A unique influenza A (H5N1) virus causing a focal poultry outbreak in 2007 in Manipur, India

Virology Journal

Volumn 6, Issue , 2009, Pages

  Mishra, Akhilesh C ^a   Cherian, Sarah S ^a   Chakrabarti, Alok K ^a   Pawar, Shailesh D ^a   Jadhav, Santosh M ^a   Pal, Biswajoy ^a   Raut, Satish ^a   Koratkar, Santosh ^a   Kode, Sadhana S ^a  

^a NATIONAL INSTITUTE OF VIROLOGY   (India)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHINA; CONTROLLED STUDY; DNA CLEAVAGE; DNA POLYMORPHISM; DUCKS AND GEESE; EPIDEMIC; GEOGRAPHY; HEMAGGLUTINATION; INDIA; INFLUENZA VIRUS A; MONGOLIA; NONHUMAN; POULTRY; RUSSIAN FEDERATION; VIRUS GENOME; VIRUS ISOLATION; VIRUS STRAIN; VIRUS TRANSMISSION; ANIMAL; AVIAN INFLUENZA; BIRD DISEASE; CLASSIFICATION; DNA SEQUENCE; GENETICS; INFLUENZA VIRUS A H5N1; ISOLATION AND PURIFICATION; PHYLOGENY; POPULATION MIGRATION; VIROLOGY;

ANATIDAE; AVES; CYGNUS CYGNUS; INFLUENZA A VIRUS;

INFLUENZA VIRUS HEMAGGLUTININ;

ANIMAL MIGRATION; ANIMALS; DISEASE OUTBREAKS; HEMAGGLUTININ GLYCOPROTEINS, INFLUENZA VIRUS; INDIA; INFLUENZA A VIRUS, H5N1 SUBTYPE; INFLUENZA IN BIRDS; PHYLOGENY; POULTRY; POULTRY DISEASES; SEQUENCE ANALYSIS, DNA;

EID: 62149111156     PISSN: None     EISSN: 1743422X     Source Type: Journal    
DOI: 10.1186/1743-422X-6-26     Document Type: Article

References (41)

