alternative pre-messenger RNA splicing
    • Black, D. L. 2003. Mechanisms of alternative pre-messenger RNA splicing. Annu. Rev. Biochem. 72:291-336.
    • (2003) Annu. Rev. Biochem , vol.72 , pp. 291-336
    • Black, D.L.1
  • 3
    • 33745899048 scopus 로고    scopus 로고
    • Alternative splicing: New insights from global analyses
    • Blencowe, B. J. 2006. Alternative splicing: new insights from global analyses. Cell 126:37-47.
    • (2006) Cell , vol.126 , pp. 37-47
    • Blencowe, B.J.1
  • 4
    • 33846135109 scopus 로고    scopus 로고
    • MicroRNAs regulate the expression of the alternative splicing factor nPTB during muscle development
    • Boutz, P. L., G. Chawla, P. Stoilov, and D. L. Black. 2007. MicroRNAs regulate the expression of the alternative splicing factor nPTB during muscle development. Genes Dev. 21:71-84.
    • (2007) Genes Dev , vol.21 , pp. 71-84
    • Boutz, P.L.1    Chawla, G.2    Stoilov, P.3    Black, D.L.4
  • 5
    • 0028077730 scopus 로고
    • Regulation of alternative splicing in vivo by overexpression of antagonistic splicing factors
    • Cáceres, J. F., S. Stamm, D. M. Helfman, and A. R. Krainer. 1994. Regulation of alternative splicing in vivo by overexpression of antagonistic splicing factors. Science 265:1706-1709.
    • (1994) Science , vol.265 , pp. 1706-1709
    • Cáceres, J.F.1    Stamm, S.2    Helfman, D.M.3    Krainer, A.R.4
  • 6
    • 0036207384 scopus 로고    scopus 로고
    • Listening to silence and understanding nonsense: Exonic mutations that affect splicing
    • Cartegni, L., S. L. Chew, and A. R. Krainer. 2002. Listening to silence and understanding nonsense: exonic mutations that affect splicing. Nat. Rev. Genet. 3:285-298.
    • (2002) Nat. Rev. Genet , vol.3 , pp. 285-298
    • Cartegni, L.1    Chew, S.L.2    Krainer, A.R.3
  • 7
    • 34347378276 scopus 로고    scopus 로고
    • PTB/nPTB switch: A posttranscriptional mechanism for programming neuronal differentiation
    • Coutinho-Mansfield, G. C., Y. Xue, Y. Zhang, and X. D. Fu. 2007. PTB/nPTB switch: a posttranscriptional mechanism for programming neuronal differentiation. Genes Dev. 21:1573-1577.
    • (2007) Genes Dev , vol.21 , pp. 1573-1577
    • Coutinho-Mansfield, G.C.1    Xue, Y.2    Zhang, Y.3    Fu, X.D.4
  • 8
    • 25844512736 scopus 로고    scopus 로고
    • Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements
    • Gehring, N. H., J. B. Kunz, G. Neu-Yilik, S. Breit, M. H. Viegas, M. W. Hentze, and A. E. Kulozik. 2005. Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements. Mol. Cell 20:65-75.
    • (2005) Mol. Cell , vol.20 , pp. 65-75
    • Gehring, N.H.1    Kunz, J.B.2    Neu-Yilik, G.3    Breit, S.4    Viegas, M.H.5    Hentze, M.W.6    Kulozik, A.E.7
  • 9
    • 22544468490 scopus 로고    scopus 로고
    • Binding of hnRNP L to the pre-mRNA processing enhancer of the herpes simplex virus thymidine kinase gene enhances both polyadenylation and nucleocytoplasmic export of intronless mRNAs
    • Guang, S., A. M. Felthauser, and J. E. Mertz. 2005. Binding of hnRNP L to the pre-mRNA processing enhancer of the herpes simplex virus thymidine kinase gene enhances both polyadenylation and nucleocytoplasmic export of intronless mRNAs. Mol. Cell. Biol. 25:6303-6313.
