메뉴 건너뛰기




Volumn 26, Issue 3, 2009, Pages 163-178

Prokaryotic populations and activities in an interbedded coal deposit, including a previously deeply buried section (1.6-2.3 km) above ∼150 Ma basement rock

Author keywords

Bacterial activity; Biogeochemistry; Deep biosphere; Prokaryote diversity; Terrestrial subsurface

Indexed keywords

BASEMENT ROCK; BIOGEOCHEMISTRY; BURIAL (GEOLOGY); DEPOSITIONAL ENVIRONMENT; EOCENE-OLIGOCENE BOUNDARY; GEOMICROBIOLOGY; LIGNITE; METASEDIMENTARY ROCK; MICROBIAL ACTIVITY; MIOCENE; PLEISTOCENE; PROKARYOTE; WEATHERING;

EID: 62249172960     PISSN: 01490451     EISSN: 15210529     Source Type: Journal    
DOI: 10.1080/01490450902724832     Document Type: Article
Times cited : (86)

References (82)
  • 1
    • 34248191668 scopus 로고    scopus 로고
    • The microbial community structure in petroleum-contaminated sediments corresponds to geophysical signatures
    • Allen, J. P., Atekwana, E. A., Atekwana, E. A., Duris, J. W., Werkema, D. D. and Rossbach, S. (2007) The microbial community structure in petroleum-contaminated sediments corresponds to geophysical signatures. Appl Environ Microbiol, 73, pp. 2860-2870.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 2860-2870
    • Allen, J.P.1    Atekwana, E.A.2    Atekwana, E.A.3    Duris, J.W.4    Werkema, D.D.5    Rossbach, S.6
  • 2
    • 33748799671 scopus 로고    scopus 로고
    • New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras
    • Ashelford, K. E., Chuzhanova, N. A., Fry, J. C., Jones, A. J. and Weightman, A. J. (2006) New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras. Appl Environ Microbiol, 72, pp. 5734-5741.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 5734-5741
    • Ashelford, K.E.1    Chuzhanova, N.A.2    Fry, J.C.3    Jones, A.J.4    Weightman, A.J.5
  • 3
    • 0000411498 scopus 로고
    • Vertical and horizontal variations in the physiological diversity of the aerobic chemoheterotrophic bacterial microflora in deep southeast coastal-plain subsurface Sediments
    • Balkwill, D. L., Fredrickson, J. K. and Thomas, J. M. (1989) Vertical and horizontal variations in the physiological diversity of the aerobic chemoheterotrophic bacterial microflora in deep southeast coastal-plain subsurface Sediments. Appl Environ Microbiol, 55, pp. 1058-1065.
    • (1989) Appl Environ Microbiol , vol.55 , pp. 1058-1065
    • Balkwill, D.L.1    Fredrickson, J.K.2    Thomas, J.M.3
  • 4
    • 0032963409 scopus 로고    scopus 로고
    • Wide distribution and diversity of members of the bacterial kingdom Acidobacterium in the environment
    • Barns, S. M., Takala, S. L. and Kuske, C. R. (1999) Wide distribution and diversity of members of the bacterial kingdom Acidobacterium in the environment. Appl Environ Microbiol, 65, pp. 1731-1737.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 1731-1737
    • Barns, S.M.1    Takala, S.L.2    Kuske, C.R.3
  • 5
    • 34547513507 scopus 로고    scopus 로고
    • Phylogenetic and physiological diversity of cultured deep-biosphere bacteria from equatorial Pacific Ocean and Peru Margin sediments
    • Batzke, A., Engelen, B., Sass, H. and Cypionka, H. (2007) Phylogenetic and physiological diversity of cultured deep-biosphere bacteria from equatorial Pacific Ocean and Peru Margin sediments. Geomicrobiol J, 24, pp. 261-273.
    • (2007) Geomicrobiol J , vol.24 , pp. 261-273
    • Batzke, A.1    Engelen, B.2    Sass, H.3    Cypionka, H.4
  • 7
    • 0032798291 scopus 로고    scopus 로고
    • Localized sulfate-reducing zones in a coastal plain aquifer
    • Brown, C. J., Coates, J. D. and Schoonen, M AA (1999) Localized sulfate-reducing zones in a coastal plain aquifer. Ground Water, 37, pp. 505-516.
    • (1999) Ground Water , vol.37 , pp. 505-516
    • Brown, C.J.1    Coates, J.D.2    Schoonen, M.A.A.3
  • 8
    • 33646827488 scopus 로고    scopus 로고
    • The versatile epsilon-proteobacteria: Key players in sulphidic habitats
    • Campbell, B. J., Engel, A. S., Porter, M. L. and Takai, K. (2006) The versatile epsilon-proteobacteria: Key players in sulphidic habitats. Nat Rev Microbiol, 4, pp. 458-468.