1. World Health Organization OIE. http://www.oie.int/eng/info-ev/en-AI- avianinfluenza.htm
2. Genetic characterization of the pathogenic influenza A/Goose/Guangdong/1/ 96 (H5N1) virus: similarity of its hemagglutinin gene to those of H5N1 viruses from the 1997 outbreaks in Hong Kong. X Xu K Subbarao NK Cox Y Guo, Virology 1999 261 15 19 10.1006/viro.1999.9820 10484749
3. Human Influenza A H5N1 virus related to a highly pathogenic avian influenza virus. EC Claas AD Osterhaus R Van Beek JC De Jong GF Rimmelzwaan DA Senne, Lancet 1998 351 472 7 10.1016/S0140-6736(97)11212-0 9482438
4. Emergence of multiple genotypes of H5N1 avian influenza viruses in Hong Kong SAR. Y Guan JS Peiris AS Lipatov TM Ellis KC Dyrting S Krauss LJ Zhang RG Webster KF Shortridge, Proc Natl Acad Sci USA 2002 99 8950 5 12077307 10.1073/pnas.132268999
5. Characterization of highly pathogenic H5N1 avian influenza A viruses isolated from South Korea. CW Lee DL Suarez TM Tumpey HW Sung, J Virol 2005 79 3692 702 15731263 10.1128/JVI.79.6.3692-3702.2005
6. Emergence and predominance of an H5N1 influenza variant in China. GJ Smith XH Fan J Wang KS Li K Qin, Proc Natl Acad Sci USA 2006 103 16936 41 17075062 10.1073/pnas.0608157103
7. Characterization of a highly pathogenic H5N1 influenza virus derived from bar-headed geese in China. JY Zhou HG Shen HX Chen GZ Tong M Liao HC Yang JX Liu, J Gen Virol 2006 87 1823 33 10.1099/vir.0.81800-0 16760384
8. Properties and dissemination of H5N1 viruses isolated during an influenza outbreak in migratory waterfowl in western China. H Chen Y Li Z Li J Shi K Shinya G Deng Q Qi G Tian S Fan H Zhao Y Sun Y Kawaoka, J Virol 2006 80 5976 83 16731936 10.1128/JVI.00110-06
9. Avian flu: multiple introductions of H5N1 in Nigeria. MF Ducatez CM Olinger AA Owoade S De Landtsheer W Ammerlaan HG Niesters AD Osterhaus RA Fouchier CP Muller, Nature 2006 442 37 10.1038/442037a 16823443
10. Genesis of a highly pathogenic and potentially pandemic H5N1 infleunza virus in eastern Asia. KS Li Y Guan J Wang, Nature 2004 430 209 13 10.1038/nature02746 15241415
11. Evolution of H5N1 avian influenza viruses in Asia. The World Health Organization Global Influenza Program Surveillance Network, Emerg Infect Dis 2005 11 1515 21 16318689
12. Genome analysis linking recent European and African influenza (H5N1) viruses. SL Salzberg C Kingsford G Cattoli DJ Spiro DA Janies MM Aly IH Brown E Couacy-Hymann, Emerg Infect Dis 2007 13 713 8 17553249
13. Avian Influenza in India, Follow-up report No. 4 final report. 19 33 http://www.oie.int/eng/info/hebdo/AIS-05.HTM#Sec5
14. Characterization of the complete genome of influenza A (H5N1) virus isolated during the 2006 outbreak in poultry in India. K Ray VA Potdar SS Cherian SD Pawar SM Jadhav SR Waregaonkar AA Joshi AC Mishra, Virus Genes 2008 36 345 53 10.1007/s11262-007-0195-8 18214665
15. Hemagglutinin inhibition in Concepts and Procedures for Laboratory-Based Influenza Surveillance. AP Kendal MS Pereira JJ Skehel, Centres for Disease Control and Prevention an Pan American Health Organization, Atlanta B17-B35, Kendal AP, Pereira MS, Skehel JJ, 1982
16. Recommended laboratory tests to identify avian influenza A virus in specimens from humans. WHO http://www.who.int/csr/disease/avian-influenza/ guidelines/avian-labtests2.pdf Accessed 21 Nov 2006
17. Universal primer set for the full-length amplification of all influenza A viruses. E Hoffmann J Stech Y Guan RG Webster DR Perez, Arch Virol 2001 146 2275 89 10.1007/s007050170002 11811679
18. Mr Bayes 3: Bayesian phylogenetic inference under mixed models. F Ronquist JP Huelsenbeck, Bioinformatics 2003 19 1572 74 10.1093/bioinformatics/ btg180 12912839
19. Structure and receptor specificity of the hemagglutinin from an H5N1 influenza virus. J Stevens O Blixt TM Tumpey JK Taubenberger JC Paulson IA Wilson, Science 2006 312 404 12 10.1126/science.1124513 16543414
20. Molecular changes associated with the transmission of avian influenza a H5N1 and H9N2 viruses to humans. M Shaw L Cooper X Xu W Thompson S Krauss Y Guan N Zhou A Klimov N Cox R Webster W Lim K Shortridge K Subbarao, J Med Virol 2002 66 107 14 10.1002/jmv.2118 11748666
21. PB2 amino acid at position 627 affects replicative efficiency, but not cell tropism, of Hong Kong H5N1 influenza A viruses in mice. K Shinya S Hamm M Hatta H Ito T Ito Y Kawaoka, Virology 2004 320 258 66 10.1016/j.virol.2003.11. 030 15016548