    • (2005) Mol. Cell. Biol , vol.25 , pp. 6303-6313
    • Guang, S.1    Felthauser, A.M.2    Mertz, J.E.3
  • 10
    • 3543095590 scopus 로고    scopus 로고
    • Heterogeneous nuclear ribonucleoprotein L interacts with the 3′ border of the internal ribosomal entry site of hepatitis C virus
    • Hahm, B., Y. K. Kim, J. H. Kim, T. Y. Kim, and S. K. Jang. 1998. Heterogeneous nuclear ribonucleoprotein L interacts with the 3′ border of the internal ribosomal entry site of hepatitis C virus. J. Virol. 72:8782-8788.
    • (1998) J. Virol , vol.72 , pp. 8782-8788
    • Hahm, B.1    Kim, Y.K.2    Kim, J.H.3    Kim, T.Y.4    Jang, S.K.5
  • 11
    • 54449101066 scopus 로고    scopus 로고
    • Separate cis-trans pathways post-transcriptionally regulate murine CD154 (CD40 ligand) expression: A novel function for CA repeats in the 3′ untranslated region
    • Hamilton, B. J., X. W. Wang, J. Collins, D. Bloch, A. Bergeron, B. Henry, B. M. Terry, M. Zan, A. J. Mouland, and W. F. Rigby. 2008. Separate cis-trans pathways post-transcriptionally regulate murine CD154 (CD40 ligand) expression: a novel function for CA repeats in the 3′ untranslated region. J. Biol. Chem. 283:25606-25616.
    • (2008) J. Biol. Chem , vol.283 , pp. 25606-25616
    • Hamilton, B.J.1    Wang, X.W.2    Collins, J.3    Bloch, D.4    Bergeron, A.5    Henry, B.6    Terry, B.M.7    Zan, M.8    Mouland, A.J.9    Rigby, W.F.10
  • 12
    • 33749515475 scopus 로고    scopus 로고
    • An exonic splicing silencer represses spliceosome assembly after ATP-dependent exon recognition
    • House, A. E., and K. W. Lynch. 2006. An exonic splicing silencer represses spliceosome assembly after ATP-dependent exon recognition. Nat. Struct. Mol. Biol. 13:937-944.
    • (2006) Nat. Struct. Mol. Biol , vol.13 , pp. 937-944
    • House, A.E.1    Lynch, K.W.2
  • 13
    • 21244469877 scopus 로고    scopus 로고
    • Intronic CA-repeat and CA-rich elements: A new class of regulators of mammalian alternative splicing
    • Hui, J., L.-H. Hung, M. Heiner, S. Schreiner, N. Neumüller, G. Reither, S. A. Haas, and A. Bindereif. 2005. Intronic CA-repeat and CA-rich elements: a new class of regulators of mammalian alternative splicing. EMBO J. 24:1988-1998.
    • (2005) EMBO J , vol.24 , pp. 1988-1998
    • Hui, J.1    Hung, L.-H.2    Heiner, M.3    Schreiner, S.4    Neumüller, N.5    Reither, G.6    Haas, S.A.7    Bindereif, A.8
  • 14
    • 0042808438 scopus 로고    scopus 로고
    • Novel functional role of CA repeats and hnRNP L in RNA stability
    • Hui, J., G. Reither, and A. Bindereif. 2003. Novel functional role of CA repeats and hnRNP L in RNA stability. RNA. 9:931-936.
    • (2003) RNA , vol.9 , pp. 931-936
    • Hui, J.1    Reither, G.2    Bindereif, A.3
  • 15
    • 0037217365 scopus 로고    scopus 로고
    • HnRNP L stimulates splicing of the eNOS gene by binding to variable-length CA repeats
    • Hui, J., K. Stangl, W. L. Lane, and A. Bindereif. 2003. HnRNP L stimulates splicing of the eNOS gene by binding to variable-length CA repeats. Nat. Struct. Biol. 10:33-37.
    • (2003) Nat. Struct. Biol , vol.10 , pp. 33-37
    • Hui, J.1    Stangl, K.2    Lane, W.L.3    Bindereif, A.4
  • 16
    • 38649129366 scopus 로고    scopus 로고
    • Diverse roles of hnRNP L in mammalian mRNA processing: A combined microarray and RNAi analysis
    • Hung, L.-H., M. Heiner, J. Hui, S. Schreiner, V. Benes, and A. Bindereif. 2008. Diverse roles of hnRNP L in mammalian mRNA processing: a combined microarray and RNAi analysis. RNA. 14:284-296.
