Evolutionary history of the fish genus astyanax baird & Girard (1854) (Actinopterygii, Characidae) in mesoamerica reveals multiple morphological homoplasies

BMC Evolutionary Biology

Volumn 8, Issue 1, 2008, Pages

  Ornelas García, Claudia Patricia ^a   Domínguez Domínguez, Omar ^b   Doadrio, Ignacio ^a  

^a MUSEO NACIONAL DE CIENCIAS NATURALES   (Spain)

^b UNIVERSIDAD NACIONAL AUTÓNOMA DE MÉXICO   (Mexico)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME B;

ANIMAL; ARTICLE; CENTRAL AMERICA; CLASSIFICATION; FISH; GENETICS; HISTOLOGY; MITOCHONDRIAL GENE; MOLECULAR EVOLUTION; PHYLOGENY; POLYMERASE CHAIN REACTION;

ANIMALS; CENTRAL AMERICA; CYTOCHROMES B; EVOLUTION, MOLECULAR; FISHES; GENES, MITOCHONDRIAL; PHYLOGENY; POLYMERASE CHAIN REACTION;

EID: 62649100168     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-8-340     Document Type: Article

References (86)

1. Punta de Morro, an interesting barrier for distributional patterns of Continental fishes in North and Central Veracruz, Mexico. SHO Contreras-Balderas ML Lozano-Vilano, Publ Biol Fac Cienc Biol Univ Autm Nuevo Leon México 1996 16 37 42
2. Historical biogeography of some river basins in Central Mexico evidenced by their goodeine freshwater fishes: A preliminary hypothesis using secondary Brooks Parsimony Analysis (BPA). O Domínguez-Domínguez I Doadrio G Pérez-Ponce de Len, J Biogeogr 2006 33 1437 1447 10.1111/j.1365-2699. 2006.01526.x
3. Distributional patterns of freshwater taxa (fishes, crustaceans and plants) from the Mexican Transition Zone. L Huidobro JJ Morrone JL Villalobos F Alvarez, J Biogeogr 2006 33 4 731 741 10.1111/j.1365-2699.2005.01400.x
4. Biogeographical regions under track and cladistic scrutiny. JJ Morrone, J Biogeogr 2002 29 2 149 152 10.1046/j.1365-2699.2002.00662.x
5. Phylogeny of the Mexican coastal leopard frogs of the Rana berlandieri group based on mtDNA sequences. A Zaldivar-Riveron V Leon-Regagnon ANM de Oca, Mol Phylogenet Evol 2004 30 1 38 49 10.1016/S1055-7903(03)00141-6 15022756
6. Seismic activity along the Central America Volcanic Arc: Is it related to subduction of the Cocos plate? M Guzman-Speziale C Valdes-Gonzalez E Molina JM Gomez, Tectonophysics 2005 400 1?4 241 254 10.1016/j.tecto.2005.03.006
7. Paleogeography of the Caribbean region: Implications for cenozoic biogeography. MA Iturralde-Vinent RDE MacPhee, B Am Mus Nat Hist 1999 238 1 95
8. Comparative mtDNA phylogeography of neotropical freshwater fishes: testing shared history to infer the evolutionary landscape of lower Central America. E Bermingham AP Martin, Mol Ecol 1998 7 4 499 517 10.1046/j.1365-294x. 1998.00358.x 9628002
9. Systematics and evolution of lower Central American cichlids inferred from analysis of cytochrome b gene sequences. AP Martin E Bermingham, Mol Phylogenet Evol 1998 9 2 192 203 10.1006/mpev.1997.0461 9562979
10. Comparative phylogeography of livebearing fishes in the genera Poeciliopsis and Poecilia (Poeciliidae : Cyprinodontiformes) in central Mexico. M Mateos, J Biogeogr 2005 32 5 775 780 10.1111/j.1365-2699.2005.01236.x
11. Historical Biogeography of the Livebearing Fish genus Poeciliopsis (Poecilidae: Cyprinodontiformes). M Mateos OI Sanjur RC Vrijenhoeck, Evolution 2002 56 972 984 12093032
12. Evolutionary history of the genus Rhamdia (Teleostei: Pimelodidae) in Central America. A Perdices EAM Bermingham I Doadrio, Mol Phylogenet Evol 2002 25 172 189 10.1016/S1055-7903(02)00224-5 12383759
