Genome-wide enzyme annotation with precision control: Catalytic families (CatFam) databases

Proteins: Structure, Function and Bioinformatics

Volumn 74, Issue 2, 2009, Pages 449-460

  Yu, Chenggang ^a   Zavaljevski, Nela ^a   Desai, Valmik ^a   Reifman, Jaques ^a  

^a U S ARMY MEDICAL RESEARCH AND MATERIEL COMMAND   (United States)

Author keywords

Automated annotation; Catalytic function; Enzyme commission number; Profile method; Protein function prediction

Indexed keywords

BACTERIAL ENZYME; CYCLIC AMP DEPENDENT PROTEIN KINASE; ENZYME; GLUCOKINASE; GLYCEROL 3 PHOSPHATE DEHYDROGENASE; LACTATE DEHYDROGENASE; PROTEIN; PROTEIN SERINE THREONINE KINASE; PROTEIN TYROSINE KINASE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE DEHYDROGENASE; RIBONUCLEASE; RNA DIRECTED DNA POLYMERASE; STARCH SYNTHASE;

ACCURACY; ALGORITHM; ARTICLE; BACTERIAL GENOME; CATALYSIS; CATFAM DATABASE; COMPUTER PROGRAM; ENZYME ACTIVITY; FALSE POSITIVE RESULT; FRANCISELLA TULARENSIS; GENBANK; GENOME; HUMAN; NONHUMAN; PREDICTION; PRIORITY JOURNAL; PROTEIN DATABASE; PROTEIN FUNCTION; RECALL; SWISS-PROT; YERSINIA PESTIS; ANIMAL; CLUSTER ANALYSIS; COMPARATIVE STUDY; EVALUATION; GENETICS; METABOLISM; METHODOLOGY; PROTEIN TERTIARY STRUCTURE; REPRODUCIBILITY; SEQUENCE ANALYSIS; STRUCTURE ACTIVITY RELATION;

BACTERIA (MICROORGANISMS);

ALGORITHMS; ANIMALS; CATALYSIS; CLUSTER ANALYSIS; DATABASES, PROTEIN; ENZYMES; GENOME; HUMANS; METABOLIC NETWORKS AND PATHWAYS; PROTEIN STRUCTURE, TERTIARY; PROTEINS; REPRODUCIBILITY OF RESULTS; SEQUENCE ANALYSIS, PROTEIN; STRUCTURE-ACTIVITY RELATIONSHIP;

EID: 59449104222     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.22167     Document Type: Article

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