Phylogenetic relationships within the aplocheiloid fish genus Rivulus (Cyprinodontiformes, Rivulidae): Implications for Caribbean and Central American biogeography

Molecular Biology and Evolution

Volumn 13, Issue 5, 1996, Pages 642-649

  Murphy, William J ^a   Collier, Glen E ^a  

^a UNIVERSITY OF TULSA   (United States)

Author keywords

Aplocheiloid; Caribbean biogeography; cyprinodont; mitochondrial DNA; phylogeny; Rivulus

Indexed keywords

ARTICLE; CARIBBEAN ISLANDS; CENTRAL AMERICA; EVOLUTION; FISH; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; NONHUMAN; PHYLOGENY; SPECIES DIFFERENCE;

EID: 0030001729     PISSN: 07374038     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.molbev.a025624     Document Type: Article

References (65)

1. BERNARDI, G., and D. A. POWERS. 1995. Phylogenetic relationships among nine species from the genus Fundulus (Cyprinodontiformes, Fundulidae) inferred from sequences of the cytochrome b gene. Copeia 1995:469-473.
2. BLOCK, B. A., J. R. FINNERTY, A. F. R. STEWART, and J. KIDD. 1993. Evolution of endothermy in fish: mapping physiological traits on a molecular phylogeny. Science 260:210-214.
3. BREMER, K. 1988. The limits of amino acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42:795-803.
4. BRIGGS, J. C. 1984. Freshwater fishes and biogeography of Central America and the Antilles. Syst. Zool. 33:428-435.
5. BRIGGS, J. C. 1987. Biogeography and Plate Tectonics. Elsevier Science Publishing Co., Inc., New York.
6. BROWN, W. M., E. M. PRAGER, A. WANG, and A. C. WILSON. 1982. Mitochondrial DNA sequences of primates: tempo and mode of evolution. J. Mol. Evol. 18:225-239.
7. BURGESS, G. H., and R. FRANZ. 1989. Zoogeography of the antillean freshwater fishes. Pp. 263-304 in C. A. WOODS, ed. Biogeography of the West Indies: past, present, and future. Sandhill Crane, Gainesville, Fla.
8. BUSSING, W. A. 1985. Patterns of distribution of the Central American Ichthyofauna. Pp. 453-473 in F G. STEHLI and S. D. WEBB, eds. The great American biotic interchange. Plenum Press, New York.
9. COSTA, W. J. E. M. 1990. Análise filogenética da família Rivulidae (Cyprinodontiformes, Aplocheiloidei). Rev. Brasil Biol. 50:65-82.
10. COSTA, W. J. E. M. 1991. Redescrição do gênero Rivulus, com notas sobre R. stellifer e R. compactas e a descrição de duas novas espécies do Brasil Central. Rev. Brasil. Biol. 51:327-333.
11. CRUZ, J. and A. M. DUBITSKY. 1976. Dos neuvos espécies de peces dulceacuicolos del gênero Rivulus Poey (Cyprinodontidae) de Cuba e Isla de Pinos. Poeyana 155:1-6.
12. DAVIS, W. P., D. S. TAYLOR, and B. J. TURNER. 1990. Field observations of the ecology and habits of mangrove rivulus (Rivulus marmoratus) in Beleize and Florida (Teleostei: Cyprinodontiformes: Rivulidae). Ichthol. Explor. Freshwaters 1:123-134.
13. DESALLE, R., T. FREEDMAN, E. M. PRAGER, and A. C. WILSON. 1987. Tempo and mode of sequence evolution in mitochondrial DNA of Hawaiian Drosophila. J. Mol. Evol. 26:157-164.
14. ESTES, R., and A. BAEZ. 1985. Herpetofauna of North and South America during the late Cretaceous and Cenozoic: evidence for interchange? Pp. 139-197 in F. G. STEHLI and S. D. WEBB, eds. The great American biotic interchange. Plenum Press, New York.
15. FARRIS, J. S. 1969. The retention index and the rescaled consistency index. Cladistics 5:417-419.
16. FELSENSTEIN, J. 1985. Confidence limits on phytogenies: an approach using the bootstrap. Evolution 39:783-791.
17. _. 1993. PHYLIP, version 3.5. University of Washington, Seattle.
18. GYLLENSTEIN, U. B., and H. A. ERLICH. 1988. Generation of single-stranded DNA by the polymerase chain reaction and its implications to direct sequencing of the HLA DQ-alpha locus. Proc. Natl. Acad. Sci. USA 85:7652-7656.
19. HASS, C. A., and S. B. HEDGES. 1991. Albumin evolution in West Indian frogs of the genus Eleutherodactylus (Leptodactylidae): Caribbean biogeography and a calibration of the albumin immunological clock. J. Zool. 225:413-426.