    • (2008) RNA , vol.14 , pp. 284-296
    • Hung, L.-H.1    Heiner, M.2    Hui, J.3    Schreiner, S.4    Benes, V.5    Bindereif, A.6
  • 17
    • 34247330971 scopus 로고    scopus 로고
    • Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements
    • Lareau, L. F., M. Inada, R. E. Green, J. C. Wengrod, and S. E. Brenner. 2007. Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements. Nature 446:926-929.
    • (2007) Nature , vol.446 , pp. 926-929
    • Lareau, L.F.1    Inada, M.2    Green, R.E.3    Wengrod, J.C.4    Brenner, S.E.5
  • 18
    • 0029142841 scopus 로고
    • hnRNP L binds a cis-acting RNA sequence element that enables intron-independent gene expression
    • Liu, X., and J. E. Mertz. 1995. hnRNP L binds a cis-acting RNA sequence element that enables intron-independent gene expression. Genes Dev. 9:1766-1780.
    • (1995) Genes Dev , vol.9 , pp. 1766-1780
    • Liu, X.1    Mertz, J.E.2
  • 19
    • 41349092509 scopus 로고    scopus 로고
    • Multilevel regulation of gene expression by microRNAs
    • Makeyev, E. V., and T. Maniatis. 2008. Multilevel regulation of gene expression by microRNAs. Science 319:1789-1790.
    • (2008) Science , vol.319 , pp. 1789-1790
    • Makeyev, E.V.1    Maniatis, T.2
  • 20
    • 34547212309 scopus 로고    scopus 로고
    • The microRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicing
    • Makeyev, E. V., J. Zhang, M. A. Carrasco, and T. Maniatis. 2007. The microRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicing. Mol. Cell 27:435-448.
    • (2007) Mol. Cell , vol.27 , pp. 435-448
    • Makeyev, E.V.1    Zhang, J.2    Carrasco, M.A.3    Maniatis, T.4
  • 21
    • 18344364099 scopus 로고    scopus 로고
    • Understanding alternative splicing: Toward a cellular code
    • Matlin, A. J., F. Clark, and C. W. Smith. 2005. Understanding alternative splicing: toward a cellular code. Nat. Rev. Mol. Cell. Biol. 6:386-398.
    • (2005) Nat. Rev. Mol. Cell. Biol , vol.6 , pp. 386-398
    • Matlin, A.J.1    Clark, F.2    Smith, C.W.3
  • 22
    • 0026543785 scopus 로고
    • Regulation of alternative pre-mRNA splicing by hnRNP A1 and splicing factor SF2
    • Mayeda, A., and A. R. Krainer. 1992. Regulation of alternative pre-mRNA splicing by hnRNP A1 and splicing factor SF2. Cell 68:365-375.
    • (1992) Cell , vol.68 , pp. 365-375
    • Mayeda, A.1    Krainer, A.R.2
  • 23
    • 34748892292 scopus 로고    scopus 로고
    • Combinatorial control of signal-induced exon repression by hnRNP L and PSF
    • Melton, A. A., J. Jackson, J. Wang, and K. W. Lynch. 2007. Combinatorial control of signal-induced exon repression by hnRNP L and PSF. Mol. Cell. Biol. 27:6972-6984.
    • (2007) Mol. Cell. Biol , vol.27 , pp. 6972-6984
    • Melton, A.A.1    Jackson, J.2    Wang, J.3    Lynch, K.W.4
  • 24
    • 0030832044 scopus 로고    scopus 로고
    • A complex intronic splicing enhancer from the c-src pre-mRNA activates inclusion of a heterologous exon
    • Modafferi, E. F., and D. L. Black. 1997. A complex intronic splicing enhancer from the c-src pre-mRNA activates inclusion of a heterologous exon. Mol. Cell. Biol. 17:6537-6545.
    • (1997) Mol. Cell. Biol , vol.17 , pp. 6537-6545
    • Modafferi, E.F.1    Black, D.L.2
  • 25
    • 0036337915 scopus 로고    scopus 로고
    • A genomic view of alternative splicing
    • Modrek, B., and C. Lee. 2002. A genomic view of alternative splicing. Nat. Genet. 30:13-19.
