High ISSR variation in 14 surviving individuals of euryodendron excelsum (Ternstroemiaceae) endemic to China

Biochemical Genetics

Volumn 47, Issue 1-2, 2009, Pages 56-65

  Su, Yingjuan ^a   Wang, Ting ^b   Sun, Yufei ^a   Ye, Huagu ^c  

^a SUN YAT SEN UNIVERSITY   (China)

^b Wuhan Institute of Botany Chinese Academy of Sciences   (China)

^c SOUTH CHINA INSTITUTE OF BOTANY   (China)

Author keywords

Conservation management; Euryodendron excelsum; Genetic diversity

Indexed keywords

DNA MARKER; PRIMER DNA; REPETITIVE DNA;

ARTICLE; BAYES THEOREM; CHINA; CONTROLLED STUDY; DNA POLYMORPHISM; ENDANGERED SPECIES; ENDEMIC SPECIES; FAMILIA; GENE CLUSTER; GENE LOCUS; GENE SEQUENCE; GENETIC MARKER; GENETIC VARIABILITY; INTERSIMPLE SEQUENCE REPEAT; MOLECULAR PHYLOGENY; NONHUMAN; PHYLOGENETIC TREE; POPULATION GENETIC PARAMETERS; SEQUENCE HOMOLOGY; SPECIES COMPARISON; THEACEAE;

BAYES THEOREM; CHINA; CONSERVATION OF NATURAL RESOURCES; DNA, PLANT; GENETIC MARKERS; GENETIC VARIATION; SEQUENCE ANALYSIS, DNA; THEACEAE;

EURYODENDRON EXCELSUM; TERNSTROEMIACEAE; THEACEAE;

EID: 60449112375     PISSN: 00062928     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10528-008-9206-2     Document Type: Article

References (41)

