-
2
-
-
0037263812
-
MAPPFinder: Using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data
-
Doniger,S.W., Salomonis,N., Dahlquist,K.D., Vranizan,K., Lawlor,S.C. and Conklin,B.R. (2003) MAPPFinder: Using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data. Genome Biol., 4, R7.
-
(2003)
Genome Biol.
, vol.4
-
-
Doniger, S.W.1
Salomonis, N.2
Dahlquist, K.D.3
Vranizan, K.4
Lawlor, S.C.5
Conklin, B.R.6
-
3
-
-
0026108692
-
Light-directed, spatially addressable parallel chemical synthesis
-
Fodor,S.P., Read,J.L., Pirrung,M.C., Stryer,L., Lu,A.T. and Solas,D. (1991) Light-directed, spatially addressable parallel chemical synthesis. Science, 251, 767-773.
-
(1991)
Science
, vol.251
, pp. 767-773
-
-
Fodor, S.P.1
Read, J.L.2
Pirrung, M.C.3
Stryer, L.4
Lu, A.T.5
Solas, D.6
-
4
-
-
0027909781
-
Multiplexed biochemical assays with biological chips
-
Fodor,S.P., Rava,R.P., Huang,X.C., Pease,A.C., Holmes,C.P. and Adams,C.L. (1993) Multiplexed biochemical assays with biological chips. Nature, 364, 555-556.
-
(1993)
Nature
, vol.364
, pp. 555-556
-
-
Fodor, S.P.1
Rava, R.P.2
Huang, X.C.3
Pease, A.C.4
Holmes, C.P.5
Adams, C.L.6
-
5
-
-
0034887203
-
Creating the gene ontology resource: Design and implementation
-
Gene Ontology Consortium
-
Gene Ontology Consortium (2001) Creating the gene ontology resource: design and implementation. Genome Res., 8, 1425-1433.
-
(2001)
Genome Res.
, vol.8
, pp. 1425-1433
-
-
-
6
-
-
0034924450
-
Predicting splice variant from DNA chip expression data
-
Hu,G.K., Madore,S.J., Moldover,B., Jatkoe,T., Balaban,D., Thomas,J. and Wang,Y. (2001) Predicting splice variant from DNA chip expression data. Genome Res., 7, 1237-1245.
-
(2001)
Genome Res.
, vol.7
, pp. 1237-1245
-
-
Hu, G.K.1
Madore, S.J.2
Moldover, B.3
Jatkoe, T.4
Balaban, D.5
Thomas, J.6
Wang, Y.7
-
7
-
-
0347623371
-
Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays
-
Johnson,J.M., Castle,J., Garrett-Engele,P., Kan,Z., Loerch,P., Armour,C.D., Santos,R., Schadt,E.E., Stoughton,R. and Shoemaker,D.D. (2003) Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays. Science, 302, 2141-2144.
-
(2003)
Science
, vol.302
, pp. 2141-2144
-
-
Johnson, J.M.1
Castle, J.2
Garrett-Engele, P.3
Kan, Z.4
Loerch, P.5
Armour, C.D.6
Santos, R.7
Schadt, E.E.8
Stoughton, R.9
Shoemaker, D.D.10
-
8
-
-
12144287461
-
Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22
-
Kampa,D., Cheng,J., Kapranov,P., Yamanaka,M., Brubaker,S., Cawley,S., Drenkow,J., Piccolboni,A., Bekiranov,S., Helt,G., Tammana,H. and Gingeras,T.R. (2004) Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22. Genome Res., 14, 331-342.
-
(2004)
Genome Res.
, vol.14
, pp. 331-342
-
-
Kampa, D.1
Cheng, J.2
Kapranov, P.3
Yamanaka, M.4
Brubaker, S.5
Cawley, S.6
Drenkow, J.7
Piccolboni, A.8
Bekiranov, S.9
Helt, G.10
Tammana, H.11
Gingeras, T.R.12
-
9
-
-
0345316714
-
Increase of functional diversity by alternative splicing
-
Kriventseva,E.V., Koch,I., Apweiler,R., Vingron,M., Bork,P., Gelfand,M.S. and Sunyaev,S. (2003) Increase of functional diversity by alternative splicing. Trends Genet., 19, 124-128.
-
(2003)
Trends Genet.
, vol.19
, pp. 124-128
-
-
Kriventseva, E.V.1
Koch, I.2
Apweiler, R.3
Vingron, M.4
Bork, P.5
Gelfand, M.S.6
Sunyaev, S.7
-
10
-
-
2942546059
-
The evolving roles of alternative splicing
-
Lareau,L.F., Green,R.E., Bhatnagar,R.S. and Brenner,S.E. (2004) The evolving roles of alternative splicing. Curr. Opin. Struct. Biol., 14, 273-282.
-
(2004)
Curr. Opin. Struct. Biol.
, vol.14
, pp. 273-282
-
-
Lareau, L.F.1
Green, R.E.2
Bhatnagar, R.S.3
Brenner, S.E.4
-
11
-
-
16544378889
-
Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data
-
Le,K., Mitsouras,K., Roy,M., Wang,Q., Xu,Q., Nelson,S.F. and Lee,C. (2004) Detecting tissue-specific regulation of alternative splicing as a qualitative change in microarray data. Nucleic Acids Res., 32, e180.
-
(2004)
Nucleic Acids Res.