    • (2006) Nat Rev Microbiol , vol.4 , pp. 458-468
    • Campbell, B.J.1    Engel, A.S.2    Porter, M.L.3    Takai, K.4
  • 9
    • 0030738777 scopus 로고    scopus 로고
    • A molecular comparison of culturable aerobic heterotrophic bacteria and 16S rDNA clones derived from a deep subsurface sediment
    • Chandler, D. P., Li, S. M., Spadoni, C. M., Drake, G. R., Balkwill, D. L., Fredrickson, J. K. and Brockman, F. J. (1997) A molecular comparison of culturable aerobic heterotrophic bacteria and 16S rDNA clones derived from a deep subsurface sediment. FEMS Microbiol Ecol, 23, pp. 131-144.
    • (1997) FEMS Microbiol Ecol , vol.23 , pp. 131-144
    • Chandler, D.P.1    Li, S.M.2    Spadoni, C.M.3    Drake, G.R.4    Balkwill, D.L.5    Fredrickson, J.K.6    Brockman, F.J.7
  • 12
    • 19944399720 scopus 로고    scopus 로고
    • Distributions of microbial activities in deep subseafloor sediments
    • D'Hondt, S., Jorgensen, B. B., Miller, D. J., Batzke, A., Blake, R. Cragg, B. A. et al. (2004) Distributions of microbial activities in deep subseafloor sediments. Science, 306, pp. 2216-2221.
    • (2004) Science , vol.306 , pp. 2216-2221
    • D'Hondt, S.1    Jorgensen, B.B.2    Miller, D.J.3    Batzke, A.4    Blake, R.5    Cragg, B.A.6
  • 13
    • 0035208368 scopus 로고    scopus 로고
    • Sulfate reduction at a lignite seam: Microbial abundance and activity
    • Detmers, J., Schulte, U., Strauss, H. and Kuever, J. (2001) Sulfate reduction at a lignite seam: Microbial abundance and activity. Micro Ecol, 42, pp. 238-247.
    • (2001) Micro Ecol , vol.42 , pp. 238-247
    • Detmers, J.1    Schulte, U.2    Strauss, H.3    Kuever, J.4
  • 15
    • 33845869861 scopus 로고    scopus 로고
    • Significance of microbial activity in Australian coal bed methane reservoirs-a review
    • Faiz, M. and Hendry, P. (2006) Significance of microbial activity in Australian coal bed methane reservoirs-a review. Bull Can Petrol Geol, 54, pp. 261-272.
    • (2006) Bull Can Petrol Geol , vol.54 , pp. 261-272
    • Faiz, M.1    Hendry, P.2
  • 16
    • 0032818698 scopus 로고    scopus 로고
    • Biotechnology and microbiology of coal degradation
    • Fakoussa, R. M. and Hofrichter, M. (1999) Biotechnology and microbiology of coal degradation. Appl Microbiol Biotechnol, 52, pp. 25-40.
    • (1999) Appl Microbiol Biotechnol , vol.52 , pp. 25-40
    • Fakoussa, R.M.1    Hofrichter, M.2
  • 17
    • 85023819181 scopus 로고    scopus 로고
    • Geomicrobial processes and biodiversity in the deep terrestrial subsurface
    • Fredrickson, J. K. and Balkwill, D. L. (2006) Geomicrobial processes and biodiversity in the deep terrestrial subsurface. Geomicrobiol J, 23, pp. 345-356.
    • (2006) Geomicrobiol J , vol.23 , pp. 345-356
    • Fredrickson, J.K.1    Balkwill, D.L.2
  • 18
    • 0028956922 scopus 로고
    • Time-dependent changes in viable numbers and activities of aerobic heterotrophic bacteria in subsurface samples
    • Fredrickson, J. K., Li, S. W., Brockman, F. J., Haldeman, D. L., Amy, P. S. and Balkwill, D. L. (1995) Time-dependent changes in viable numbers and activities of aerobic heterotrophic bacteria in subsurface samples. J Microbiol Meth, 21, pp. 253-265.
    • (1995) J Microbiol Meth , vol.21 , pp. 253-265
    • Fredrickson, J.K.1    Li, S.W.2    Brockman, F.J.3    Haldeman, D.L.4    Amy, P.S.5    Balkwill, D.L.6
  • 19
    • 0025919183 scopus 로고
    • Physiological diversity and distributions of heterotrophic bacteria in deep cretaceous sediments of the Atlantic coastal-plain
    • Fredrickson, J. K., Balkwill, D. L., Zachara, J. M., Li, S MW, Brockman, F. J. and Simmons, M. A. (1991) Physiological diversity and distributions of heterotrophic bacteria in deep cretaceous sediments of the Atlantic coastal-plain. Appl Environ Microbiol, 57, pp. 402-411.
    • (1991) Appl Environ Microbiol , vol.57 , pp. 402-411
    • Fredrickson, J.K.1    Balkwill, D.L.2    Zachara, J.M.3    Li, S.M.W.4    Brockman, F.J.5    Simmons, M.A.6
  • 20
    • 0031464958 scopus 로고    scopus 로고
    • Pore-size constraints on the activity and survival of subsurface bacteria in a late Cretaceous shale-sandstone sequence, northwestern New Mexico
    • Fredrickson, J. K., McKinley, J. P., Bjornstad, B. N., Long, P. E., Ringelberg, D. B. White, D. C. et al. (1997) Pore-size constraints on the activity and survival of subsurface bacteria in a late Cretaceous shale-sandstone sequence, northwestern New Mexico. Geomicrobiol J, 14, pp. 183-202.