13. Evolutionary history of the synbranchid eels (Teleostei: Synbranchidae) in Central America and the Caribbean islands inferred from their molecular phylogeny. A Perdices I Doadrio E Bermingham, Mol Phylogenet Evol 2005 37 2 460 473 10.1016/j.ympev.2005.01.020 16223677
14. Patterns of distribution of the Central American ichthyofauna. WA Bussing, The Great American Biotic Interchange New York: Plenum Press, New York, Stehli FG, Webb SD, 1985 453 473
15. Colonization, population expansion, and lineage turnover: phylogeography of Mesoamerican characiform fish. RG Reeves E Bermingham, Biol J Linn Soc 2006 88 2 235 255 10.1111/j.1095-8312.2006.00619.x
16. Molecular Markers, Natural History and Evolution. JC Avise, New York, NY 1994
17. Molecular Support for Vicariance as a Source of Diversity in Rain-Forest. L Joseph C Moritz A Hugall, Proc R Soc Lond [Biol] 1995 260 1358 177 182 10.1098/rspb.1995.0077
18. Gene Genealogy and Differentiation among Arboreal Spiny Rats (Rodentia, Echimyidae) of the Amazon Basin ? a Test of the Riverine Barrier Hypothesis. JL Patton MNF Dasilva JR Malcolm, Evolution 1994 48 4 1314 1323 10.2307/2410388
19. Separating Population-Structure from Population History ? a Cladistic-Analysis of the Geographical-Distribution of Mitochondrial-DNA Haplotypes in the Tiger Salamander, Ambystoma-Tigrinum. AR Templeton E Routman CA Phillips, Genetics 1995 140 2 767 782 7498753
20. The geologic evolution of the Central America Isthmus. A Coates JA Oblando, Evolution and Environmental in Tropical America Chicago: Chicago University Press, Chicago, Jackson JBC, Budd AF, Coates AG, 1996 21 56
21. Derivation of Freshwater Fish Fauna of Central America. GS Myers, Copeia 1966 4 766 10.2307/1441405
22. Phylogeny and biogeography of 91 species of heroine cichlids (Teleostei: Cichlidae) based on sequences of the cytochrome b gene. GA Concheiro Perez O Rican G Orti E Bermingham I Doadrio R Zardoya, Mol Phylogenet Evol 2007 43 1 91 110 10.1016/j.ympev.2006.08.012 17045493
23. Vicariance Model of Caribbean Biogeography. DE Rosen, Syst Zool 1975 24 4 431 464 10.2307/2412905
24. Vicariant patterns and historical explanation in biogeography. DE Rosen, Syst Zool 1978 27 159 188 10.2307/2412970
25. CHRONOLOGY OF FLUCTUATING SEA LEVELS SINCE THE TRIASSIC. BU Haq J Hardenbol PR Vail, Science 1987 235 4793 1156 1167 10.1126/science.235.4793.1156 17818978
26. Phylogeography of the harlequin beetle-riding pseudoscorpion and the rise of the Isthmus of Panama. JA Zeh DW Zeh MM Bonilla, Mol Ecol 2003 12 10 2759 2769 10.1046/j.1365-294X.2003.01914.x 12969478
27. Cenozoic biogeography and evolution in direct-developing frogs of Central America (Leptodactylidae: Eleutherodactylus) as inferred from a phylogenetic analysis of nuclear and mitochondrial genes. AJ Crawford EN Smith, Mol Phylogenet Evol 2005 35 3 536 555 10.1016/j.ympev.2005.03.006 15878124
28. Fossil calibration of molecular clocks and the divergence times of geminate species pairs separated by the Isthmus of Panama. PB Marko, Mol Biol Evol 2002 19 11 2005 2021 12411609
29. Descriptions of new species of fishes collected in Texas, New Mexico and Sonora, by Mr. John H. Clark, on the U. S. and Mexican Boundary Survey, and in Texas by Capt. Stewart Van Vliet, U.S.A. SF Baird CF Girard, Proc Nat Acad Sci 1854 24 29
30. Relationships among characiform fishes inferred from analysis of nuclear and mitochondrial gene sequences. D Calcagnotto SA Schaefer R DeSalle, Mol Phylogenet Evol 2005 36 1 135 153 10.1016/j.ympev.2005.01.004 15904862
