Snake venomics of the Siamese Russell's viper (Daboia russelli siamensis) - Relation to pharmacological activities

Journal of Proteomics

Volumn 72, Issue 2, 2009, Pages 256-269

  Risch, Michaela ^a   Georgieva, Dessislava ^b,c   von Bergen, Martin ^a   Jehmlich, Nico ^a   Genov, Nicolay ^c   Arni, Raghuvir K ^d   Betzel, Christian ^b  

^a HELMHOLTZ CENTRE FOR ENVIRONMENTAL RESEARCH UFZ   (Germany)

^b UNIVERSITY OF HAMBURG   (Germany)

^c INSTITUTE OF ORGANIC CHEMISTRY   (Bulgaria)

^d SÃO PAULO STATE UNIVERSITY UNESP   (Brazil)

Author keywords

2 D electrophoresis; Daboia russelli siamensis; Protein family; Proteome; Snake venom

Indexed keywords

ALKALINE PHOSPHATASE; AMINO ACID OXIDASE; BLOOD CLOTTING FACTOR; LECTIN; METALLOPROTEINASE; PHOSPHOLIPASE A2; PHOSPHOLIPASE A2S; PROTEOME; SERINE PROTEINASE; SNAKE VENOM; UNCLASSIFIED DRUG; VASCULOTROPIN;

ARTICLE; BLOOD CLOTTING; BLOOD CLOTTING DISORDER; CLINICAL FEATURE; CONTROLLED STUDY; CORRELATION ANALYSIS; DABOIA RUSSELLI SIAMENSIS; EDEMA; ELECTROPHORESIS; ENZYMATIC ASSAY; ENZYME ACTIVITY; HYPOTENSION; MASS SPECTROMETER; NEUROTOXICITY; NONHUMAN; PATHOLOGY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DEGRADATION; PROTEIN FAMILY; PROTEIN FUNCTION; PROTEOMICS; SNAKE; SNAKEBITE; TISSUE INJURY; TISSUE NECROSIS; VIPERA AMMODYTES; VIPERA AMMODYTES MERIDIONALIS;

AMINO ACID SEQUENCE; ANIMALS; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; FEMALE; LECTINS; MALE; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; PEPTIDES; PROTEINS; PROTEOMICS; RUSSELL'S VIPER; SNAKE BITES; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; VIPER VENOMS;

DABOIA RUSSELLII SIAMENSIS; SERPENTES; VIPERA AMMODYTES AMMODYTES; VIPERA AMMODYTES MERIDIONALIS; VIPERIDAE; VIPERINAE;

EID: 60249101032     PISSN: 18743919     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jprot.2009.01.006     Document Type: Article

References (61)