    • (1997) Geomicrobiol J , vol.14 , pp. 183-202
    • Fredrickson, J.K.1    McKinley, J.P.2    Bjornstad, B.N.3    Long, P.E.4    Ringelberg, D.B.5    White, D.C.6
  • 21
    • 77956838067 scopus 로고
    • Direct methods and biomass estimation
    • Fry, J. C. (1990) Direct methods and biomass estimation. Meth Microbiol, 22, pp. 41-85.
    • (1990) Meth Microbiol , vol.22 , pp. 41-85
    • Fry, J.C.1
  • 22
    • 33748491732 scopus 로고    scopus 로고
    • Analysis of DGGE profiles to explore the relationship between prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin
    • Fry, J. C., Webster, G., Cragg, B. A., Weightman, A. J. and Parkes, R. J. (2006) Analysis of DGGE profiles to explore the relationship between prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin. FEMS Microbiol Ecol, 58, pp. 86-98.
    • (2006) FEMS Microbiol Ecol , vol.58 , pp. 86-98
    • Fry, J.C.1    Webster, G.2    Cragg, B.A.3    Weightman, A.J.4    Parkes, R.J.5
  • 23
    • 53749085723 scopus 로고    scopus 로고
    • The distribution of microbail taxa in the subsurface water of the Kalahari Shield, South Africa
    • Gihring, T. M., Moser, D. P., Lin, L. H., Davidson, M., Onstott, T. C. Morgan, L. et al. (2006) The distribution of microbail taxa in the subsurface water of the Kalahari Shield, South Africa. Geomicrobiol J, 23, pp. 415-430.
    • (2006) Geomicrobiol J , vol.23 , pp. 415-430
    • Gihring, T.M.1    Moser, D.P.2    Lin, L.H.3    Davidson, M.4    Onstott, T.C.5    Morgan, L.6
  • 24
    • 0000262823 scopus 로고    scopus 로고
    • Evolution, diversity, and molecular ecology of marine prokaryotes
    • Wiley, New York
    • Giovannoni, S. J. and Rappe, M. S. (2000) Evolution, diversity, and molecular ecology of marine prokaryotes. Microbial Ecology of the Oceans, pp. 47-84. Wiley, New York
    • (2000) Microbial Ecology of the Oceans , pp. 47-84
    • Giovannoni, S.J.1    Rappe, M.S.2
  • 25
    • 18144401354 scopus 로고    scopus 로고
    • Research paper: Microbial survival - The paleome: A sedimentary genetic record of past microbial communities
    • Inagaki, F., Okada, H., Tsapin, A. I. and Nealson, K. H. (2005) Research paper: Microbial survival - The paleome: A sedimentary genetic record of past microbial communities. Astrobiology, 5, pp. 141-153.
    • (2005) Astrobiology , vol.5 , pp. 141-153
    • Inagaki, F.1    Okada, H.2    Tsapin, A.I.3    Nealson, K.H.4
  • 26
    • 2142857748 scopus 로고    scopus 로고
    • Microbial communities associated with geological horizons in coastal subseafloor sediments from the Sea of Okhotsk
    • Inagaki, F., Suzuki, M., Takai, K., Oida, H., Sakamoto, T. Aoki, K. et al. (2003) Microbial communities associated with geological horizons in coastal subseafloor sediments from the Sea of Okhotsk. Appl Environ Microbiol, 69, pp. 7224-7235.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 7224-7235
    • Inagaki, F.1    Suzuki, M.2    Takai, K.3    Oida, H.4    Sakamoto, T.5    Aoki, K.6
  • 27
    • 33644505436 scopus 로고    scopus 로고
    • Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments, on the Pacific Ocean Margin
    • Inagaki, F., Nunoura, T., Nakagawa, S., Teske, A., Lever, M. Lauer, A. et al. (2006) Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments, on the Pacific Ocean Margin. Proc Natl Acad Sci USA, 103, pp. 2815-2820.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 2815-2820
    • Inagaki, F.1    Nunoura, T.2    Nakagawa, S.3    Teske, A.4    Lever, M.5    Lauer, A.6
  • 28
    • 25144525184 scopus 로고    scopus 로고
    • Isolation and characterization of Sulfurospirillum carboxydovorans sp nov., a new microaerophilic carbon monoxide oxidizing epsilon Proteobacterium
    • Jensen, A. and Finster, K. (2005) Isolation and characterization of Sulfurospirillum carboxydovorans sp nov., a new microaerophilic carbon monoxide oxidizing epsilon Proteobacterium. Anto Van Leeuwenhoek Inter J Gen Mol Microbiol, 87, pp. 339-353.
    • (2005) Anto Van Leeuwenhoek Inter J Gen Mol Microbiol , vol.87 , pp. 339-353
    • Jensen, A.1    Finster, K.2
  • 29
    • 48049105163 scopus 로고    scopus 로고
    • Techniques for contamination assessment during drilling for terrestrial subsurface sediments
    • Kallmeyer, J., Mangelsdorf, K., Cragg, B. and Horsfield, B. (2006) Techniques for contamination assessment during drilling for terrestrial subsurface sediments. Geomicrobiol J, 23, pp. 227-239.