31. The radiation of characiform fishes and the limits of resolution of mitochondrial ribosomal DNA sequences. G Ortí A Meyer, Syst Biol 1997 46 1 75 100 10.2307/2413637 11975355
32. Palaeoichthyofaunas from the Lower Oligocene and Miocene of the Arabian Plate: palaeoecological and palaeobiogeographical implications. O Otero M Gayet, Palaeogeography Palaeoclimatology Palaeoecology 2001 165 1?2 141 169 10.1016/S0031-0182(00)00158-9
33. Middle Maastrichtian vertebrates (fishes, amphibians, dinosaurs and other reptiles, mammals) from Pajcha Pata (Bolivia). Biostratigraphic, palaeoecologic and palaeobiogeographic implications. M Gayet LG Marshall T Sempere FJ Meunier H Cappetta JC Rage, Palaeogeography Palaeoclimatology Palaeoecology 2001 169 1?2 39 68 10.1016/S0031-0182(01)00214-0
34. Catalog of fishes. Updated database version of June 2007. WN Eschmeyer, FishBase 2007
35. Genera Incertae Sedis in Characidae. FCT Lima LR Malabarba PA Buckup JF Pezzi Da Silva RP Vari A Harold R Benine OT Oyakawa CS Pavanelli NA Menezes, Checklist of the Freshwater Fishes of South and Central America Porto Alegre Brasil: EDIPUCRS, Reis RE, Kullander SO, Ferraris CJ Jr, 2003 106 168
36. Genetic divergence between cave and surface populations of Astyanax in Mexico (Characidae, Teleostei). U Strecker L Bernatchez H Wilkens, Mol Ecol 2003 12 3 699 710 10.1046/j.1365-294X.2003.01753.x 12675825
37. Phylogeography of surface and cave Astyanax (Teleostei) from Central and North America based on cytochrome b sequence data. U Strecker VH Faundez H Wilkens, Mol Phylogenet Evol 2004 33 2 469 481 10.1016/j.ympev.2004.07.001 15336680
38. Evidence for Multiple Genetic Forms with Similar Eyeless Phenotypes in the Blind Cavefish, Astyanax mexicanus. TE Dowling DP Martasian WR Jeffery, Mol Biol Evol 2002 19 4 446 455 11919286
39. Cave fish as a model system in evolutionary developmental biology. WR Jeffery, Developmental Biology 2001 231 1 12 10.1006/dbio.2000.0121 11180948
40. Astyanax armandoi, n. sp. from Chiapas, Mexico (Pisces, Ostariophysi: Characidae) with a Comparison to the nominal species A. aeneus and A. mexicanus. ML Lozano-Vilano S Contreras-Balderas, Universidad y Ciencia 1990 7 95 107
41. Análisis morfométrico del género Astyanax (Pisces: Characidae) en México. J Paulo-Maya, México, D. F. : Instituto Politécnico Nacional 1994
42. Integrating molecular genetics and ecology in studies of adaptive radiation: whitefish, Coregonus sp., as a case study. L Bernatchez A Chouinard GQ Lu, Biol J Linn Soc 1999 68 1?2 173 194 10.1111/j.1095-8312.1999.tb01165.x
43. Holarctic phylogeography of Arctic charr (Salvelinus alpinus L.) inferred from mitochondrial DNA sequences. PC Brunner MR Douglas A Osinov CC Wilson L Bernatchez, Evolution 2001 55 3 573 586 10.1554/0014-3820(2001)055[0573:HPOACS] 2.0.CO;2 11327164
44. Speciation in rapidly diverging systems: lessons from Lake Malawi. PD Danley TD Kocher, Mol Ecol 2001 10 5 1075 1086 10.1046/j.1365-294X.2001.01283.x 11380867
45. A checklist of the freshwater ichthyofauna from El Peten and Alta Verapaz, Guatemala, with notes for its conservation and management. ME Valdez-Moreno, Zootaxa 2005 1072 43 60
46. A New Tetragonopterine Characid Fish From Guatemala. DE Rosen, Am Mus Novit 1970 2435 1 17
47. Origin of the Characid Fish Genus Bramocharax and Description of a Second, More Primitive, Species in Guatemala. DE Rosen, Am Mus Novit 1972 2500 1 21
48. Astyanax armandoi, a Junior Synonym of Astyanax aeneus (Teleostei: Characidae). JJ Schmitter-Soto ME Valdez-Moreno R Rodiles-Hernandez AA González-Díaz, Copeia 2008 2 409 413 10.1643/CI-07-012