20. HASS, C. A., S. B. HEDGES, and L. R. MAXSON. 1993. Molecular insights into the relationships and biogeography of West Indian Anoline lizards. Biochem. Syst. Ecol. 21:97-114.
21. HEDGES, S. B. 1989. Evolution and biogeography of West Indian frogs of the genus Eleutherodactylus: slow-evolving loci and the major groups. Pp. 305-370 in C. A. WOODS, ed. The biogeography of the West Indies: past, present, and future. Sandhill Crane Press, Gainesville, Fla.
22. HEDGES, S. B. and R. L. BEZY. 1993. Phylogeny of Xantusiid lizards: concern for data and analysis. Mol. Phylogen. Evol. 2:76-87.
23. HEDGES, S. B., R. L. BEZY, and L. R. MAXSON. 1991. Phylogenetic relationships and biogeography of Xantusiid lizards, inferred from mitochondrial DNA sequences. Mol. Biol. Evol. 8:767-780.
24. HEDGES, S. B., C. A. HASS, and L. R. MAXSON. 1992. Caribbean biogeography: molecular evidence for dispersal in West Indian terrestrial vertebrates. Proc. Natl. Acad. Sci. USA 89:1909-1913.
25. HENDERSON, R. W, and S. B. HEDGES. 1995. Origin of West Indian populations of the geographically widespread boa Corallus enydrus inferred from mitochondrial DNA sequences. Mol. Phylogenet. Evol. 4:88-92.
26. HIGGINS, D. G., A. J. BLEASBY, and R. FUCHS. 1992. CLUSTAL V: improved software for multiple sequence alignment. Comput. Appl. Biosci. 8:189-191.
27. HILLIS, D. M., J. P. HUELSENBECK, and C. W. CUNNINGHAM. 1994. Application and accuracy of molecular phylogenies. Science 264:671-677.
28. HUBER, J. H. 1992. Review of Rivulus: Ecobiogeography - relationships. Societe Française d'Ichtyologie, Paris.
29. IRWIN, D. M., T. D. KOCHER, and A. C. WILSON. 1991. Evolution of the cytochrome b gene in mammals. J. Mol. Evol. 32:128-144.
30. JONES, C. S., H. TEGELSTROM, D. S. LATCHMAN, and R. J. BERRY. 1988. An improved rapid method for mitochondrial DNA isolation suitable for use in the study of closely related populations. Bioc. Gen. 26:83-88.
31. KIMURA, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
32. KOCHER, T. D., W. K. THOMAS, A. MEYER, S. V. EDWARDS, S. PAABO, F. X. VILLABLANCA, and A. C. WILSON. 1989. Dynamics of mitochondrial DNA evolution in animals: amplification and sequenceing with conserved primers. Proc. Natl. Acad. Sci. USA 86:6196-6200.
33. LYDEARD, C., M. C. WOOTEN, and A. MEYER. 1995a. Cytochrome b sequence variation and a molecular phylogeny of the livebeanng fish genus Gambusia (Cyprinodontiformes: Poeciliidae). Can. J. Zool. 73:213-227.
34. _. 1995b. Molecules, morphology, and area cladograms: a cladistic and biogeographic analysis of Gambusia (Teleostei: Poeciliidae). Syst. Biol. 44:221-236.
35. MARSHALL, L. G. and T. SEMPERE. 1993. Evolution of the Neotropical Cenozoic land mammal fauna in its geochronologic, stratigraphic, and tectonic context. Pp. 329-392 in P. GOLDBLATT, ed. Biological relationships between Africa and South America. Yale University Press, New Haven, Conn.
36. MEYER, A., T. D. KOCHER, P. BASASIBWAKI, and A. C. WILSON. 1990. Monophyletic origin of Lake Victorian cichlid fishes suggested by mitochondrial DNA sequences. Nature 347:550-553.
37. MEYER, A., and C. LYDEARD. 1993. The evolution of copulatory organs, internal fertilization, placentae, and viviparity in killifishes (Cyprinodontiformes) inferred from a DNA phylogeny of the tyrosine kinase gene X-src. Proc. R. Soc. Lond. B 254:153-162.
38. MEYER, A., and A. C. WILSON. 1990. Origin of tetrapods inferred from their mitochondrial DNA affiliation to lungfish. J. Mol. Evol. 31:359-364.
39. MEYER, A., J. M. MORRISEY, and M. SCHARTL. 1994. Recurrent origin of a sexually selected trait in Xiphophorus fishes inferred from a molecular phylogeny. Nature 368:539-542.
40. MISHLER, B. D., M. J. DONOGHUE, and V. A. ALBERT. 1991. The decay index as a measure of relative robustness within a cladogram (abstract). Willi Hennig Society Meeting, Toronto, Ontario.