, vol.32
-
-
Le, K.1
Mitsouras, K.2
Roy, M.3
Wang, Q.4
Xu, Q.5
Nelson, S.F.6
Lee, C.7
-
12
-
-
0035793042
-
Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection
-
Li,C. and Wong,W.H. (2001) Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection. Proc. Natl Acad. Sci. USA, 98, 31-36.
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 31-36
-
-
Li, C.1
Wong, W.H.2
-
13
-
-
0345306602
-
Large scale study of protein domain distribution in the context of alternative splicing
-
Liu,S. and Altman,R.B. (2003) Large scale study of protein domain distribution in the context of alternative splicing. Nucleic Acids Res., 31, 4828-4835.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 4828-4835
-
-
Liu, S.1
Altman, R.B.2
-
14
-
-
12244313858
-
Analysis of high density expression microarrays with signed-rank call algorithms
-
Liu,W.M., Mei,R., Di,X., Ryder,T.B., Hubbell,E., Dee,S., Webster,T.A., Harrington,C.A., Ho,M.H., Baid,J. and Smeekens,S.P. (2002) Analysis of high density expression microarrays with signed-rank call algorithms. Bioinformatics, 18, 1593-1599.
-
(2002)
Bioinformatics
, vol.18
, pp. 1593-1599
-
-
Liu, W.M.1
Mei, R.2
Di, X.3
Ryder, T.B.4
Hubbell, E.5
Dee, S.6
Webster, T.A.7
Harrington, C.A.8
Ho, M.H.9
Baid, J.10
Smeekens, S.P.11
-
15
-
-
0141483023
-
Probe selection for high-density oligonucleotide arrays
-
Mei,R., Hubbell,E., Bekiranov,S., Mittmann,M., Christians,F.C., Shen,M.M., Lu,G., Fang,J., Liu,W.M., Ryder,T. et al. (2003) Probe selection for high-density oligonucleotide arrays. Proc. Natl Acad. Sci. USA, 100, 11237-11242.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 11237-11242
-
-
Mei, R.1
Hubbell, E.2
Bekiranov, S.3
Mittmann, M.4
Christians, F.C.5
Shen, M.M.6
Lu, G.7
Fang, J.8
Liu, W.M.9
Ryder, T.10
-
16
-
-
0028246289
-
Light-generated oligonucleotide arrays for rapid DNA sequence analysis
-
Pease,A.C., Solas,D., Sullivan,E.J., Cronin,M.T., Holmes,C.P. and Fodor,S.P. (1994) Light-generated oligonucleotide arrays for rapid DNA sequence analysis. Proc. Natl Acad. Sci. USA, 91, 5022-5026.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 5022-5026
-
-
Pease, A.C.1
Solas, D.2
Sullivan, E.J.3
Cronin, M.T.4
Holmes, C.P.5
Fodor, S.P.6
-
17
-
-
1242352406
-
Assessing the impact of alternative splicing on domain interactions in the human proteome
-
Resch,A., Xing,Y., Modrek,B., Gorlick,M., Riley,R. and Lee,C. (2004) Assessing the impact of alternative splicing on domain interactions in the human proteome. J. Proteome Res., 3, 76-83.
-
(2004)
J. Proteome Res.
, vol.3
, pp. 76-83
-
-
Resch, A.1
Xing, Y.2
Modrek, B.3
Gorlick, M.4
Riley, R.5
Lee, C.6
-
19
-
-
0242700119
-
Gene structure-based splice variant deconvolution using a microarray platform
-
Wang,H., Hubbell,E., Hu,J.S., Mei,G., Cline,M., Lu,G., Clark,T., Siani-Rose,M.A., Ares,M.Jr, Kulp,D.C. and Haussler,D. (2003) Gene structure-based splice variant deconvolution using a microarray platform. Bioinformatics, 19 (Suppl 1), i315-i322.
-
(2003)
Bioinformatics
, vol.19
, Issue.SUPPL. 1
-
-
Wang, H.1
Hubbell, E.2
Hu, J.S.3
Mei, G.4
Cline, M.5
Lu, G.6
Clark, T.7
Siani-Rose, M.A.8
Ares Jr., M.9
Kulp, D.C.10
Haussler, D.11
-
20
-
-
23044533819
-
A method of consolidating and combining EST and mRNA alignments to a genome to enumerate supported splice variants
-
Springer-Verlag
-
Wheeler,R. (2002) A method of consolidating and combining EST and mRNA alignments to a genome to enumerate supported splice variants. In Proceedings of the Second International Workshop on Algorithms in Bioinformatics, 2002. Springer-Verlag, pp. 201-209.
-
(2002)
Proceedings of the Second International Workshop on Algorithms in Bioinformatics, 2002
, pp. 201-209
-
-
Wheeler, R.1
-
21
-
-
0038349624
-
Impact of alternative initiation, splicing and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptome
-
Zavolan,M., Kondo,S., Schonbach,C., Adachi,J., Hume,D.A., Hayashizaki,Y. and Gaasterland,T. (2003) Impact of alternative initiation, splicing and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptome. Genome Res., 13, 1290-1300.
-
(2003)
Genome Res.
, vol.13
, pp. 1290-1300
-
-
Zavolan, M.1
Kondo, S.2
Schonbach, C.3
Adachi, J.4
Hume, D.A.5
Hayashizaki, Y.6
Gaasterland, T.7
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