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Volumn 30, Issue 3, 2009, Pages

The proportion of mutations predicted to have a deleterious effect differs between gain and loss of function genes in neurodegenerative disease

Author keywords

Bioinformatics; Gain of function genes; Missense mutation prediction programs; SOD1

Indexed keywords

COPPER ZINC SUPEROXIDE DISMUTASE;

EID: 61649101716     PISSN: 10597794     EISSN: None     Source Type: Journal    
DOI: 10.1002/humu.20939     Document Type: Article
Times cited : (19)

References (24)
  • 1
    • 37249032200 scopus 로고    scopus 로고
    • Accurate prediction of the functional significance of single nucleotide polymorphisms and mutations in the ABCA1 gene
    • Brunham LR, Singaraja RR, Pape TD, Kejariwal A, Thomas PD, Hayden MR. 2005. Accurate prediction of the functional significance of single nucleotide polymorphisms and mutations in the ABCA1 gene. PLoS Genet 1(6):e83.
    • (2005) PLoS Genet , vol.1 , Issue.6
    • Brunham, L.R.1    Singaraja, R.R.2    Pape, T.D.3    Kejariwal, A.4    Thomas, P.D.5    Hayden, M.R.6
  • 4
    • 0037081740 scopus 로고    scopus 로고
    • Spastin, the protein mutated in autosomal dominant hereditary spastic paraplegia, is involved in microtubule dynamics
    • Errico A, Ballabio A, Rugarli EI. 2002. Spastin, the protein mutated in autosomal dominant hereditary spastic paraplegia, is involved in microtubule dynamics. Hum Mol Genet 11(2):153-63.
    • (2002) Hum Mol Genet , vol.11 , Issue.2 , pp. 153-163
    • Errico, A.1    Ballabio, A.2    Rugarli, E.I.3
  • 5
    • 0037013264 scopus 로고    scopus 로고
    • Decreased metallation and activity in subsets of mutant superoxide dismutases associated with familial amyotrophic lateral sclerosis
    • Hayward LJ, Rodriguez JA, Kim JW, Tiwari A, Goto JJ, Cabelli DE, Valentine JS, Brown RH, Jr. 2002. Decreased metallation and activity in subsets of mutant superoxide dismutases associated with familial amyotrophic lateral sclerosis. J Biol Chem 277(18):15923-31.
    • (2002) J Biol Chem , vol.277 , Issue.18 , pp. 15923-15931
    • Hayward, L.J.1    Rodriguez, J.A.2    Kim, J.W.3    Tiwari, A.4    Goto, J.J.5    Cabelli, D.E.6    Valentine, J.S.7    Brown Jr., R.H.8
  • 11
    • 34247128636 scopus 로고    scopus 로고
    • Computational prediction of the effects of non-synonymous single nucleotide polymorphisms in human DNA repair genes
    • Nakken S, Alseth I, Rognes T. 2007. Computational prediction of the effects of non-synonymous single nucleotide polymorphisms in human DNA repair genes. Neuroscience 145(4):1273-9.
    • (2007) Neuroscience , vol.145 , Issue.4 , pp. 1273-1279
    • Nakken, S.1    Alseth, I.2    Rognes, T.3
  • 12
    • 0036119504 scopus 로고    scopus 로고
    • Accounting for human polymorphisms predicted to affect protein function
    • Ng PC, Henikoff S. 2002. Accounting for human polymorphisms predicted to affect protein function. Genome Res 12(3):436-46.
    • (2002) Genome Res , vol.12 , Issue.3 , pp. 436-446
    • Ng, P.C.1    Henikoff, S.2
  • 13
    • 0043122919 scopus 로고    scopus 로고
    • SIFT: Predicting amino acid changes that affect protein function
    • Ng PC, Henikoff S. 2003. SIFT: Predicting amino acid changes that affect protein function. Nucleic Acids Res 31(13):3812-4.
    • (2003) Nucleic Acids Res , vol.31 , Issue.13 , pp. 3812-3814
    • Ng, P.C.1    Henikoff, S.2
  • 14
    • 33750353461 scopus 로고    scopus 로고
    • Predicting the effects of amino acid substitutions on protein function
    • Ng PC, Henikoff S. 2006. Predicting the effects of amino acid substitutions on protein function. Annu Rev Genomics Hum Genet 7:61-80.
