-
1
-
-
0031008228
-
The ATP synthase - a splendid molecular machine
-
Boyer P.D. The ATP synthase - a splendid molecular machine. Annu. Rev. Biochem. 66 (1997) 717-749
-
(1997)
Annu. Rev. Biochem.
, vol.66
, pp. 717-749
-
-
Boyer, P.D.1
-
2
-
-
0032311441
-
ATP synthase - past and future
-
Boyer P.D. ATP synthase - past and future. Biochim. Biophys. Acta 1365 (1998) 3-9
-
(1998)
Biochim. Biophys. Acta
, vol.1365
, pp. 3-9
-
-
Boyer, P.D.1
-
3
-
-
59649126077
-
-
ATP Synthesis by Oxidative Phosphorylation
-
ATP Synthesis by Oxidative Phosphorylation.
-
-
-
-
4
-
-
33745713048
-
The peripheral stalk of the mitochondrial ATP synthase
-
Walker J.E., and Dickson V.K. The peripheral stalk of the mitochondrial ATP synthase. Biochim. Biophys. Acta 1757 (2006) 286-296
-
(2006)
Biochim. Biophys. Acta
, vol.1757
, pp. 286-296
-
-
Walker, J.E.1
Dickson, V.K.2
-
5
-
-
33748986212
-
ATP synthase: subunit-subunit interactions in the stator stalk
-
Weber J. ATP synthase: subunit-subunit interactions in the stator stalk. Biochim. Biophys. Acta 1757 (2006) 1162-1170
-
(2006)
Biochim. Biophys. Acta
, vol.1757
, pp. 1162-1170
-
-
Weber, J.1
-
6
-
-
33846658425
-
ATP synthase - the structure of the stator stalk
-
Weber J. ATP synthase - the structure of the stator stalk. Trends Biochem. Sci. 32 (2007) 53-56
-
(2007)
Trends Biochem. Sci.
, vol.32
, pp. 53-56
-
-
Weber, J.1
-
8
-
-
0345166868
-
Catalysis and rotation of F1 motor: cleavage of ATP at the catalytic site occurs in 1 ms before 40 degree substep rotation
-
Shimabukuro K., Yasuda R., Muneyuki E., Hara K.Y., Kinosita K.J., and Yoshida M. Catalysis and rotation of F1 motor: cleavage of ATP at the catalytic site occurs in 1 ms before 40 degree substep rotation. Proc. Natl. Acad. Sci. U. S. A. 100 (2003) 14731-14736
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 14731-14736
-
-
Shimabukuro, K.1
Yasuda, R.2
Muneyuki, E.3
Hara, K.Y.4
Kinosita, K.J.5
Yoshida, M.6
-
10
-
-
0035912221
-
Resolution of distinct rotational substeps by submillisecond kinetic analysis of F1-ATPase
-
Yasuda R., Noji H., Yoshida M., Kinosita K.J., and Itoh H. Resolution of distinct rotational substeps by submillisecond kinetic analysis of F1-ATPase. Nature 410 (2001) 898-904
-
(2001)
Nature
, vol.410
, pp. 898-904
-
-
Yasuda, R.1
Noji, H.2
Yoshida, M.3
Kinosita, K.J.4
Itoh, H.5
-
11
-
-
0034859197
-
Viscoelastic dynamics of actin filaments coupled to rotary F-ATPase: curvature as an indicator of the torque
-
Cherepanov D.A., and Junge W. Viscoelastic dynamics of actin filaments coupled to rotary F-ATPase: curvature as an indicator of the torque. Biophys. J. 81 (2001) 1234-1244
-
(2001)
Biophys. J.
, vol.81
, pp. 1234-1244
-
-
Cherepanov, D.A.1
Junge, W.2
-
12
-
-
0035979760
-
Inter-subunit rotation and elastic power transmission in F0F1-ATPase
-
Junge W., Pänke O., Cherepanov D.A., Gumbiowski K., Müller M., and Engelbrecht S. Inter-subunit rotation and elastic power transmission in F0F1-ATPase. FEBS Lett. 504 (2001) 152-160
-
(2001)
FEBS Lett.