    • (2002) Nat. Genet , vol.30 , pp. 13-19
    • Modrek, B.1    Lee, C.2
  • 26
    • 33947305594 scopus 로고    scopus 로고
    • Ni, J. Z., L. Grate, J. P. Donohue, C. Preston, N. Nobida, G. O'Brien, L. Shiue, T. A. Clark, J. E. Blume, and M. Ares, Jr. 2007. Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay. Genes Dev. 21:708-718.
    • Ni, J. Z., L. Grate, J. P. Donohue, C. Preston, N. Nobida, G. O'Brien, L. Shiue, T. A. Clark, J. E. Blume, and M. Ares, Jr. 2007. Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay. Genes Dev. 21:708-718.
  • 27
    • 48749100692 scopus 로고    scopus 로고
    • Regulation of CD45 alternative splicing by heterogeneous ribonucleoprotein, hnRNP LL
    • Oberdoerffer, S., L. F. Moita, D. Neems, R. P. Freitas, N. Hacohen, and A. Rao. 2008. Regulation of CD45 alternative splicing by heterogeneous ribonucleoprotein, hnRNP LL. Science 321:686-691.
    • (2008) Science , vol.321 , pp. 686-691
    • Oberdoerffer, S.1    Moita, L.F.2    Neems, D.3    Freitas, R.P.4    Hacohen, N.5    Rao, A.6
  • 28
    • 30944449484 scopus 로고    scopus 로고
    • Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression
    • Pan, Q., A. L. Saltzman, Y. K. Kim, C. Misquitta, O. Shai, L. E. Maquat, B. J. Frey, and B. J. Blencowe. 2006. Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression. Genes Dev. 20:153-158.
    • (2006) Genes Dev , vol.20 , pp. 153-158
    • Pan, Q.1    Saltzman, A.L.2    Kim, Y.K.3    Misquitta, C.4    Shai, O.5    Maquat, L.E.6    Frey, B.J.7    Blencowe, B.J.8
  • 29
    • 0024835141 scopus 로고
    • A novel heterogeneous nuclear RNP protein with a unique distribution on nascent transcripts
    • Piñol-Roma, S., M. S. Swanson, J. G. Gall, and G. Dreyfuss. 1989. A novel heterogeneous nuclear RNP protein with a unique distribution on nascent transcripts. J. Cell Biol. 109:2575-2587.
    • (1989) J. Cell Biol , vol.109 , pp. 2575-2587
    • Piñol-Roma, S.1    Swanson, M.S.2    Gall, J.G.3    Dreyfuss, G.4
  • 30
    • 23844471326 scopus 로고    scopus 로고
    • HnRNP L represses exon splicing via a regulated exonic splicing silencer
    • Rothrock, C. R., A. E. House, and K. W. Lynch. 2005. HnRNP L represses exon splicing via a regulated exonic splicing silencer. EMBO J. 24:2792-2802.
    • (2005) EMBO J , vol.24 , pp. 2792-2802
    • Rothrock, C.R.1    House, A.E.2    Lynch, K.W.3
  • 31
    • 46149112362 scopus 로고    scopus 로고
    • Regulation of multiple core spliceosomal proteins by alternative splicing-coupled nonsense-mediated mRNA decay
    • Saltzman, A. L., Y. K. Kim, Q. Pan, M. M. Fagnani, L. E. Maquat, and B. J. Blencowe. 2008. Regulation of multiple core spliceosomal proteins by alternative splicing-coupled nonsense-mediated mRNA decay. Mol. Cell. Biol. 28:4320-4330.
    • (2008) Mol. Cell. Biol , vol.28 , pp. 4320-4330
    • Saltzman, A.L.1    Kim, Y.K.2    Pan, Q.3    Fagnani, M.M.4    Maquat, L.E.5    Blencowe, B.J.6
  • 33
    • 0033555522 scopus 로고    scopus 로고
    • Regulation of human vascular endothelial growth factor mRNA stability in hypoxia by heterogeneous nuclear ribonucleoprotein L
    • Shih, S. C., and K. P. Claffey. 1999. Regulation of human vascular endothelial growth factor mRNA stability in hypoxia by heterogeneous nuclear ribonucleoprotein L. J. Biol. Chem. 274:1359-1365.
