-
2
-
-
34548758543
-
Splicing in disease: Disruption of the splicing code and the decoding machinery
-
10.1038/nrg2164 17726481
-
Wang GS Cooper TA Splicing in disease: Disruption of the splicing code and the decoding machinery Nature Reviews Genetics 2007, 8(10):749-761 10.1038/nrg2164 17726481
-
(2007)
Nature Reviews Genetics
, vol.8
, Issue.10
, pp. 749-761
-
-
Wang, G.S.1
Cooper, T.A.2
-
3
-
-
33746259640
-
Splicing regulators: Targets and drugs
-
1414078 16356274
-
Yeo GWM Splicing regulators: Targets and drugs Genome Biology 2005, 6(12) 1414078 16356274
-
(2005)
Genome Biology
, vol.6
, Issue.12
-
-
Yeo, G.W.M.1
-
4
-
-
0036337915
-
A genomic view of alternative splicing
-
10.1038/ng0102-13 11753382
-
Modrek B Lee C A genomic view of alternative splicing Nature Genetics 2002, 30(1):13-19 10.1038/ng0102-13 11753382
-
(2002)
Nature Genetics
, vol.30
, Issue.1
, pp. 13-19
-
-
Modrek, B.1
Lee, C.2
-
6
-
-
0037012922
-
Genomewide analysis of mRNA processing in yeast using splicing-specific microarrays
-
10.1126/science.1069415 11988574
-
Clark TA Sugnet CW Ares M Genomewide analysis of mRNA processing in yeast using splicing-specific microarrays Science 2002, 296(5569):907-910 10.1126/science.1069415 11988574
-
(2002)
Science
, vol.296
, Issue.5569
, pp. 907-910
-
-
Clark, T.A.1
Sugnet, C.W.2
Ares, M.3
-
7
-
-
0036215612
-
Profiling alternative splicing on fiber-optic arrays
-
10.1038/nbt0402-353 11923840
-
Yeakley JM Fan JB Doucet D Luo L Wickham E Ye Z Chee MS Fu XD Profiling alternative splicing on fiber-optic arrays Nature Biotechnology 2002, 20(4):353-358 10.1038/nbt0402-353 11923840
-
(2002)
Nature Biotechnology
, vol.20
, Issue.4
, pp. 353-358
-
-
Yeakley, J.M.1
Fan, J.B.2
Doucet, D.3
Luo, L.4
Wickham, E.5
Ye, Z.6
Chee, M.S.7
Fu, X.D.8
-
8
-
-
0347623371
-
Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays
-
10.1126/science.1090100 14684825
-
Johnson JM Castle J Garrett-Engele P Kan ZY Loerch PM Armour CD Santos R Schadt EE Stoughton R Shoemaker DD Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays Science 2003, 302(5653):2141-2144 10.1126/science.1090100 14684825
-
(2003)
Science
, vol.302
, Issue.5653
, pp. 2141-2144
-
-
Johnson, J.M.1
Castle, J.2
Garrett-Engele, P.3
Kan, Z.Y.4
Loerch, P.M.5
Armour, C.D.6
Santos, R.7
Schadt, E.E.8
Stoughton, R.9
Shoemaker, D.D.10
-
9
-
-
19944365069
-
Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform
-
10.1016/j.molcel.2004.12.004 15610736
-
Pan Q Shai O Misquitta C Zhang W Saltzman AL Mohammad N Babak T Siu H Hughes TR Morris QD et al Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform Molecular Cell 2004, 16(6):929-941 10.1016/j.molcel.2004.12.004 15610736
-
(2004)
Molecular Cell
, vol.16
, Issue.6
, pp. 929-941
-
-
Pan, Q.1
Shai, O.2
Misquitta, C.3
Zhang, W.4
Saltzman, A.L.5
Mohammad, N.6
Babak, T.7
Siu, H.8
Hughes, T.R.9
Morris, Q.D.10
-
10
-
-
23044431574
-
Nova regulates brain-specific splicing to shape the synapse
-
10.1038/ng1610 16041372
-
Ule J Ule A Spencer J Williams A Hu JS Cline M Wang H Clark T Fraser C Ruggiu M et al Nova regulates brain-specific splicing to shape the synapse Nature Genetics 2005, 37(8):844-852 10.1038/ng1610 16041372
-
(2005)
Nature Genetics
, vol.37
, Issue.8
, pp. 844-852
-
-
Ule, J.1
Ule, A.2
Spencer, J.3
Williams, A.4
Hu, J.S.5
Cline, M.6
Wang, H.7
Clark, T.8
Fraser, C.9
Ruggiu, M.10
-
11
-
-
33644864739
-
Inferring global levels of alternative splicing isoforms using a generative model of microarray data
-
10.1093/bioinformatics/btk028 16403798
-
Shai O Morris QD Blencowe BJ Frey BJ Inferring global levels of alternative splicing isoforms using a generative model of microarray data Bioinformatics 2006, 22(5):606-613 10.1093/bioinformatics/btk028 16403798
-
(2006)
Bioinformatics
, vol.22
, Issue.5
, pp. 606-613
-
-
Shai, O.1
Morris, Q.D.2
Blencowe, B.J.3
Frey, B.J.4
-
12
-
-
29144480020
-
ANOSVA: A statistical method for detecting splice variation from expression data
-
10.1093/bioinformatics/bti1010 15961447
-
Cline MS Blume J Cawley S Clark TA Hu JS Lu G Salomonis N Wang H Williams A ANOSVA: A statistical method for detecting splice variation from expression data Bioinformatics 2005, 21:I107-I115 10.1093/ bioinformatics/bti1010 15961447