, vol.504
, pp. 152-160
-
-
Junge, W.1
Pänke, O.2
Cherepanov, D.A.3
Gumbiowski, K.4
Müller, M.5
Engelbrecht, S.6
-
13
-
-
4344715981
-
Solution structure of subunit F(6) from the peripheral stalk region of ATP synthase from bovine heart mitochondria
-
Carbajo R.J., Silvester J.A., Runswick M.J., Walker J.E., and Neuhaus D. Solution structure of subunit F(6) from the peripheral stalk region of ATP synthase from bovine heart mitochondria. J. Mol. Biol. 342 (2004) 593-603
-
(2004)
J. Mol. Biol.
, vol.342
, pp. 593-603
-
-
Carbajo, R.J.1
Silvester, J.A.2
Runswick, M.J.3
Walker, J.E.4
Neuhaus, D.5
-
14
-
-
23444432514
-
Structure of the F1-binding domain of the stator of bovine F1Fo-ATPase and how it binds an alpha-subunit
-
Carbajo R.J., Kellas F.A., Runswick M.J., Montgomery M.G., Walker J.E., and Neuhaus D. Structure of the F1-binding domain of the stator of bovine F1Fo-ATPase and how it binds an alpha-subunit. J. Mol. Biol. 351 (2005) 824-838
-
(2005)
J. Mol. Biol.
, vol.351
, pp. 824-838
-
-
Carbajo, R.J.1
Kellas, F.A.2
Runswick, M.J.3
Montgomery, M.G.4
Walker, J.E.5
Neuhaus, D.6
-
17
-
-
0033579431
-
Lengthening the second stalk of F(1)F(0) ATP synthase in Escherichia coli
-
Sorgen P.L., Bubb M.R., and Cain B.D. Lengthening the second stalk of F(1)F(0) ATP synthase in Escherichia coli. J. Biol. Chem. 274 (1999) 36261-36266
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 36261-36266
-
-
Sorgen, P.L.1
Bubb, M.R.2
Cain, B.D.3
-
21
-
-
0037188394
-
The "second stalk" of Escherichia coli ATP synthase: structure of the isolated dimerization domain
-
Del Rizzo P.A., Bi Y., Dunn S.D., and Shilton B.H. The "second stalk" of Escherichia coli ATP synthase: structure of the isolated dimerization domain. Biochemistry 41 (2002) 6875-6884
-
(2002)
Biochemistry
, vol.41
, pp. 6875-6884
-
-
Del Rizzo, P.A.1
Bi, Y.2
Dunn, S.D.3
Shilton, B.H.4
-
22
-
-
0030960276
-
Predicting coiled-coil regions in proteins
-
Lupas A. Predicting coiled-coil regions in proteins. Curr. Opin. Struct. Biol. 7 (1997) 388-393
-
(1997)
Curr. Opin. Struct. Biol.
, vol.7
, pp. 388-393
-
-
Lupas, A.1
-
23
-
-
33750951013
-
ATP synthase b subunit dimerization domain: a right-handed coiled coil with offset helices
-
Del Rizzo P.A., Bi Y., and Dunn S.D. ATP synthase b subunit dimerization domain: a right-handed coiled coil with offset helices. J. Mol. Biol. 364 (2006) 735-746
-
(2006)
J. Mol. Biol.
, vol.364
, pp. 735-746
-
-
Del Rizzo, P.A.1
Bi, Y.2
Dunn, S.D.3
-
24
-
-
36148937536
-
Role of the asymmetry of the homodimeric b2 stator stalk in the interaction with the F1 sector of Escherichia coli ATP synthase
-
Wood K.S., and Dunn S.D. Role of the asymmetry of the homodimeric b2 stator stalk in the interaction with the F1 sector of Escherichia coli ATP synthase. J. Biol. Chem. 282 (2007) 31920-31927
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 31920-31927
-
-
Wood, K.S.1
Dunn, S.D.2
-
26
-
-
45849087668
-
Subunit b-dimer of the Escherichia coli ATP synthase can form left-handed coiled-coils
-
Wise J.G., and Vogel P.D. Subunit b-dimer of the Escherichia coli ATP synthase can form left-handed coiled-coils. Biophys. J. 94 (2008) 5040-5052
-
(2008)
Biophys. J.