49. Problemas nomenclaturales de las formas mexicanas del género Astyanax (Pisces: Characidae). S Contreras-Balderas ML Lozano-Vilano, Zoología Informa 1988 38 1 13
50. Genetic analysis of cavefish reveals molecular convergence in the evolution of albinism. ME Protas C Hersey D Kochanek Y Zhou H Wilkens WR Jeffery LI Zon R Borowsky CJ Tabin, Nat Genet 2006 38 1 107 111 10.1038/ng1700 16341223
51. Convergent evolution of the cavefish Astyanax (Characidae, Teleostei): genetic evidence from reduced eye-size and pigmentation. H Wilkens U Strecker, Biol J Linn Soc 2003 80 4 545 554 10.1111/j.1095-8312.2003.00230.x
52. Freshwater Fishes of México. R Miller, Chicago: The University of Chicago Press 2005 1
53. Space Time patterns of Cenozoic arc volcanism in central México: from the Sierra Madre Occidental to the Mexican Volcanic Belt. L Ferrari M Lpez-Martínez G Aguirre-Díaz G Carrasco-Ñez, Geology 1999 27 303 306 10.1130/0091-7613(1999)027<0303:STPOCA>2.3.CO;2
54. Phylogenetic relationships among the Ibero-African cobitids (Cobitis, cobitidae) based on cytochrome b sequence data. I Doadrio A Perdices, Mol Phylogenet Evol 2005 37 2 484 493 10.1016/j.ympev.2005.07.009 16150615
55. Phylogenetic relationships within the aplocheiloid fish genus Rivulus (Cyprinodontiformes, Rivulidae): Implications for Caribbean and Central American biogeography. WJ Murphy GE Collier, Mol Biol Evol 1996 13 5 642 649 8676738
56. Final closure of Panama and the onset of northern hemisphere glaciation. G Bartoli M Sarnthein M Weinelt H Erlenkeuser D Garbe-Schonberg DW Lea, Earth Planet Sci Lett 2005 237 1-2 33 44 10.1016/j.epsl.2005.06.020
57. A phylogenetic and biogeographic perspective on the evolution of poeciliid fishes. T Hrbek J Seckinger A Meyer, Mol Phylogenet Evol 2007 43 3 986 998 10.1016/j.ympev.2006.06.009 17185005
58. The late Miocene Panama isthmian strait. L Collins A Coates W Berggren M Aubry J Zhang, Geology 1996 24 8 687 690 10.1130/0091-7613(1996)024<0687: TLMPIS>2.3.CO;2
59. Late Miocene volcanism and intra-arc tectonics during the early development of the Trans-Mexican Volcanic Belt. L Ferrari S Conticelli CM Potrone P Manetti, Tectonophysics 2000 318 161 185 10.1016/S0040-1951(99)00310-8
60. Geology, geochronology and tectonic setting of late Cenozoic volcanism along the southwestern Gulf of Mexico: The Eastern Alkaline Province revisited. L Ferrari T Tagami M Eguchi MT Orozco-Esquivel CM Petrone J Jacobo-Albarran M Lopez-Martinez, J Volcanol Geotherm Res 2005 146 4 284 306 10.1016/j.jvolgeores. 2005.02.004
61. Phylogeography and Speciation of the Morphologically Variable, Widespread Species Bufo valliceps, Based on Molecular Evidence from mtDNA. DG Mulcahy JR Mendelson, Mol Phylogenet Evol 2000 17 2 173 189 10.1006/mpev.2000.0827 11083932
62. Historical biogeography of lowland species of toads (Bufo) across the Trans-Mexican Neovolcanic Belt and the Isthmus of Tehuantepec. DG Mulcahy BH Morrill JR Mendelson, J Biogeogr 2006 33 11 1889 1904 10.1111/j.1365-2699.2006. 01546.x
63. The biogeography of lower Mesoamerican freshwater fishes. SA Smith E Bermingham, J Biogeogr 2005 32 10 1835 1854 10.1111/j.1365-2699.2005.01317.x
64. Active seismic deformation in the grabens of northern Central America and its relationship to the relative motion of the North America-Caribbean plate boundary. M Guzman-Speziale, Tectonophysics 2001 337 1-2 39 51 10.1016/S0040-1951(01)00110-X
65. Preservation of Avian Blood and Tissue Samples for DNA Analyses. G Seutin BN White PT Boag, Can J Zool 1991 69 1 82 90 10.1139/z91-013
