메뉴 건너뛰기




Volumn 8, Issue , 2007, Pages

A survey of orphan enzyme activities

Author keywords

[No Author keywords available]

Indexed keywords

DATABASE SEARCHES; ENZYME COMMISSIONS; GENE SEQUENCES; GENOMICS; SEQUENCE DATA; SEQUENCE DATABASE;

EID: 34547852439     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-244     Document Type: Article
Times cited : (35)

References (36)
  • 1
    • 19344377263 scopus 로고    scopus 로고
    • Identifying protein function-a call for community action
    • 368155 15024411 10.1371/journal.pbio.0020042
    • Roberts RJ Identifying protein function-a call for community action PLoS Biol 2004 2 3 E42 368155 15024411 10.1371/journal.pbio.0020042
    • (2004) PLoS Biol , vol.2
    • Roberts, R.J.1
  • 2
    • 6044244615 scopus 로고    scopus 로고
    • 'Conserved hypothetical' proteins: Prioritization of targets for experimental study
    • 524295 15479782 10.1093/nar/gkh885
    • Galperin MY Koonin EV 'Conserved hypothetical' proteins: Prioritization of targets for experimental study Nucl Acids Res 2004 32 18 5452-5463 524295 15479782 10.1093/nar/gkh885
    • (2004) Nucl Acids Res , vol.32 , Issue.18 , pp. 5452-5463
    • Galperin, M.Y.1    Koonin, E.V.2
  • 3
    • 19244366327 scopus 로고    scopus 로고
    • Call for an enzyme genomics initiative
    • 507876 15287973 10.1186/gb-2004-5-8-401
    • Karp P Call for an enzyme genomics initiative Genome Biology 2004 5 8 401 507876 15287973 10.1186/gb-2004-5-8-401
    • (2004) Genome Biology , vol.5 , Issue.8 , pp. 401
    • Karp, P.1
  • 4
    • 13744256137 scopus 로고    scopus 로고
    • Orphan enzymes?
    • 10.1126/science.307.5706.42a
    • Lespinet O Labedan B Orphan enzymes? Science 2005 307 5706 42a 10.1126/ science.307.5706.42a
    • (2005) Science , vol.307 , Issue.5706
    • Lespinet, O.1    Labedan, B.2
  • 5
    • 0031572945 scopus 로고    scopus 로고
    • Enzyme Nomenclature. Recommendations 1992. Supplement 4: Corrections and additions (1997)
    • Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB). 10.1111/j.1432-1033.1997.001_1.x 9431984
    • Barrett A Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB). Enzyme Nomenclature. Recommendations 1992. Supplement 4: Corrections and additions (1997) Eur J Biochem 1997 250 1 1-6 10.1111/j.1432-1033.1997.001_1.x 9431984
    • (1997) Eur J Biochem , vol.250 , Issue.1 , pp. 1-6
    • Barrett, A.1
  • 6
    • 33750267965 scopus 로고    scopus 로고
    • ORENZA: A web resource for studying ORphan ENZyme activities
    • 1609188 17026747 10.1186/1471-2105-7-436
    • Lespinet O Labedan B ORENZA: A web resource for studying ORphan ENZyme activities BMC Bioinformatics 2006 7 436 1609188 17026747 10.1186/ 1471-2105-7-436
    • (2006) BMC Bioinformatics , vol.7 , pp. 436
    • Lespinet, O.1    Labedan, B.2
  • 7
    • 33645895566 scopus 로고    scopus 로고
    • Orphan enzymes could be an unexplored reservoir of new drug targets
    • 10.1016/j.drudis.2006.02.002 16580971
    • Lespinet O Labedan B Orphan enzymes could be an unexplored reservoir of new drug targets Drug Discov Today 2006 11 7-8 300-305 10.1016/ j.drudis.2006.02.002 16580971
    • (2006) Drug Discov Today , vol.11 , Issue.7-8 , pp. 300-305
    • Lespinet, O.1    Labedan, B.2
  • 9
    • 84886759082 scopus 로고    scopus 로고
    • Enzyme Genomics Site http://bioinformatics.ai.sri.com/enzyme-genomics
  • 10
    • 33746781022 scopus 로고    scopus 로고
    • Identification and characterization of a lysophosphatidylcholine acyltransferase in alveolar type II cells
    • 1544237 16864775 10.1073/pnas.0604946103