22. The viral polymerase mediates adaptation of an avian influenza virus to a mammalian host. GB Gabriel T Dauber O Wolff HD Planz Klenk J Stech, Proc Natl Acad Sci USA 2005 102 18590 95 16339318 10.1073/pnas.0507415102
23. A novel influenza A virus mitochondrial protein that induces cell death. W Chen PA Calvo D Malide J Gibbs U Schubert I Bacik, Nat Med 2001 7 1306 12 10.1038/nm1201-1306 11726970
24. Influenza A Virus PB1-F2 Protein Contributes to Viral Pathogenesis in Mice. D Zamarin MB Ortigoza P Palese, J Virol 2006 80 7976 83 16873254 10.1128/JVI.00415-06
25. Large-scale sequence analysis of avian influenza isolates. JC Obenauer J Denson PK Mehta X Su, Science 2006 311 1576 80 10.1126/science.1121586 16439620
26. The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design. RJ Russell LF Haire DJ Stevens PJ Collins YP Lin GM Blackburn AJ Hay SJ Gamblin JJ Skehel, Nature 2006 443 45 9 10.1038/nature05114 16915235
27. Emergence of amantadine-resistant influenza A viruses: epidemiological study. H Suzuki R Saito H Masuda H Oshitant I Sato, J Infect Chemother 2003 9 195 200 10.1007/s10156-003-0262-6 14513385
28. Characterization of a highly pathogenic H5N1 influenza virus derived from bar-headed geese in China. J Zhou H Shen H Chen G Tong M Liao H Yang J Liu, J Gen Virol 2006 87 1823 33 10.1099/vir.0.81800-0 16760384
29. The influenza A virus PB1-F2 protein targets the inner mitochondrial membrane via a predicted basic amphipathic helix that disrupts mitochondrial function. JS Gibbs D Malide F Hornung JR Bennink JW Yewdell, J Virol 2003 77 7214 7224 12805420 10.1128/JVI.77.13.7214-7224.2003
30. Mitochondrial targeting sequence of the influenza A virus PB1-F2 protein and its function in mitochondria. H Yamada R Chounan Y Higashi N Kurihara H Kido, FEBS Lett 2004 578 331 336 10.1016/j.febslet.2004.11.017 15589841
31. The proapoptotic influenza A virus protein PB1-F2 regulates viral polymerase activity by interaction with the PB1 protein. I Mazur D Anhlan D Mitzner L Wixler U Schubert S Ludwig, Cellular Microbiology 2007 1140 52 18182088
32. Prevalence of PB1-F2 of influenza A viruses. R Zell A Krumbholz A Eitner R Krieg K Halbhuber P Wutzler, J Gen Virol 2007 88 536 46 10.1099/vir.0.82378-0 17251572
33. A single mutation in the PB1-F2 of H5N1 (HK/97) and 1918 Influenza A viruses contributes to increased virulence. GM Conenello D Zamarin LA Perrone T Tumpey P Palese, PLoS Pathog 2007 3 10 1414 1421 10.1371/journal.ppat.0030141 17922571
34. Assembly of an SAP97-AKAP79-cAMP-dependent protein kinase scaffold at the type I PSD-95/DLG/ZOI motif of the Human betaI-Adrenergic receptor generates a receptosome involved in receptor recycling and networking. LA Gardner AP Naren SW Bahouth, J Biol Chem 2007 282 5085 99 10.1074/jbc.M608871200 17170109
35. Interaction with cystic fibrosis transmembrane conductance regulator-associated ligand (CAL) inhibits betaI-adrenergic receptor surface expression. J He M Bellini J Xu AM Castleberry RA Hall, J Biol Chem 2004 279 50190 50196 10.1074/jbc.M404876200 15358775
36. Avian influenza outbreaks in chickens, Bangladesh. PK Biswas JP Christensen SS Ahmed H Barua A Das MH Rahman M Giasuddin AS Hannan MA Habib A Ahad AS Rahman R Faruque NC Debnath, Emerg Infect Dis 2008 14 1909 1912 19046518 10.3201/eid1412.071567
37. Molecular characterization and phylogenetic analysis of highly pathogenic H5N1 avian influenza virus of chickens of Bangladesh. MR Islam MA Baqi M Giasuddin MA Samad, Poster presented at the Bangkok International Conference on Avian Influenza: integration from knowledge to control, Jan 23-25, 2008 Bangkok, Thailand
38. H5N1 avian influenza, Timeline of major events. World Health Organization, Accessed 14 July 2008
39. H5N1 avian influenza re-emergence of Lake Qinghai: phyloegenetic and antigenic analyses of the newly isolated viruses and roles of migratory birds in virus circulation. G Wang D Zhan L Li F Lei, J Gen Virol 2008 89 697 702 10.1099/vir.0.83419-0 18272760
40. Influenza (H5N1) viruses in poultry, Russian Federation, 2005-2006. AS Lipatov VA Evseenko HL Yen AV Zaykovskaya AG Durimanov SI Zolotykh SV Netesov IG Drozdov GG Onishchenko RG Webster AM Shestopalov, Emerg Infect Dis 2007 13 539 46 17553267
41. Avian flu: H5N1 virus outbreak in migratory waterfowl. H Chen GJ Smith SY Zhang K Qin J Wang KS Li RG Webster JS Peiris Y Guan, Nature 2005 436 191 2 10.1038/nature03974 16007072