66. Molecular cloning: A laboratory manual. J Sambrook E Fritsch T Maniatis, New York: Cold Spring Laboratory 1989
67. Molecular systematics of the damselfishes (Teleostei : Pomacentridae): Bayesian phylogenetic analyses of mitochondrial and nuclear DNA sequences. B Quenouille E Bermingham S Planes, Mol Phylogenet Evol 2004 31 1 66 88 10.1016/S1055-7903(03)00278-1 15019609
68. MrBayes: Bayesian inference of phylogeny. JP Huelsenbeck F Ronquist, Bioinformatics 2001 17 754 755 10.1093/bioinformatics/17.8.754 11524383
69. MODELTEST: testing the model of DNA substitution. D Posada KA Crandall, Bioinformatics 1998 14 9 817 818 10.1093/bioinformatics/14.9.817 9918953
70. Tracer [computer program]. A Rambaut A Drummond, 1.4 2007 http://tree.bio.ed.ac.uk/software/tracer;;
71. PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods). DL Swofford, Sunderland, Massachussetts: Sinauer Associates 1998 12064242
72. NONA. Noname (a bastard son of Pee-Wee). PA Goloboff, 2.0 (32 bit version) edn. New York Program and documentation Computer program distributed by J.M. Carpenter, Department of Entomology, American Museum of Natural History New York, 1993 1993
73. Winclada (BETA). KC Nixon, New York: Published by the author, ITHACA, NY 0.9.9 1999
74. Simple Diagnostic Statistical Tests of Models for DNA Substitution. N Goldman, Journal of Molecular Evolution 1993 37 6 650 661 8114118
75. A nonparametric approach to estimating divergence times in the absence of rate constancy. MJ Sanderson, Mol Biol Evol 1997 14 12 1218 1231
76. Phylogenetic methods come of age: Testing hypotheses in an evolutionary context. JP Huelsenbeck B Rannala, Science 1997 276 5310 227 232 10.1126/science.276.5310.227 9092465
77. r8s bootkit 2. http://www.bergianska.se/index-forskning-soft.html
78. Mesquite: a modular system for evolutionary analysis V. 2.01.
79. The changing course of the Orinoco River during the Neogene: A review. ML Díaz de Gamero, Palaeogeography Palaeoclimatology Palaeoecology 1996 123 1-4 385 402 10.1016/0031-0182(96)00115-0
80. The temporal context for the diversification of Neotropical Fishes. JG Lundberg, Phylogeny and Classification of Neotropical Fishes Porto Alegre, Brasil EDIPUCRS, Malabarba LR, Reis RE, Vari RP, Lucena ZMS, Lucena CAS, 1998 49 68
81. Miocene Characid Fishes from Colombia - Evolutionary Stasis and Extirpation. JG Lundberg A Machadoallison RF Kay, Science 1986 234 4773 208 209 10.1126/science.234.4773.208 17746480
82. Space-time patterns of Cenozoic arc volcanism in central Mexico: From the Sierra Madre Occidental to the Mexican Volcanic Belt. L Ferrari M Lopez-Martinez G Aguirre-Diaz G Carrasco-Nunez, Geology 1999 27 4 303 306 10.1130/0091-7613(1999)027<0303:STPOCA>2.3.CO;2
83. DNA barcoding Australia's fish species. RD Ward TS Zemlak BH Innes PR Last PDN Hebert, Philos Trans R Soc Lond, B 2005 360 1462 1847 1857 10.1098/rstb.2005.1716
84. Phylogenetic relationships of Iberian cyprinids: systematic and biogeographical implications. R Zardoya I Doadrio, Proc R Soc Lond [Biol] 1998 265 1403 1365 1372 10.1098/rspb.1998.0443
85. The Simple Fool's Guide to PCR. S Palumbi AP Martin S Romano WO McMillan L Stice G Grabowski, Special publication, Honolulu: University Hawaii Press 2.0 1991
86. Phylogeny of the neotropical killifish family Rivulidae (Cyprinodontiformes, Aplocheiloidei) inferred from mitochondrial DNA sequences. WJ Murphy JE Thomerson GE Collier, Mol Phylogenet Evol 1999 13 2 289 301 10.1006/mpev.1999.0656 10603257