    • Chen X Hyatt BA Mucenski ML Mason RJ Shannon JM Identification and characterization of a lysophosphatidylcholine acyltransferase in alveolar type II cells Proc Natl Acad Sci USA 2006 103 31 11724-11729 1544237 16864775 10.1073/pnas.0604946103
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.31 , pp. 11724-11729
    • Chen, X.1    Hyatt, B.A.2    Mucenski, M.L.3    Mason, R.J.4    Shannon, J.M.5
  • 11
    • 14844326483 scopus 로고    scopus 로고
    • Computational prediction of human metabolic pathways from the complete human genome
    • 549063 15642094 10.1186/gb-2004-6-1-r2
    • Romero P Wagg J Green ML Kaiser D Krummenacker M Karp PD Computational prediction of human metabolic pathways from the complete human genome Genome Biol 2005 6 1 R2 549063 15642094 10.1186/gb-2004-6-1-r2
    • (2005) Genome Biol , vol.6 , Issue.1
    • Romero, P.1    Wagg, J.2    Green, M.L.3    Kaiser, D.4    Krummenacker, M.5    Karp, P.D.6
  • 12
    • 0031897589 scopus 로고    scopus 로고
    • Predicting functions from protein sequences-where are the bottlenecks?
    • 10.1038/ng0498-313 9537411
    • Bork P Koonin E Predicting functions from protein sequences-where are the bottlenecks? Nature Genetics 1998 18 4 313-318 10.1038/ng0498-313 9537411
    • (1998) Nature Genetics , vol.18 , Issue.4 , pp. 313-318
    • Bork, P.1    Koonin, E.2
  • 13
    • 0031797096 scopus 로고    scopus 로고
    • What we do not know about sequence analysis and sequence databases
    • 10.1093/bioinformatics/14.9.753 10366280
    • Karp PD What we do not know about sequence analysis and sequence databases Bioinformatics 1998 14 9 753-754 10.1093/bioinformatics/ 14.9.753 10366280
    • (1998) Bioinformatics , vol.14 , Issue.9 , pp. 753-754
    • Karp, P.D.1
  • 14
    • 0033569629 scopus 로고    scopus 로고
    • Keeping Genome Databases Clean and Up to Date
    • 10.1126/science.286.5439.447 10577208
    • Pennisi E Keeping Genome Databases Clean and Up to Date Science 1999 286 5439 447-450 10.1126/science.286.5439.447 10577208
    • (1999) Science , vol.286 , Issue.5439 , pp. 447-450
    • Pennisi, E.1
  • 15
    • 9144265895 scopus 로고    scopus 로고
    • Retrieving sequences of enzymes experimentally characterized but erroneously annotated: The case of the putrescine carbamoyltransferase
    • 514541 15287962 10.1186/1471-2164-5-52
    • Naumoff D Xu Y Glansdorff N Labedan B Retrieving sequences of enzymes experimentally characterized but erroneously annotated: The case of the putrescine carbamoyltransferase BMC Genomics 2004 5 1 52 514541 15287962 10.1186/1471-2164-5-52
    • (2004) BMC Genomics , vol.5 , Issue.1 , pp. 52
    • Naumoff, D.1    Xu, Y.2    Glansdorff, N.3    Labedan, B.4
  • 16
    • 33645049066 scopus 로고    scopus 로고
    • Puzzling over orphan enzymes
    • 10.1007/s00018-005-5520-6 16465439
    • Lespinet O Labedan B Puzzling over orphan enzymes Cell Mol Life Sci 2006 63 5 517-523 10.1007/s00018-005-5520-6 16465439
    • (2006) Cell Mol Life Sci , vol.63 , Issue.5 , pp. 517-523
    • Lespinet, O.1    Labedan, B.2
  • 18
    • 84886755478 scopus 로고    scopus 로고
    • EcoCyc orphan page http://ecocyc.org/enzymes.shtml
  • 20
    • 84886766738 scopus 로고    scopus 로고
    • ORENZA http://www.orenza.u-psud.fr
  • 21
    • 2442681699 scopus 로고    scopus 로고
    • Identification of the two missing bacterial genes involved in thiamine salvage: Thiamine pyrophosphokinase and thiamine kinase
    • 415752 15150256 10.1128/JB.186.11.3660-3662.2004
    • Melnick J Lis E Park J-H Kinsland C Mori H Baba T Perkins J Schyns G Vassieva O Osterman A Begley TP Identification of the two missing bacterial genes involved in thiamine salvage: Thiamine pyrophosphokinase and thiamine kinase J Bacteriol 2004 186 11 3660-3662 415752 15150256 10.1128/JB.186.11.3660-3662.2004