, vol.94
, pp. 5040-5052
-
-
Wise, J.G.1
Vogel, P.D.2
-
27
-
-
0000920828
-
The packing of alpha-helices: simple coiled-coils
-
Crick F.H.C. The packing of alpha-helices: simple coiled-coils. Acta Cryst. 6 (1953) 689-697
-
(1953)
Acta Cryst.
, vol.6
, pp. 689-697
-
-
Crick, F.H.C.1
-
28
-
-
0035830452
-
Specific heterodimer formation by the cytoplasmic domains of the b and b′ subunits of cyanobacterial ATP synthase
-
Dunn S.D., Kellner E., and Lill H. Specific heterodimer formation by the cytoplasmic domains of the b and b′ subunits of cyanobacterial ATP synthase. Biochemistry 40 (2001) 187-192
-
(2001)
Biochemistry
, vol.40
, pp. 187-192
-
-
Dunn, S.D.1
Kellner, E.2
Lill, H.3
-
29
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1976) 248-254
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
30
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227 (1970) 680-685
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
31
-
-
33646127590
-
Dipolar coupling between nitroxide spin labels: the development and application of a tether-in-a-cone model
-
Hustedt E.J., Stein R.A., Sethaphong L., Brandon S., Zhou Z., and Desensi S.C. Dipolar coupling between nitroxide spin labels: the development and application of a tether-in-a-cone model. Biophys. J. 90 (2006) 340-356
-
(2006)
Biophys. J.
, vol.90
, pp. 340-356
-
-
Hustedt, E.J.1
Stein, R.A.2
Sethaphong, L.3
Brandon, S.4
Zhou, Z.5
Desensi, S.C.6
-
32
-
-
0030781782
-
Determination of interspin distances between spin labels attached to insulin: comparison of electron paramagnetic resonance data with the X-ray structure
-
Steinhoff H.J., Radzwill N., Thevis W., Lenz V., Brandenburg D., Antson A., Dodson G., and Wollmer A. Determination of interspin distances between spin labels attached to insulin: comparison of electron paramagnetic resonance data with the X-ray structure. Biophys. J. 73 (1997) 3287-3298
-
(1997)
Biophys. J.
, vol.73
, pp. 3287-3298
-
-
Steinhoff, H.J.1
Radzwill, N.2
Thevis, W.3
Lenz, V.4
Brandenburg, D.5
Antson, A.6
Dodson, G.7
Wollmer, A.8
-
33
-
-
0029115328
-
Determination of the distance between two spin labels attached to a macromolecule
-
Rabenstein M.D., and Shin Y.K. Determination of the distance between two spin labels attached to a macromolecule. Proc. Natl. Acad. Sci. U. S. A. 92 (1995) 8239-8243
-
(1995)
Proc. Natl. Acad. Sci. U. S. A.
, vol.92
, pp. 8239-8243
-
-
Rabenstein, M.D.1
Shin, Y.K.2
-
34
-
-
0035983171
-
Structural determination of spin label immobilization and orientation: a Monte Carlo minimization approach
-
Sale K., Sár C., Sharp K.A., Hideg K., and Fajer P.G. Structural determination of spin label immobilization and orientation: a Monte Carlo minimization approach. J. Magn. Reson. 156 (2002) 104-112
-
(2002)
J. Magn. Reson.
, vol.156
, pp. 104-112
-
-
Sale, K.1
Sár, C.2
Sharp, K.A.3
Hideg, K.4
Fajer, P.G.5
-
36
-
-
0030987407
-
MultiCoil: a program for predicting two- and three-stranded coiled coils
-
Wolf E., Kim P.S., and Berger B. MultiCoil: a program for predicting two- and three-stranded coiled coils. Protein Sci. 6 (1997) 1179-1189
-
(1997)
Protein Sci.
, vol.6
, pp. 1179-1189
-
-
Wolf, E.1
Kim, P.S.2
Berger, B.3
-
37
-
-
0029878720
-
-
Humphrey W, Dalke A & Schulten K. VMD: visual molecular dynamics. J. Mol. Graph. (1996) 14: p. 33-8, 27-8.