    • (2006) Geomicrobiol J , vol.23 , pp. 227-239
    • Kallmeyer, J.1    Mangelsdorf, K.2    Cragg, B.3    Horsfield, B.4
  • 30
    • 14644396355 scopus 로고    scopus 로고
    • A cold chromium distillation procedure for radiolabeled sulfide applied to sulfate reduction measurements
    • Kallmeyer, J., Ferdelman, T. G., Weber, A., Fossing, H. and Jorgensen, B. B. (2004) A cold chromium distillation procedure for radiolabeled sulfide applied to sulfate reduction measurements. Limnol Oceanog Meth, 2, pp. 171-180.
    • (2004) Limnol Oceanog Meth , vol.2 , pp. 171-180
    • Kallmeyer, J.1    Ferdelman, T.G.2    Weber, A.3    Fossing, H.4    Jorgensen, B.B.5
  • 31
    • 0028982333 scopus 로고
    • Microbiological comparisons within and across contiguous lacustrine, paleosol, and fluvial subsurface sediments
    • Kieft, T. L., Fredrickson, J. K., McKinley, J. P., Bjornstad, B. N., Rawson, S. A. Phelps, T. J. et al. (1995) Microbiological comparisons within and across contiguous lacustrine, paleosol, and fluvial subsurface sediments. Appl Environ Microbiol, 61, pp. 749-757.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 749-757
    • Kieft, T.L.1    Fredrickson, J.K.2    McKinley, J.P.3    Bjornstad, B.N.4    Rawson, S.A.5    Phelps, T.J.6
  • 32
    • 0242573334 scopus 로고    scopus 로고
    • Diversity and abundance of uncultured Cytophaga-like bacteria in the Delaware Estuary
    • Kirchman, D. L., Yu, L. and Cottrell, M. T. (2003) Diversity and abundance of uncultured Cytophaga-like bacteria in the Delaware Estuary. Appl Environ Microbiol, 69, pp. 6587-6596.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 6587-6596
    • Kirchman, D.L.1    Yu, L.2    Cottrell, M.T.3
  • 33
  • 34
    • 0038107871 scopus 로고    scopus 로고
    • Molecular analysis of deep subsurface microbial communities in Nankai Trough sediments (ODP Leg 190, Site 1176)
    • Kormas, K. A., Smith, D. C., Edgcomb, V. and Teske, A. (2003) Molecular analysis of deep subsurface microbial communities in Nankai Trough sediments (ODP Leg 190, Site 1176). FEMS Microbiol Ecol, 45, pp. 115-125.
    • (2003) FEMS Microbiol Ecol , vol.45 , pp. 115-125
    • Kormas, K.A.1    Smith, D.C.2    Edgcomb, V.3    Teske, A.4
  • 35
    • 33644954983 scopus 로고    scopus 로고
    • Molecular analysis of deep subsurface Cretaceous rock indicates abundant Fe(III)- and S-O-reducing bacteria in a sulfate-rich environment
    • Kovacik, W. P., Takai, K., Mormile, M. R., McKinley, J. P., Brockman, F. J., Fredrickson, J. K. and Holben, W. E. (2006) Molecular analysis of deep subsurface Cretaceous rock indicates abundant Fe(III)- and S-O-reducing bacteria in a sulfate-rich environment. Environ Microbiol, 8, pp. 141-155.
    • (2006) Environ Microbiol , vol.8 , pp. 141-155
    • Kovacik, W.P.1    Takai, K.2    Mormile, M.R.3    McKinley, J.P.4    Brockman, F.J.5    Fredrickson, J.K.6    Holben, W.E.7
  • 37
    • 0036876847 scopus 로고    scopus 로고
    • Anaerobic microbial growth from components of cretaceous shales
    • Krumholz, L. R., Harris, S. H. and Suflita, J. M. (2002) Anaerobic microbial growth from components of cretaceous shales. Geomicrobiol J, 19, pp. 593-602.
    • (2002) Geomicrobiol J , vol.19 , pp. 593-602
    • Krumholz, L.R.1    Harris, S.H.2    Suflita, J.M.3
  • 38
    • 0030620638 scopus 로고    scopus 로고
    • Confined subsurface microbial communities in Cretaceous rock
    • Krumholz, L. R., McKinley, J. P., Ulrich, F. A. and Suflita, J. M. (1997) Confined subsurface microbial communities in Cretaceous rock. Nature, 386, pp. 64-66.