    • (2006) Annu Rev Genomics Hum Genet , vol.7 , pp. 61-80
    • Ng, P.C.1    Henikoff, S.2
  • 15
    • 0036713510 scopus 로고    scopus 로고
    • Human non-synonymous SNPs: Server and survey
    • Ramensky V, Bork P, Sunyaev S. 2002. Human non-synonymous SNPs: server and survey. Nucleic Acids Res 30(17):3894-900.
    • (2002) Nucleic Acids Res , vol.30 , Issue.17 , pp. 3894-3900
    • Ramensky, V.1    Bork, P.2    Sunyaev, S.3
  • 16
    • 0037013224 scopus 로고    scopus 로고
    • Familial amyotrophic lateral sclerosis-associated mutations decrease the thermal stability of distinctly metallated species of human copper/zinc superoxide dismutase
    • Rodriguez JA, Valentine JS, Eggers DK, Roe JA, Tiwari A, Brown RH, Jr., Hayward LJ. 2002. Familial amyotrophic lateral sclerosis-associated mutations decrease the thermal stability of distinctly metallated species of human copper/zinc superoxide dismutase. J Biol Chem 277(18):15932-7.
    • (2002) J Biol Chem , vol.277 , Issue.18 , pp. 15932-15937
    • Rodriguez, J.A.1    Valentine, J.S.2    Eggers, D.K.3    Roe, J.A.4    Tiwari, A.5    Brown Jr., R.H.6    Hayward, L.J.7
  • 17
    • 0027401203 scopus 로고    scopus 로고
    • Rosen DR, Siddique T, Patterson D, Figlewicz DA, Sapp P, Hentati A, Donaldson D, Goto J, O'Regan JP, Deng HX, Z. R, Krizus A, McKenna-Yasek D, Cayabyab A, Gaston SM, Berger R, Tanzi RE, Halperin JJ, Herzfeldt B, Van den Bergh R, Hung WY, Bird T, Deng G, Mulder DW, Smyth C, Laing NG, Soriano E, Pericak-Vance M, Haines J, Rouleau GA, Gusella JS, Horvitz HR, Brown RH. 1993. Mutations in Cu/Zn superoxide dismutase gene are associated with familial amyotrophic lateral sclerosis. Nature 362(6415):59-62.
    • Rosen DR, Siddique T, Patterson D, Figlewicz DA, Sapp P, Hentati A, Donaldson D, Goto J, O'Regan JP, Deng HX, Z. R, Krizus A, McKenna-Yasek D, Cayabyab A, Gaston SM, Berger R, Tanzi RE, Halperin JJ, Herzfeldt B, Van den Bergh R, Hung WY, Bird T, Deng G, Mulder DW, Smyth C, Laing NG, Soriano E, Pericak-Vance M, Haines J, Rouleau GA, Gusella JS, Horvitz HR, Brown RH. 1993. Mutations in Cu/Zn superoxide dismutase gene are associated with familial amyotrophic lateral sclerosis. Nature 362(6415):59-62.
  • 18
    • 33749254585 scopus 로고    scopus 로고
    • Applications of computational algorithm tools to identify functional SNPs in cytokine genes
    • Shen J, Deininger PL, Zhao H. 2006. Applications of computational algorithm tools to identify functional SNPs in cytokine genes. Cytokine 35(1-2):62-6.
    • (2006) Cytokine , vol.35 , Issue.1-2 , pp. 62-66
    • Shen, J.1    Deininger, P.L.2    Zhao, H.3
  • 22
    • 7444227970 scopus 로고    scopus 로고
    • Coding single-nucleotide polymorphisms associated with complex vs. Mendelian disease: Evolutionary evidence for differences in molecular effects
    • Thomas PD, Kejariwal A. 2004. Coding single-nucleotide polymorphisms associated with complex vs. Mendelian disease: evolutionary evidence for differences in molecular effects. Proc Natl Acad Sci U S A 101(43):15398-403.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , Issue.43 , pp. 15398-15403
    • Thomas, P.D.1    Kejariwal, A.2
  • 23
    • 22244479388 scopus 로고    scopus 로고
    • Copper-zinc superoxide dismutase and amyotrophic lateral sclerosis
    • Valentine JS, Doucette PA, Zittin Potter S. 2005. Copper-zinc superoxide dismutase and amyotrophic lateral sclerosis. Annu Rev Biochem 74:563-93.
    • (2005) Annu Rev Biochem , vol.74 , pp. 563-593
    • Valentine, J.S.1    Doucette, P.A.2    Zittin Potter, S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.