-
Humphrey W, Dalke A & Schulten K. VMD: visual molecular dynamics. J. Mol. Graph. (1996) 14: p. 33-8, 27-8.
-
-
-
-
38
-
-
0003885069
-
-
Addison-Wesley Professional, Upper Saddle River, NJ
-
Ousterhout J. Tcl and t he Tk Toolkit. Addison-Wesley Professional, Upper Saddle River, NJ, 1994.
-
(1994)
Tcl and t he Tk Toolkit
-
-
Ousterhout, J.1
-
39
-
-
0033397980
-
Python: a programming language for software integration and development
-
Sanner M.F. Python: a programming language for software integration and development. J. Mol. Graph. Model. 17 (1999) 57-61
-
(1999)
J. Mol. Graph. Model.
, vol.17
, pp. 57-61
-
-
Sanner, M.F.1
-
40
-
-
0034653908
-
The coiled-coil trigger site of the rod domain of cortexillin I unveils a distinct network of interhelical and intrahelical salt bridges
-
Burkhard P., Kammerer R.A., Steinmetz M.O., Bourenkov G.P., and Aebi U. The coiled-coil trigger site of the rod domain of cortexillin I unveils a distinct network of interhelical and intrahelical salt bridges. Structure 8 (2000) 223-230
-
(2000)
Structure
, vol.8
, pp. 223-230
-
-
Burkhard, P.1
Kammerer, R.A.2
Steinmetz, M.O.3
Bourenkov, G.P.4
Aebi, U.5
-
41
-
-
0001708879
-
Sampling properties of simulated annealing and distance geometry
-
Hoch J.C., Poulsen F.M., and Redfield C. (Eds)
-
Nilges M., Kuszewski J., and Brünger A.T. Sampling properties of simulated annealing and distance geometry. In: Hoch J.C., Poulsen F.M., and Redfield C. (Eds). Computational Aspects of the Study of Biological Macromolecules by NMR (1991) 451-455
-
(1991)
Computational Aspects of the Study of Biological Macromolecules by NMR
, pp. 451-455
-
-
Nilges, M.1
Kuszewski, J.2
Brünger, A.T.3
-
43
-
-
0030339738
-
AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR
-
Laskowski R.A., Rullmannn J.A., MacArthur M.W., Kaptein R., and Thornton J.M. AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR. J. Biomol. NMR 8 (1996) 477-486
-
(1996)
J. Biomol. NMR
, vol.8
, pp. 477-486
-
-
Laskowski, R.A.1
Rullmannn, J.A.2
MacArthur, M.W.3
Kaptein, R.4
Thornton, J.M.5
-
44
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
45
-
-
0029957901
-
Heptad breaks in alpha-helical coiled coils: stutters and stammers
-
Brown J.H., Cohen C., and Parry D.A. Heptad breaks in alpha-helical coiled coils: stutters and stammers. Proteins 26 (1996) 134-145
-
(1996)
Proteins
, vol.26
, pp. 134-145
-
-
Brown, J.H.1
Cohen, C.2
Parry, D.A.3
-
46
-
-
46349105337
-
Probing the functional tolerance of the b subunit of Escherichia coli ATP synthase for sequence manipulation through a chimera approach
-
(in press)
-
Bi Y., Watts J.C., Bamford P.K., Briere L.K., and Dunn S.D. Probing the functional tolerance of the b subunit of Escherichia coli ATP synthase for sequence manipulation through a chimera approach. Biochim. Biophys. Acta (2008) (in press)
-
(2008)
Biochim. Biophys. Acta
-
-
Bi, Y.1
Watts, J.C.2
Bamford, P.K.3
Briere, L.K.4
Dunn, S.D.5
-
48
-
-
0029889988
-
PHD: predicting one-dimensional protein structure by profile-based neural networks
-
Rost B. PHD: predicting one-dimensional protein structure by profile-based neural networks. Methods Enzymol. 266 (1996) 525-539
-
(1996)
Methods Enzymol.
, vol.266
, pp. 525-539
-
-
Rost, B.1
|