-
(2005)
Bioinformatics
, vol.21
-
-
Cline, M.S.1
Blume, J.2
Cawley, S.3
Clark, T.A.4
Hu, J.S.5
Lu, G.6
Salomonis, N.7
Wang, H.8
Williams, A.9
-
13
-
-
16544378889
-
Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data
-
Le K Mitsouras K Roy M Wang Q Xu Q Nelson SF Lee C Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data Nucleic Acids Research 2004, 32(22)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.22
-
-
Le, K.1
Mitsouras, K.2
Roy, M.3
Wang, Q.4
Xu, Q.5
Nelson, S.F.6
Lee, C.7
-
14
-
-
34547632484
-
Discovery of tissue-specific exons using comprehensive human exon microarrays
-
1896007 17456239 10.1186/gb-2007-8-4-r64
-
Clark TA Schweitzer AC Chen TX Staples MK Lu G Wang H Williams A Blume JE Discovery of tissue-specific exons using comprehensive human exon microarrays Genome Biology 2007, 8(4):R64 1896007 17456239 10.1186/ gb-2007-8-4-r64
-
(2007)
Genome Biology
, vol.8
, Issue.4
-
-
Clark, T.A.1
Schweitzer, A.C.2
Chen, T.X.3
Staples, M.K.4
Lu, G.5
Wang, H.6
Williams, A.7
Blume, J.E.8
-
15
-
-
34250795169
-
Identification of differentially regulated splice variants and novel exons in glial brain tumors using exon expression arrays
-
10.1158/0008-5472.CAN-06-2869 17575129
-
French PJ Peeters J Horsman S Duijm E Siccama I Bent van den MJ Luider TM Kros JM Spek van der P Smitt PAS Identification of differentially regulated splice variants and novel exons in glial brain tumors using exon expression arrays Cancer Research 2007, 67(12):5635-5642 10.1158/ 0008-5472.CAN-06-2869 17575129
-
(2007)
Cancer Research
, vol.67
, Issue.12
, pp. 5635-5642
-
-
French, P.J.1
Peeters, J.2
Horsman, S.3
Duijm, E.4
Siccama, I.5
Bent, M.J.6
Luider, T.M.7
Kros, J.M.8
Spek, P.9
Smitt, P.A.S.10
-
16
-
-
33846467191
-
Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array
-
1769375 17192196
-
Gardina PJ Clark TA Shimada B Staples MK Yang Q Veitch J Schweitzer A Awad T Sugnet C Dee S et al Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array Bmc Genomics 2006, 7 1769375 17192196
-
(2006)
Bmc Genomics
, vol.7
-
-
Gardina, P.J.1
Clark, T.A.2
Shimada, B.3
Staples, M.K.4
Yang, Q.5
Veitch, J.6
Schweitzer, A.7
Awad, T.8
Sugnet, C.9
Dee, S.10
-
17
-
-
34250756005
-
Probe Selection and Expression Index Computation of Affymetrix Exon Arrays
-
1762343 17183719 10.1371/journal.pone.0000088
-
Xing Y Kapur K Wong WH Probe Selection and Expression Index Computation of Affymetrix Exon Arrays PLoS ONE 2006, 1(1):e88 1762343 17183719 10.1371/journal.pone.0000088
-
(2006)
PLoS ONE
, vol.1
, Issue.1
-
-
Xing, Y.1
Kapur, K.2
Wong, W.H.3
-
18
-
-
34548853750
-
Exon arrays provide accurate assessments of gene expression
-
1929160 17504534
-
Kapur K Xing Y Ouyang Z Wong WH Exon arrays provide accurate assessments of gene expression Genome Biology 2007, 8(5) 1929160 17504534
-
(2007)
Genome Biology
, vol.8
, Issue.5
-
-
Kapur, K.1
Xing, Y.2
Ouyang, Z.3
Wong, W.H.4
-
20
-
-
33745037942
-
Variable window binding for mutually exclusive alternative splicing
-
1431710 16507134 10.1186/gb-2006-7-1-r2
-
Anastassiou D Liu H Varadan V Variable window binding for mutually exclusive alternative splicing Genome Biology 2006, 7(1):R2 1431710 16507134 10.1186/gb-2006-7-1-r2
-
(2006)
Genome Biology
, vol.7
, Issue.1
-
-
Anastassiou, D.1
Liu, H.2
Varadan, V.3
-
21
-
-
13444306641
-
NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
-
(Database issue)
-
Pruitt KD Tatusova T Maglott DR NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins Nucl Acids Res. 2005, 33((Database issue)):D501-504
-
(2005)
Nucl Acids Res.
, vol.33
-
-
Pruitt, K.D.1
Tatusova, T.2
Maglott, D.R.3
-
22
-
-
48149096726
-
MADS: A new and improved method for analysis of differential alternative splicing by exon-tiling microarrays
-
rna.1070208
-
Xing Y Stoilov P Kapur K Han A Jiang H Shen S Black DL Wong WH MADS: A new and improved method for analysis of differential alternative splicing by exon-tiling microarrays RNA 2008 rna.1070208.
-
(2008)
RNA
-
-
Xing, Y.1
Stoilov, P.2
Kapur, K.3
Han, A.4
Jiang, H.5
Shen, S.6
Black, D.L.7
Wong, W.H.8
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