1. Woodhams B.J., Wilson S.E., Xin B.C., and Hutton R.A. Differences between the venoms of two sub-species of Russell's viper: Vipera russelli pulchella and Vipera russelli siamensis. Toxicon 28 (1990) 427-433
2. Tun-Pe, Aye-Aye-Myint, and May-Mya-Win. Humoral response following Russell's viper (Daboia russelli siamensis) bites in Myanmar. Toxicon 33 (1995) 373-377
3. Clemens R., Purkittayakamee S., Vanijanonta S., Nontprasert A., Bock H.L., Charoenlarp P., et al. Therapeutic effects of antivenom supplemented by antithrombin III in rats experimentally envenomated with Russell's viper (Daboia russelli siamensis) venom. Toxicon 33 (1995) 77-82
4. 2 from venom of the species. Toxicon 34 (1996) 99-109
5. Tsai I.-H., Tsai H.-Y., Wang Y.M., Tun-Pe, and Warrell D.A. Venom phospholipases of Russell's vipers from Myanmar and eastern India - cloning, characterization and phylogeographic analysis. Biochim Biophys Acta 1774 (2007) 1020-1028
6. Mukherjee A.K., Ghosal S.K., and Maity C.R. Some biochemical properties of Russell's viper (Daboia russelli) venom from Eastern India: correlation with clinical pathological manifestation in Russelli's viper bite. Toxicon 38 (2000) 163-175
7. Warrell D.A. Snake venom in science and clinical medicine. 1. Russell's viper: biology, venom and treatment of bites. Trans R Soc Trop Med Hyg 83 (1989) 732-740
8. Fry B.G., Wickramaratna J.C., Hodgson W.C., Alewood P.F., Kini R.M., Ho H., et al. Electrospray liquid chromatography/mass spectrometry fingerprinting of Acantophis (death adder) venoms: taxonomic and toxinological implications. Rapid Commun Mass Spectrom 16 (2002) 600-608
9. Fry B.G., Wüster W., Kini R.M., Brusic V., Khan A., Venkataraman D., et al. Molecular evolution and phylogeny of elapid snake venom three-finger toxins. J Mol Evol 57 (2003) 110-129
10. Fry B.G., Lumsden N.G., Wüster W., Wickramaratna J.C., Hodgson W.C., and Kini R.M. Isolation of a neurotoxin (α-colubritoxin) from a nonvenomous colubrid: evidence for early origin of venom in snakes. J Mol Evol 57 (2003) 446-452
11. Fry B.G., Wüster W., Ramjan S.F.R., Jackson T., Martelli P., and Kini R.M. Analysis of colubroidea snake venoms by liquid chromatography with mass spectrometry: evolutionary and toxinological implications. Rapid Commun Mass Spectrom 17 (2003) 2047-2062
12. Fry B.G., and Wüster W. Assembling an arsenal: origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences. Mol Biol Evol 21 (2004) 870-883
13. Fry B.G. From genome to "venome": molecular origin and evolution of the snake venom proteome inferred from phylogenetic analysis of toxin sequences and related body proteins. Genome Res 15 (2005) 403-420
14. Fry B.G., Vidal N., Norman J.A., Vonk F.J., Scheib H., Rayan Ramjan S.F., et al. Early evolution of the venom system in lizards and snakes. Nature (2005) doi: 10.138/nature04328
15. Fox J.W., and Serrano S.M.T. Exploring snake venom proteomes: multifaceted analyses for complex toxin mixtures. Proteomics 8 (2008) 909-920
16. Serrano S.M.T., Shannon J.D., Wang D., Camargo A.C.M., and Fox J.W. A multifaceted analysis of viperid snake venoms by two-dimensional gel electrophoresis: an approach to understanding venom proteomics. Proteomics 5 (2005) 501-510
17. Calvete J.J., Marcinkiewicz C., and Sanz L. Snake venomics of Bitis gabonica gabonica. Protein family composition, subunit organization of venom toxins, and characterization of dimeric disintegrins Bitisgabonin-1 and Bitisgabonin-2. J Proteome Res 6 (2007) 326-336
18. Calvete J.J., Escolano J., and Sanz L. Snake venomics of Bitis species reveals large intragenus venom toxin composition variation: application to taxonomy of congeneric taxa. J Proteome Res 6 (2007) 2732-2745
19. Bazaa A., Marrakchi N., El Ayeb M., Sanz L., and Calvete J.J. Snake venomics: comparative analysis of the venom proteomes of the Tunisian snakes Cerastes cerastes, Cerastes vipera and Macrovipera lebetina. Proteomics 5 (2005) 4223-4235