    • (1999) J. Biol. Chem , vol.274 , pp. 1359-1365
    • Shih, S.C.1    Claffey, K.P.2
  • 34
    • 4444272979 scopus 로고    scopus 로고
    • Cell signalling and the control of pre-mRNA splicing
    • Shin, C., and J. L. Manley. 2004. Cell signalling and the control of pre-mRNA splicing. Nat. Rev. Mol. Cell. Biol. 5:727-738.
    • (2004) Nat. Rev. Mol. Cell. Biol , vol.5 , pp. 727-738
    • Shin, C.1    Manley, J.L.2
  • 35
    • 3142640840 scopus 로고    scopus 로고
    • Alternatively spliced isoforms of a novel stromal RNA regulating factor
    • Shur, I., D. Ben-Avraham, and D. Benayahu. 2004. Alternatively spliced isoforms of a novel stromal RNA regulating factor. Gene 334:113-121.
    • (2004) Gene , vol.334 , pp. 113-121
    • Shur, I.1    Ben-Avraham, D.2    Benayahu, D.3
  • 36
    • 0034256020 scopus 로고    scopus 로고
    • Alternative pre-mRNA splicing: The logic of combinatorial control
    • Smith, C. W., and J. Valcárcel. 2000. Alternative pre-mRNA splicing: the logic of combinatorial control. Trends Biochem. Sci. 25:381-388.
    • (2000) Trends Biochem. Sci , vol.25 , pp. 381-388
    • Smith, C.W.1    Valcárcel, J.2
  • 37
    • 34547205013 scopus 로고    scopus 로고
    • Crossregulation and functional redundancy between the splicing regulator PTB and its paralogs nPTB and ROD1
    • Spellman, R., M. Llorian, and C. W. Smith. 2007. Crossregulation and functional redundancy between the splicing regulator PTB and its paralogs nPTB and ROD1. Mol. Cell 27:420-434.
    • (2007) Mol. Cell , vol.27 , pp. 420-434
    • Spellman, R.1    Llorian, M.2    Smith, C.W.3
  • 38
    • 52949090808 scopus 로고    scopus 로고
    • A cell-based screen for splicing regulators identifies hnRNP LL as a distinct signal-induced repressor of CD45 variable exon 4
    • Topp, J. D., J. Jackson, A. A. Melton, and K. W. Lynch. 2008. A cell-based screen for splicing regulators identifies hnRNP LL as a distinct signal-induced repressor of CD45 variable exon 4. RNA 14:2038-2049.
    • (2008) RNA , vol.14 , pp. 2038-2049
    • Topp, J.D.1    Jackson, J.2    Melton, A.A.3    Lynch, K.W.4
  • 39
    • 84889426403 scopus 로고    scopus 로고
    • 3 -Terminal attachment of fluoroescent dyes and biotin
    • E. Westhof, A. Bindereif, A. Schön, and R. K. Hartmann ed, Wiley-VCH, New York, NY
    • Willkomm, D. K., and R. K. Hartmann. 2005. 3 -Terminal attachment of fluoroescent dyes and biotin, p. 86-94. In E. Westhof, A. Bindereif, A. Schön, and R. K. Hartmann (ed.), Handbook of RNA biochemistry. Wiley-VCH, New York, NY.
    • (2005) Handbook of RNA biochemistry , pp. 86-94
    • Willkomm, D.K.1    Hartmann, R.K.2
  • 40
    • 0346124413 scopus 로고    scopus 로고
    • Autoregulation of polypyrimidine tract binding protein by alternative splicing leading to nonsense-mediated decay
    • Wollerton, M. C., C. Gooding, E. J. Wagner, M. A. Garcia-Blanco, and C. W. Smith. 2004. Autoregulation of polypyrimidine tract binding protein by alternative splicing leading to nonsense-mediated decay. Mol. Cell 13:91-100.
    • (2004) Mol. Cell , vol.13 , pp. 91-100
    • Wollerton, M.C.1    Gooding, C.2    Wagner, E.J.3    Garcia-Blanco, M.A.4    Smith, C.W.5
  • 41
    • 2442441507 scopus 로고    scopus 로고
    • Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals
    • Yeo, G., and C. B. Burge. 2004. Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals. J. Comp. Biol. 11:377-394.
    • (2004) J. Comp. Biol , vol.11 , pp. 377-394
    • Yeo, G.1    Burge, C.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.