    • (1997) Nature , vol.386 , pp. 64-66
    • Krumholz, L.R.1    McKinley, J.P.2    Ulrich, F.A.3    Suflita, J.M.4
  • 39
    • 29144494967 scopus 로고    scopus 로고
    • Microbial diversity in coastal subsurface sediments: A cultivation approach using various electron acceptors and substrate gradients
    • Kopke, B., Wilms, R., Engelen, B., Cypionka, H. and Sass, H. (2005) Microbial diversity in coastal subsurface sediments: A cultivation approach using various electron acceptors and substrate gradients. Appl Environ Microbiol, 71, pp. 7819-7830.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 7819-7830
    • Kopke, B.1    Wilms, R.2    Engelen, B.3    Cypionka, H.4    Sass, H.5
  • 40
    • 0031271897 scopus 로고    scopus 로고
    • Study of the mechanisms by which microorganisms solubilize and/or liquefy Spanish coals
    • Laborda, F., Fernandez, M., Luna, N. and Monistrol, I. F. (1997) Study of the mechanisms by which microorganisms solubilize and/or liquefy Spanish coals. Fuel Process Technol, 52, pp. 95-107.
    • (1997) Fuel Process Technol , vol.52 , pp. 95-107
    • Laborda, F.1    Fernandez, M.2    Luna, N.3    Monistrol, I.F.4
  • 41
    • 33947239403 scopus 로고    scopus 로고
    • Molecular phylogenetic diversity of the microbial community associated with a high-temperature petroleum reservoir at an offshore oilfield
    • Li, H., Yang, S. -Z., Mu, B. -Z., Rong, Z. -F. and Zhang, J. (2007) Molecular phylogenetic diversity of the microbial community associated with a high-temperature petroleum reservoir at an offshore oilfield. FEMS Microbiol Ecol, 60, pp. 74-84.
    • (2007) FEMS Microbiol Ecol , vol.60 , pp. 74-84
    • Li, H.1    Yang, S.-Z.2    Mu, B.-Z.3    Rong, Z.-F.4    Zhang, J.5
  • 42
    • 33750332574 scopus 로고    scopus 로고
    • Long-term sustainability of a high-energy, low-diversity crustal biome
    • Lin, L. H., Wang, P. L., Rumble, D., Lippmann-Pipke, J., Boice, E. Pratt, L. M. et al. (2006) Long-term sustainability of a high-energy, low-diversity crustal biome. Science, 314, pp. 479-482.
    • (2006) Science , vol.314 , pp. 479-482
    • Lin, L.H.1    Wang, P.L.2    Rumble, D.3    Lippmann-Pipke, J.4    Boice, E.5    Pratt, L.M.6
  • 43
    • 50049107012 scopus 로고    scopus 로고
    • Significant contribution of Archaea to extant biomass in marine subsurface sediments
    • Lipp, J. S., Morono, Y., Inagaki, F. and Hinrichs, K. U. (2008) Significant contribution of Archaea to extant biomass in marine subsurface sediments. Nature, 454, pp. 991-994.
    • (2008) Nature , vol.454 , pp. 991-994
    • Lipp, J.S.1    Morono, Y.2    Inagaki, F.3    Hinrichs, K.U.4
  • 44
    • 27144526424 scopus 로고    scopus 로고
    • A quantitative assessment of pressure dependent adaptive changes in the membrane lipids of piezosensitive deep sub-seafloor bacterium
    • Mangelsdorf, K., Zink, K. G., Birrien, J. L. and Toffin, L. (2005) A quantitative assessment of pressure dependent adaptive changes in the membrane lipids of piezosensitive deep sub-seafloor bacterium. Organ Geochem, 36, pp. 1459-1479.
    • (2005) Organ Geochem , vol.36 , pp. 1459-1479
    • Mangelsdorf, K.1    Zink, K.G.2    Birrien, J.L.3    Toffin, L.4
  • 45
    • 0034535113 scopus 로고    scopus 로고
    • Methanogen and bacterial diversity and distribution in deep gas hydrate sediments from the Cascadia Margin as revealed by 16S rRNA molecular analysis
    • Marchesi, J. R., Weightman, A. J., Cragg, B. A., Parkes, R. J. and Fry, J. C. (2001) Methanogen and bacterial diversity and distribution in deep gas hydrate sediments from the Cascadia Margin as revealed by 16S rRNA molecular analysis. FEMS Microbiol Ecol, 34, pp. 221-228.
    • (2001) FEMS Microbiol Ecol , vol.34 , pp. 221-228
    • Marchesi, J.R.1    Weightman, A.J.2    Cragg, B.A.3    Parkes, R.J.4    Fry, J.C.5
  • 46
    • 33644854313 scopus 로고    scopus 로고
    • Sensitive determination of microbial growth by nucleic acid staining in aqueous suspension
    • Martens-Habbena, W. and Sass, H. (2006) Sensitive determination of microbial growth by nucleic acid staining in aqueous suspension. Appl Environ Microbiol, 72, pp. 87-95.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 87-95
    • Martens-Habbena, W.1    Sass, H.2
  • 48
    • 0032916067 scopus 로고    scopus 로고
    • Molecular analysis of bacterial community structure and diversity in unimproved and improved upland grass pastures
    • McCaig, A. E., Glover, L. A. and Prosser, J. I. (1999) Molecular analysis of bacterial community structure and diversity in unimproved and improved upland grass pastures. Appl Environ Microbiol, 65, pp. 1721-1730.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 1721-1730
    • McCaig, A.E.1    Glover, L.A.2    Prosser, J.I.3
  • 49
    • 0347723719 scopus 로고    scopus 로고
    • Temporal shifts in the geochemistry and microbial community structure of an ultradeep mine borehole following isolation
    • Moser, D. P., Onstott, T. C., Fredrickson, J. K., Brockman, F. J., Balkwill, D. L. Drake, G. R. et al. (2003) Temporal shifts in the geochemistry and microbial community structure of an ultradeep mine borehole following isolation. Geomicrobiol J, 20, pp. 517-548.