41. MIYAMOTO, M. M., and S. M. BOYLE. 1989. The potential importance of mitochondrial DNA sequence data to eutherian mammal phylogeny. Pp. 437-450 in B. FERNHOLM, K. BREMER, and H. JORNVALL, eds. The hierarchy of life. Elsevier Science, Amsterdam.
42. NORMARK, B. B., A. R. MCCUNE, and R. G. HARRISON. 1991. Phylogenetic relationships of Neopterygian fishes, inferred from mitochondrial DNA sequences. Mol. Biol. Evol. 8:819-834.
43. PARENTI, L. R. 1981. A phylogenetic analysis of Cyprinodontiform fishes (Teleostei: Atherinomorpha). Bull. Am. Mus. Nat. Hist. 168:335-557.
44. PARKER, A., and I. KORNFIELD. 1995. Molecular perspective on evolution and zoogeography of cyprinodontid killifishes (Teleostei, Atherinomorpha). Copeia 1995:8-21.
45. PINDELL, J. L., and S. F. BARRETT. 1990. Geological evolution of the Caribbean: a plate tectonic perspective. Pp. 405-432 in J. E. CASE and G. DENGO, eds. The geology of North America. Vol. H, The Caribbean region. Geological Society of America, Boulder, Colo.
46. PINDELL, J. L., S. C. CANDE, W. C. PITMAN III, D. B. ROWLEY, J. F. DEWEY, J. LABRECQUE, and W. HAXBY. 1988. A platekinematic framework for models of Caribbean evolution. Tectonophysics 155:121-138.
47. PITMAN, W. C. III, S. CANDE, J. LABRECQUE, and J. PINDELL. 1993. Fragmentation of Gondwana: the separation of Africa from South America. Pp. 15-34 in P. GOLDBLATT, ed. Biological relationships between Africa and South America. Yale University Press, New Haven, Conn.
48. ROSEN, D. E. 1976. A vicariance model of Caribbean biogeography. Syst. Zool. 27:431-464.
49. _. 1985. Geological hierarchies and biogeographical congruence in the Caribbean. Ann. Miss. Bot. Gar. 72:636-659.
50. Ross, M. I., and C. R. SCOTESE. 1988. A hierarchal tectonic model of the Gulf of Mexico and Caribbean region. Tectonophysics 155:139-168.
51. SAIKI, R. K., D. H. GELFAND, S. STOFFEL, S. J. SCHARF, R. HIGUCHI, G. T. HORN, K. B. MULLIS, and H. A. ERLICH. 1988. Primer-directed enzymatic amplification of DNA with a thermostable polymerase. Science 239:487-491.
52. SAITOU, N., and M. NEI. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
53. SANGER, F., S. NICKLEN, and A. R. COULSON. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
54. SCHEEL, J. J. 1968. Rivulins of the Old World. T. F. H. Publications, Inc., Neptune City, N.J.
55. _. 1972. Rivuline karyotypes and their evolution (Rivulinae, Cyprinodontidae, Pisces). Z. Zool. Systm. & Evol. Forsch. 10:180-209.
56. _. 1990. Atlas of killitishes of the Old World. T. F. H. Publications, Inc., Neptune City, N.J.
57. STURMBAUER, C., and A. MEYER. 1992. Genetic divergence, speciation and morphological stasis in a lineage of African cichlid fishes. Nature 358:578-581.
58. SWOFFORD, D. L. 1993. PAUP-Phylogenetic analysis using parsimony, vers. 3.1.1. Illinois Natural History Survey, Champaign.
59. TAJIMA, F. 1993. Simple methods tor testing the molecular evolutionary clock hypothesis. Genetics 135:599-607.
60. THOMAS, W. K. and A. T. BECKENBACH. 1989. Variation in Salmonid mitochondrial DNA: evolutionary constraints and mechanisms of substitution. J. Mol. Evol. 29:233-245.
61. WEBB, S. D. 1985. Main pathways of mammalian diversification in North America. Pp. 201-217 in F. G. STEHLI and S. D. WEBB, eds. The great American biotic interchange. Plenum Press, New York.
62. WOURMS, J. P. 1972a. Developmental biology of annual fishes. I. Stages in the normal development of Austrofundulus myersi Dahl. J. Exp. Zool. 182:143-168.
63. _. 1972b. Developmental biology of annual fishes. II. Naturally occurring dispersion-reaggregation of blastomeres during development of annual fish eggs. J. Exp. Zool. 182:169-200.
64. _. 1972c. Developmental biology of annual fishes. III. Pre-embryonic and embryonic diapause of variable duration in the eggs of annual fishes. J. Exp. Zool. 182:389-414.
65. ZHU, D., B. G. M. JAMIESON, A. HUGALL, and C. MORITZ. 1994. Sequence evolution and phylogenetic signal in control-region and cytochrome b sequences of Rainbow fishes (Melanotaeniidae). Mol. Biol. Evol. 11:672-683.