1. RP Adams AE Schwarzbach RN Pandey 2003 The concordance of terpenoid, ISSR and RAPD markers, and ITS sequence data sets among genotypes: an example from Juniperus Biochem Syst Ecol 31 375 387
2. AA Anderberg C Rydin M Källerjö 2002 Phylogenetic relationships in the order Ericales s.1. analyses of molecular data from five genes from the plastid and mitochondrial genomes Am J Bot 89 677 687
3. S Barth AE Melchinger TL Lubberstedt 2002 Genetic diversity in Arabidopsis thaliana L. Heynh. investigated by cleaved amplified polymorphic sequence (CAPS) and inter-simple sequence repeat (ISSR) markers Mol Ecol 11 495 505
4. XY Bin SQ Tang JY Zhou HT Song ZY Li 2005 ISSR analysis on genetic diversity of Camellia nitidissima Chi (Theaceae) in China J Wuhan Bot Res 23 20 26
5. FJ Camacho A Liston 2001 Population structure and genetic diversity of Botrychium pumicola (Ophioglossaceae) based on inter-simple sequence repeats (ISSR) Am J Bot 88 1065 1070
6. PJ Cao QF Yao BY Ding HY Zeng YX Zhong CX Fu XF Jin 2006 Genetic diversity of Sinojackia dolichocarpa (Styracaceae), a species endangered and endemic to China, detected by inter-simple sequence repeat (ISSR) Biochem Syst Ecol 34 231 239
7. HT Chang 1963 A new genus of Theaceae Euryodendron Acta Sci Nat Univ Sunyatseni 4 126 130
8. Chang HT (1981) Systematic studies on the genus of Camellia. Zhongshan (Sun Yat-sen) University Press, Guangzhou
9. Chang HT (1998) Flora reipublicae popularis sinicae (Tomus 49). Science Press, Beijing
10. AU Deshpande GS Apte RA Bahulikar MD Lagu BG Kulkarni HS Suresh NP Singh MKV Rao VS Gupta A Pant PK Ranjekar 2001 Genetic diversity across natural populations of three montane plant species from the Western Ghats, India revealed by intersimple sequence repeats Mol Ecol 10 2397 2408
11. NC Ellstrand DR Elam 1993 Population genetic consequences of small population size: implications for plant conservation Annu Rev Ecol Syst 24 217 242
12. Frankham R, Ballou JD, Briscoe DA (2004) A primer of conservation genetics. Cambridge University Press, Cambridge, UK
13. Fu LG (1989) The rare and endangered plants in China. Shanghai Education Press, Shanghai
14. Fu LG, Jin JM (1992) Red list of endangered plants in China, vol 1. Science Press, Beijing
15. XJ Ge M Sun 1999 Reproductive biology and genetic diversity of a crytoviparous mangrove Aegiceras corniculatum (Myrsinaceae) using allozyme and intersimple sequence repeat (ISSR) analysis Mol Ecol 8 2061 2069
16. PW Hedrick 1985 Elephant seals and the estimation of a population bottleneck J Hered 86 232 235
17. KE Holsinger PO Lewis DK Dey 2002 A Bayesian approach to inferring population structure from dominant markers Mol Ecol 11 1157 1164
18. KE Holsinger LE Wallace 2004 Bayesian approaches for the analysis of population genetic structure: an example from Platanthera leucophaea (Orchidaceae) Mol Ecol 13 887 894
19. RA King RJ Gornall CD Preston JM Croft 2002 Population differentiation of Potamogeton pectinatus in the Baltic Sea with reference to waterfowl dispersal Mol Ecol 11 1947 1956
20. JA Lai WC Yang JY Hsiao 2001 An assessment of genetic relationships in cultivated tea clones and native wild tea in Taiwan using RAPD and ISSR maskers Bot Bull Acad Sinica 42 93 100
21. RC Lewontin 1973 The apportionment of human diversity Evol Biol 6 381 398
22. XY Luo GD Tang H Xu XY Zhuang WJ Zheng M Zeng 2005 Genetic diversity of three endemic and endangered species of the family Theaceae in Guangdong China Biodivers Sci 13 112 121
23. DR Marshall ADH Brown 1975
24. TL Ming B Bartholomew 2007
25. T Nagaoka Y Ogihara 1997 Applicability of inter-simple sequence repeat polymorphisms in wheat for use as DNA markers in comparison to RFLP and RAPD markers Theor Appl Genet 94 597 602
26. C Palacios F Gonzalez-Candelas 1997 Lack of genetic variability in the rare and endangered Limonium cavanillesii (Plumbaginaceae) using RAPD markers Mol Ecol 6 671 675
27. XF Pang 1993 A brief history of biocoenosis in Nanling mountainous region Ecol Sci 12 21 33
28. LM Prince CR Parks 2001 Phylogenetic relationships of Theaceae inferred from chloroplast DNA sequence data Am J Bot 88 2309 2320
29. Rohlf FJ (1993) NTSYS: numerical taxonomy and multivariate analysis system, vol 1.8. Exeter Software, New York
30. YJ Su T Wang WD Yang JM Zhu 1998 DNA extraction and RAPD analysis of Podocarpus Acta Sci Nat Univ Sunyatseni 37 13 18
31. Y Tsumura K Ohba SH Strauss 1996 Diversity and inheritance of inter-simple sequence repeat polymorphisms in Douglas-fir (Pseudotsuga menziesii) and sugi (Cryptomeria japonica) Theor Appl Genet 93 40 45
32. T Wang YJ Su H Ye PY Ouyang Y Jiang YF Sun GP Chen F Deng HT Zhang 2005 Genetic differentiation and conservation of 14 surviving individuals of Euryodendron excelsum endemic to China Acta Sci Nat Univ Sunyatseni 44 68 71
33. YH Wang TL Min XL Hu LM Cao H He 2002 The ecological and reproduction characteristics of Euryodendron excelsum, a critically endangered plant from Theaceae Acta Bot Yunnanica 24 725 732
34. X Wei JQ Wei HL Cao F Li WH Ye 2005 Genetic diversity and differentiation of Camellia euphlebia (Theaceae) in Guangxi, China Ann Bot Fenn 42 365 370
35. AD Wolfe QY Xiang SR Kephart 1998 Assessing hybridization in natural populations of Penstemon (Scrophulariaceae) using hypervariable inter-simple sequence repeat (ISSR) bands Mol Ecol 7 1107 1126
36. CC Wu ZF Hsu CH Tsou 2007 Phylogeny and taxonomy of Eurya (Ternstroemiaceae) from Taiwan, as inferred from ITS sequence data Bot Stud 48 97 116
37. DW Xue XJ Ge G Hao CQ Zhang 2004 High genetic diversity in a rare, narrowly endemic primrose species: Primula interjacens by ISSR analysis Acta Bot Sin 46 163 1169
38. HG Ye FG Wang LX Zhou YS Ye S Huang 2002 Euryodendron excelsum, an endangered plant in Theaceae Chin J Bot 4 3
39. Yeh FC, Yang R (1999) PopGene (v. 1.31). Department of Renewable Resources, University of Alberta. http://www.ualberta.ca/-/fyeh
40. Ying JS, Zhang YL (1994) The endemic genera of seed plants of China. Science Press, Beijing
41. E Zietkiewicz A Rafalski D Labuda 1994 Genomic fingerprinting by simple sequence repeat (SSR) anchored polymerase chain reaction amplification Genomics 20 176 183