    • (2003) Geomicrobiol J , vol.20 , pp. 517-548
    • Moser, D.P.1    Onstott, T.C.2    Fredrickson, J.K.3    Brockman, F.J.4    Balkwill, D.L.5    Drake, G.R.6
  • 50
    • 0024198391 scopus 로고
    • Burial-dominated cementation in non-tropical carbonates of the oligocene Te-Kuiti-Group, New-Zealand
    • Nelson, C. S., Harris, G. J. and Young, H. R. (1988) Burial-dominated cementation in non-tropical carbonates of the oligocene Te-Kuiti-Group, New-Zealand. Sediment Geol, 60, pp. 233-250.
    • (1988) Sediment Geol , vol.60 , pp. 233-250
    • Nelson, C.S.1    Harris, G.J.2    Young, H.R.3
  • 51
    • 0024190795 scopus 로고
    • Subsurface stratigraphy, paleoenvironments, palynology, and depositional history of the Late Neogene Tauranga Group at Ohinewai, Lower Waikato Lowland, South-Auckland, New-Zealand
    • Nelson, C. S., Mildenhall, D. C., Todd, A. J. and Pocknall, D. T. (1988) Subsurface stratigraphy, paleoenvironments, palynology, and depositional history of the Late Neogene Tauranga Group at Ohinewai, Lower Waikato Lowland, South-Auckland, New-Zealand. New Zeal J Geol Geophys, 31, pp. 21-40.
    • (1988) New Zeal J Geol Geophys , vol.31 , pp. 21-40
    • Nelson, C.S.1    Mildenhall, D.C.2    Todd, A.J.3    Pocknall, D.T.4
  • 52
    • 1342289953 scopus 로고    scopus 로고
    • Diversity of prokaryotes and methanogenesis in deep subsurface sediments from the Nankai Trough, Ocean Drilling Program Leg 190
    • Newberry, C. J., Webster, G., Cragg, B. A., Parkes, R. J., Weightman, A. J. and Fry, J. C. (2004) Diversity of prokaryotes and methanogenesis in deep subsurface sediments from the Nankai Trough, Ocean Drilling Program Leg 190. Environ Microbiol, 6, pp. 274-287.
    • (2004) Environ Microbiol , vol.6 , pp. 274-287
    • Newberry, C.J.1    Webster, G.2    Cragg, B.A.3    Parkes, R.J.4    Weightman, A.J.5    Fry, J.C.6
  • 54
    • 0035317030 scopus 로고    scopus 로고
    • Comparative analysis of methane-oxidizing archaea and sulfate-reducing bacteria in anoxic marine sediments
    • Orphan, V. J., Hinrichs, K. U., Ussier, W., Paull, C. K., Taylor, L. T. Sylva, S. P. et al. (2001) Comparative analysis of methane-oxidizing archaea and sulfate-reducing bacteria in anoxic marine sediments. Appl Environ Microbiol, 67, pp. 1922-1934.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 1922-1934
    • Orphan, V.J.1    Hinrichs, K.U.2    Ussier, W.3    Paull, C.K.4    Taylor, L.T.5    Sylva, S.P.6
  • 55
    • 0347794946 scopus 로고    scopus 로고
    • Recent studies on bacterial populations and processes in subseafloor sediments: A review
    • Parkes, R. J., Cragg, B. A. and Wellsbury, P. (2000) Recent studies on bacterial populations and processes in subseafloor sediments: A review. Hydrogeol J, 8, pp. 11-28.
    • (2000) Hydrogeol J , vol.8 , pp. 11-28
    • Parkes, R.J.1    Cragg, B.A.2    Wellsbury, P.3
  • 57
    • 0029161663 scopus 로고
    • A combined ecological and physiological approach to studying sulfate reduction within deep marine sediment layers
    • Parkes, R. J., Cragg, B. A., Bale, S. J., Goodman, K. and Fry, J. C. (1995) A combined ecological and physiological approach to studying sulfate reduction within deep marine sediment layers. J Microbiol Meth, 23, pp. 235-249.
    • (1995) J Microbiol Meth , vol.23 , pp. 235-249
    • Parkes, R.J.1    Cragg, B.A.2    Bale, S.J.3    Goodman, K.4    Fry, J.C.5
  • 59
  • 60
    • 0030875389 scopus 로고    scopus 로고
    • Microbial life in deep granitic rock
    • Pedersen, K. (1997) Microbial life in deep granitic rock. FEMS Microbiol Rev, 20, pp. 399-414.