20. Sanz L., Gibbs H.L., Mackessy S.P., and Calvete J.J. Venom proteomes of closely related Sistrurus rattlesnakes with divergent diets. J Proteome Res 5 (2006) 2098-2112
21. Lomonte B., Escolano J., Fernandez J., Sanz L., Angulo Y., Gutierrez J.M., et al. Snake venomics of the abroreal neotropical pitvipers Bothriechis lateralis and Bothriechis schlegelii. J Proteome Res 7 (2008) 2445-2457
22. Gutierrez J.M., Sanz L., Escolano J., Fernandez J., Lomonte B., Angulo Y., et al. Snake venomics of the Lesser Antillean pit vipers Bothrops caribbaeus and Bothrops lanceolatus: correlation with toxicological activities and immunoreactivity of a heterologous antivenom. J Proteome Res 7 (2008) 4396-4408
23. Angulo Y., Escolano J., Lomonte B., Gutierrez J.M., Sanz L., and Calvete J.J. Snake venomics of Central American pitvipers: clues for rationalizing the distinct envenomation profiles of Artropoides nummifer and Atropoides picadoi. J Proteome Res 7 (2008) 708-719
24. Alape-Giron A., Sanz L., Escolano J., Florez-Diaz M., Madrigal M., Sasa M., et al. Snake venomics of the lancehead pitviper Bothrops asper. Geographic, individual, and ontogenetic variations. J Proteome Res 7 (2008) 3556-3571
25. Tashima A.K., Sanz L., Camargo A.C.M., Serrano S.M.T., and Calvete J.J. Snake venomics of the Brazilian pitvipers Bothrops cotiara and Bothrops fonsecai. Identification of taxonomy markers. J Proteomics 71 (2008) 473-485
26. Sanz L., Ayvazyan N., and Calvete J.J. Snake venomics of the Armenian mountain vipers Macrovipera lebetina obtuse and Vipera raddei. J Proteomics 71 (2008) 198-209
27. Sanz L., Escolano J., Ferretti M., Biscoglio M.J., Rivera E., Crescenti E.J., et al. Snake venomics of the South and Central American Bushmasters. Comparison of the toxin composition of Lachesis muta gathered from proteomic versus transcriptomic analysis. J Proteomics 71 (2008) 46-60
28. Benndorf D., Müller A., Bock K., Manuwald O., Herbarth O., and von Bergen M. Identification of spore allergens from the indoor mould Aspergillus versicolor. Allergy 63 (2008) 454-460
29. Benndorf D., Balcke G.U., Harms H., and von Bergen M. Functional metaproteome analysis of protein extracts from contaminated soil and groundwater. ISME J 1 (2007) 224-234
30. Jehmlich N., Schmidt F., von Bergen M., Richnow H.H., and Vogt C. Protein-based stable isotope probing (Protein-SIP) reveals active species within anoxic mixed cultures. ISME J 2 (2008) 1122-1133
31. Johnson A.J., Kline D.L., and Alkjaersig N. Assay methods and standard preparations for plasmin, plasminogen and urokinase in purified systems. Thromb Diath Haemorrh 21 (1969) 259-272
32. Wellner D., and Lichtenberg L.A. Assay of amino acid oxidase. In: Tabor H., and Tabor C.W. (Eds). Methods in Enzymology vol. 17 (1971), Academic Press, New York-London 592-596 part B
33. Sulkowski E., Björk W., and Laskowski M. A specific and nonspecific alkaline monophosphatase in the venom of Bothrops atrox and their occurrence in the purified venom phosphodiesterase. J Biol Chem 238 (1963) 2477-2486
34. Tu A.T., and Chua A. Acid and alkaline phosphomonoesterase activities in snake venoms. Comp Biochem Physiol 17 (1966) 297-307
35. Segers K., Rosing J., and Nicolaes G.A.F. Structural models of the snake venom factor V activators from Daboia russelli and Daboia lebetina. Proteins: Structure, Function, and Bioinformatics 64 (2006) 968-984
36. Nicolaes G.A., and Dahlback B. Factor V and thrombotic disease: description of a Janus-faced protein. Arterioscler Thromb Vasc Biol 22 (2002) 530-538
37. Matsui T., Sakurai Y., Fujimura Y., Hayashi I., Oh-Ishi S., Suzuki M., et al. Purification and amino acid sequence of halystase from snake venom of Agkistrodon halys blomhoffii, a serine protease that cleaves specifically fibrinogen and kininogen. Eur J Biochem 252 (1998) 569-575