    • (1997) FEMS Microbiol Rev , vol.20 , pp. 399-414
    • Pedersen, K.1
  • 61
    • 0029973821 scopus 로고    scopus 로고
    • 16S rRNA gene diversity of attached and unattached bacteria in boreholes along the access tunnel to the Aspo hard rock laboratory, Sweden
    • Pedersen, K., Arlinger, J., Ekendahl, S. and Hallbeck, L. (1996) 16S rRNA gene diversity of attached and unattached bacteria in boreholes along the access tunnel to the Aspo hard rock laboratory, Sweden. FEMS Microbiol Ecol, 19, pp. 249-262.
    • (1996) FEMS Microbiol Ecol , vol.19 , pp. 249-262
    • Pedersen, K.1    Arlinger, J.2    Ekendahl, S.3    Hallbeck, L.4
  • 64
    • 34247153458 scopus 로고    scopus 로고
    • Analytical methodology for TEX86 paleothermometry by high-performance liquid chromatography/atmospheric pressure chemical ionization-mass spectrometry
    • Schouten, S., Huguet, C., Hopmans, E. G., Kienhuis, M VM and Damste, J SS (2007) Analytical methodology for TEX86 paleothermometry by high-performance liquid chromatography/atmospheric pressure chemical ionization-mass spectrometry. Anal Chem, 79, pp. 2940-2944.
    • (2007) Anal Chem , vol.79 , pp. 2940-2944
    • Schouten, S.1    Huguet, C.2    Hopmans, E.G.3    Kienhuis, M.V.M.4    Damste, J.S.S.5
  • 65
    • 36248931414 scopus 로고    scopus 로고
    • Molecular characterization of microbial communities in deep coal seam groundwater of northern Japan
    • Shimizu, S., Akiyama, M., Naganuma, T., Fujioka, M., Nako, M. and Ishijima, Y. (2007) Molecular characterization of microbial communities in deep coal seam groundwater of northern Japan. Geobiology, 5, pp. 423-433.
    • (2007) Geobiology , vol.5 , pp. 423-433
    • Shimizu, S.1    Akiyama, M.2    Naganuma, T.3    Fujioka, M.4    Nako, M.5    Ishijima, Y.6
  • 66
    • 0024842297 scopus 로고
    • Distribution of aerobic bacteria, protozoa, algae and fungi in deep subsurface sediments
    • Sinclair, J. L. and Ghiorse, W. C. (1989) Distribution of aerobic bacteria, protozoa, algae and fungi in deep subsurface sediments. Geomicrobiol J, 7, pp. 15-31.
    • (1989) Geomicrobiol J , vol.7 , pp. 15-31
    • Sinclair, J.L.1    Ghiorse, W.C.2
  • 68
    • 0031943683 scopus 로고    scopus 로고
    • Relations between depth of burial, vitrinite reflectance and geothermal gradient
    • Suggate, R. P. (1998) Relations between depth of burial, vitrinite reflectance and geothermal gradient. J Petrol Geol, 21, pp. 5-32.
    • (1998) J Petrol Geol , vol.21 , pp. 5-32
    • Suggate, R.P.1
  • 69
    • 0036766875 scopus 로고    scopus 로고
    • Application of Rank(S-r), a maturity index based on chemical analyses of coals
    • Suggate, R. P. (2002) Application of Rank(S-r), a maturity index based on chemical analyses of coals. Mar Petrol Geol, 19, pp. 929-950.
    • (2002) Mar Petrol Geol , vol.19 , pp. 929-950
    • Suggate, R.P.1
  • 70
    • 0012715939 scopus 로고    scopus 로고
    • Guidelines for assessing the petroleum potential of coaly source rocks using Rock-Eval pyrolysis
    • Sykes, R. and Snowdon, L. R. (2002) Guidelines for assessing the petroleum potential of coaly source rocks using Rock-Eval pyrolysis. Organ Geochem, 33, pp. 1441-1455.
    • (2002) Organ Geochem , vol.33 , pp. 1441-1455
    • Sykes, R.1    Snowdon, L.R.2
  • 71
    • 10644294903 scopus 로고    scopus 로고
    • Quantitative analysis of bacterial communities from Mediterranean sapropels based on cultivation-dependent methods
    • Suss, J., Engelen, B., Cypionka, H. and Sass, H. (2004) Quantitative analysis of bacterial communities from Mediterranean sapropels based on cultivation-dependent methods. FEMS Microbiol Ecol, 51, pp. 109-121.
    • (2004) FEMS Microbiol Ecol , vol.51 , pp. 109-121
    • Suss, J.1    Engelen, B.2    Cypionka, H.3    Sass, H.4
  • 73
    • 0037383728 scopus 로고    scopus 로고
    • Shifts in archaeal communities associated with lithological and geochemical variations in subsurface Cretaceous rock
    • Takai, K., Mormile, M. R., McKinley, J. P., Brockman, F. J., Holben, W. E., Kovacik, W. P. and Fredrickson, J. K. (2003) Shifts in archaeal communities associated with lithological and geochemical variations in subsurface Cretaceous rock. Environ Microbiol, 5, pp. 309-320.
    • (2003) Environ Microbiol , vol.5 , pp. 309-320
    • Takai, K.1    Mormile, M.R.2    McKinley, J.P.3    Brockman, F.J.4    Holben, W.E.5    Kovacik, W.P.6    Fredrickson, J.K.7
  • 74
    • 0031828298 scopus 로고    scopus 로고
    • Sulfur cycling in the terrestrial subsurface: Commensal interactions, spatial scales, and microbial heterogeneity
    • Ulrich, G. A., Martino, D., Burger, K., Routh, J., Grossman, E. L., Ammerman, J. W. and Suflita, J. M. (1998) Sulfur cycling in the terrestrial subsurface: Commensal interactions, spatial scales, and microbial heterogeneity. Microb Ecol, 36, pp. 141-151.
    • (1998) Microb Ecol , vol.36 , pp. 141-151
    • Ulrich, G.A.1    Martino, D.2    Burger, K.3    Routh, J.4    Grossman, E.L.5    Ammerman, J.W.6    Suflita, J.M.7
  • 75
    • 0142091782 scopus 로고    scopus 로고
    • Assessment of bacterial community structure in the deep sub-seafloor biosphere by 16S rDNA-based techniques: A cautionary tale
    • Webster, G., Newberry, C. J., Fry, J. C. and Weightman, A. J. (2003) Assessment of bacterial community structure in the deep sub-seafloor biosphere by 16S rDNA-based techniques: A cautionary tale. J Microbiol Meth, 55, pp. 155-164.
    • (2003) J Microbiol Meth , vol.55 , pp. 155-164
    • Webster, G.1    Newberry, C.J.2    Fry, J.C.3    Weightman, A.J.4
  • 76
    • 33746716094 scopus 로고    scopus 로고
    • Prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin
    • Webster, G., Parkes, R. J., Cragg, B. A., Newberry, C. J., Weightman, A. J. and Fry, J. C. (2006) Prokaryotic community composition and biogeochemical processes in deep subseafloor sediments from the Peru Margin. FEMS Microbiol Ecol, 58, pp. 65-85.
    • (2006) FEMS Microbiol Ecol , vol.58 , pp. 65-85
    • Webster, G.1    Parkes, R.J.2    Cragg, B.A.3    Newberry, C.J.4    Weightman, A.J.5    Fry, J.C.6
  • 77
    • 0036806079 scopus 로고    scopus 로고
    • Geomicrobiology of deep, low organic carbon sediments in the Woodlark Basin, Pacific Ocean
    • Wellsbury, P., Mather, I. and Parkes, R. J. (2002) Geomicrobiology of deep, low organic carbon sediments in the Woodlark Basin, Pacific Ocean. FEMS Microbiol Ecol, 42, pp. 59-70.
    • (2002) FEMS Microbiol Ecol , vol.42 , pp. 59-70
    • Wellsbury, P.1    Mather, I.2    Parkes, R.J.3
  • 78
    • 0033997127 scopus 로고    scopus 로고
    • The geomicrobiology of deep marine sediments from Blake Ridge containing methane hydrate (Sites 994, 995, and 997)
    • Wellsbury, P., Goodman, K., Cragg, B. A. and Parkes, R. J. (2000) The geomicrobiology of deep marine sediments from Blake Ridge containing methane hydrate (Sites 994, 995, and 997). Proc Ocean Drill Prog: Sci Res, 164, pp. 379-391.
    • (2000) Proc Ocean Drill Prog: Sci Res , vol.164 , pp. 379-391
    • Wellsbury, P.1    Goodman, K.2    Cragg, B.A.3    Parkes, R.J.4
  • 80
    • 0035963378 scopus 로고    scopus 로고
    • Biodegradation of oil in uplifted basins prevented by deep-burial sterilization
    • Wilhelms, A., Larter, S. R., Head, I., Farrimond, P., di-Primio, R. and Zwach, C. (2001) Biodegradation of oil in uplifted basins prevented by deep-burial sterilization. Nature, 411, pp. 1034-1037.
    • (2001) Nature , vol.411 , pp. 1034-1037
    • Wilhelms, A.1    Larter, S.R.2    Head, I.3    Farrimond, P.4    di-Primio, R.5    Zwach, C.6
  • 81
    • 11244344442 scopus 로고    scopus 로고
    • Efficient and rapid method for extraction of intact phospholipids from sediments combined with molecular structure elucidation using LC-ESI-MS-MS analysis
    • Zink, K. G. and Mangelsdorf, K. (2004) Efficient and rapid method for extraction of intact phospholipids from sediments combined with molecular structure elucidation using LC-ESI-MS-MS analysis. Anal Bioanal Chem, 380, pp. 798-812.
    • (2004) Anal Bioanal Chem , vol.380 , pp. 798-812
    • Zink, K.G.1    Mangelsdorf, K.2
  • 82
    • 0038243714 scopus 로고    scopus 로고
    • Intact phospholipids-microbial "life markers" in marine deep subsurface sediments
    • Zink, K. G., Wilkes, H., Disko, U., Elvert, M. and Horsfield, B. (2003) Intact phospholipids-microbial "life markers" in marine deep subsurface sediments. Orga Geochem, 34, pp. 755-769.
    • (2003) Orga Geochem , vol.34 , pp. 755-769
    • Zink, K.G.1    Wilkes, H.2    Disko, U.3    Elvert, M.4    Horsfield, B.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.