38. Siigur E., Aaspolu A., and Siigur J. Anticoagulant serine fibrinogenases from Vipera lebetina venom: structure-function relationships. Thromb Haemost 89 (2003) 826-831
39. Takeya H., Nishida S., Miyata T., Kawada S.I., Saisaka Y., Morita T., et al. Coagulation factor X activating enzyme from Russell's viper venom (RVV-X). J Biol Chem 267 (1992) 14109-14117
40. Mizuno H., Fujimoto Z., Atoda H., and Morita T. Crystal structure of an anticoagulant protein in complex with the Gla domain of factor X. Proc Natl Acad Sci USA 98 (2001) 7230-7234
41. Takeda S., Igarashi T., and Mori H. Crystal structure of RVV-X: an example of evolutionary gain of specificity by ADAM proteinases. FEBS Lett 581 (2007) 5859-5864
42. Siigur E., Aaspõllu A., Trummal K., Tõnismägi K., Tammiste I., Kalkkinen N., et al. Factor X activator from Vipera lebetina venom is synthesized from different genes. Biochim Biophys Acta 1702 (2004) 41-51
43. Hung D.Z., Wu M.L., Deng J.F., and Lin-Shiau S.Y. Russell's viper snakebite in Taiwan: differences from other Asian countries. Toxicon 40 (2002) 1291-1298
44. Thwin M.M., Gopalakrishnakone P., Yuen R., and Tan C.H. A major lethal factor of the venom of Burmese Russell's viper (Daboia russelli siamensis): isolation, N-terminal sequencing and biological activities of daboiatoxin. Toxicon 33 (1995) 63-76
45. 2 from the venom of Ophiophagus Hannah (king cobra): a novel cobra venom enzyme with "pancreatic loop". Arch Biochem Biophys 338 (1997) 150-156
46. Kumar J.R., Basavarajappa B.S., Arancio O., Aranha I., Gangadhara N.S., Yajurvedi H.N., et al. Isolation and characterization of "Reprotoxin", a novel protein complex from Daboia russelli snake venom. Biochimie 90 (2008) 1545-1559
47. 2 from Taiwan viper (Vipera russelli formosensis). Eur J Biochem 209 (1992) 635-641
48. Georgieva D., Risch M., Kardas A., Buck F., von Bergen M., and Betzel C. Comparative analysis of the venom proteomes of Vipera ammodytes ammodytes and Vipera ammodytes meridionalis. J Proteome Res 7 (2008) 866-886
49. 2 from Vipera a. zinnikeri venom. Arch Biochem Biophys 327 (1996) 303-307
50. 2 activity generated by molecular evolution. Cell Mol Life Sci 56 (1999) 384-397
51. Banumathi S., Rajashankar K.R., Nötzel C., Alexsiev B., Singh T.P., Genov N., et al. Structure of the neurotoxic complex vipoxin at 1.4 Å resolution. Acta Cryst D57 (2001) 1552-1559
52. Perbandt M., Tsai I.-H., Fuchs A., Banumathi S., Rajashankar K.R., Georgieva D., et al. Structure of the heterodimeric neurotoxic complex viperotoxin F (RV4/RV7) from the venom of Vipera russelli formosensis at 1.9 Å resolution. Acta Cryst D59 (2003) 1679-1687
53. Mandal S., and Bhattacharyya D. Two L-amino acid oxidase isoenzymes from Russell's viper (Daboia russelli russelli) venom with different mechanisms of inhibition by substrate analogs. FEBS J 275 (2008) 2078-2095
54. Du X.-Y., and Clemetson K.J. Snake venom L-amino acid oxidases. Toxicon 40 (2002) 659-665
55. Lewis G.M., Minton S.A., and Slack J.H. Balb/c An B cell and T cells have distinct susceptibilities to cytotoxic effects of snake venom. Toxicon 28 (1990) 351-358
56. Tokunaga Y., Yamazaki Y., and Morita T. Specific distribution of VEGF-F in Viperinae snake venoms: isolation and characterization of a VEGF-F from the venom of Daboia russelli siamensis. Arch Biochem Biophys 439 (2005) 241-247
57. Ferrara N. Vascular endothelial growth factor: basic science and clinical progress. Endocrine Rev 25 (2004) 581-611
58. Morita T. Structure-function relationships of C-type lectin-related proteins. Pathophysiol Haemost Thromb 34 (2005) 156-159
59. Zhong S.-R., Jin Y., Wu J.B., Chen R.-Q., Jia Y.-H., Wang W.-Y., et al. Characterization and molecular cloning of dabocetin, a potent antiplatelet C-type lectin-like protein from Daboia russelli siamensis venom. Toxicon 47 (2006) 104-112
60. 2. Toxicon 27 (1989) 613-635
61. 2. Science 250 (1990) 1541-1546