    • (2004) J Bacteriol , vol.186 , Issue.11 , pp. 3660-3662
    • Melnick, J.1    Lis, E.2    Park, J.-H.3    Kinsland, C.4    Mori, H.5    Baba, T.6    Perkins, J.7    Schyns, G.8    Vassieva, O.9    Osterman, A.10    Begley, T.P.11
  • 22
    • 0034033261 scopus 로고    scopus 로고
    • History of the enzyme nomenclature system
    • 10.1093/bioinformatics/16.1.34 10812475
    • Tipton K Boyce S History of the enzyme nomenclature system Bioinformatics 2000 16 34-40 10.1093/bioinformatics/16.1.34 10812475
    • (2000) Bioinformatics , vol.16 , pp. 34-40
    • Tipton, K.1    Boyce, S.2
  • 24
    • 84886762338 scopus 로고    scopus 로고
    • BioWarehouse http://bioinformatics.ai.sri.com/biowarehouse/
  • 25
    • 84886755721 scopus 로고    scopus 로고
    • ExPASY Proteomics Server http://www.expasy.org/cgi-bin/sprot-search-ful
  • 26
    • 84886755855 scopus 로고    scopus 로고
    • IUBMB database http://www.chem.qmul.ac.uk/iubmb/enzyme/
  • 27
    • 84886761612 scopus 로고    scopus 로고
    • MetaCyc http://www.metacyc.org
  • 28
    • 0037459099 scopus 로고    scopus 로고
    • Structural and enzymatic characterization of physarolisin (formerly physaropepsin) proves that it is a unique serine-carboxyl proteinase
    • 10.1016/S0006-291X(03)00083-4 12589815
    • Nishii W Ueki T Miyashita R Kojima M Kim Y Sasaki N K M-M Takahashi K Structural and enzymatic characterization of physarolisin (formerly physaropepsin) proves that it is a unique serine-carboxyl proteinase Biochem Biophys Res Commun 2003 301 4 1023-1029 10.1016/ S0006-291X(03)00083-4 12589815
    • (2003) Biochem Biophys Res Commun , vol.301 , Issue.4 , pp. 1023-1029
    • Nishii, W.1    Ueki, T.2    Miyashita, R.3    Kojima, M.4    Kim, Y.5    Sasaki, N.K.M.-M.6    Takahashi, K.7
  • 29
    • 1542704952 scopus 로고    scopus 로고
    • Cloming, sequence analysis of imidase gene from Alcaligenes eatrophus and its expression in E coli
    • 12557390
    • Wang Y Zhang Y Ding J Li uY Wang J Yu Z Cloming, sequence analysis of imidase gene from Alcaligenes eatrophus and its expression in E coli Wei Sheng Wu Xue Bao 2002 42 2 153-162 12557390
    • (2002) Wei Sheng Wu Xue Bao , vol.42 , Issue.2 , pp. 153-162
    • Wang, Y.1    Zhang, Y.2    Ding, J.3    Li, uY.4    Wang, J.5    Yu, Z.6
  • 31
    • 0029928952 scopus 로고    scopus 로고
    • Cloning and expression of a gene encoding a bacterial enzyme for decontamination of organophosphorus nerve agents and nucleotide sequence of the enzyme
    • 167937 8633861
    • Cheng T Harvey S Chen G Cloning and expression of a gene encoding a bacterial enzyme for decontamination of organophosphorus nerve agents and nucleotide sequence of the enzyme Appl Environ Microbiol 1996 62 5 1636-1641 167937 8633861
    • (1996) Appl Environ Microbiol , vol.62 , Issue.5 , pp. 1636-1641
    • Cheng, T.1    Harvey, S.2    Chen, G.3
  • 34
    • 0031572945 scopus 로고    scopus 로고
    • Enzyme Nomenclature. Recommendations 1992. Supplement 5: Corrections and additions (1999)
    • Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB)
    • Barrett A Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB). Enzyme Nomenclature. Recommendations 1992. Supplement 5: Corrections and additions (1999) Eur J Biochem 1999 250 1 1-6
    • (1999) Eur J Biochem , vol.250 , Issue.1 , pp. 1-6
    • Barrett, A.1
  • 35
    • 0033963089 scopus 로고    scopus 로고
    • The ENZYME database in 2000
    • 102465 10592255 10.1093/nar/28.1.304
    • Bairoch A The ENZYME database in 2000 Nucl Acids Res 2000 28 1 304-305 102465 10592255 10.1093/nar/28.1.304
    • (2000) Nucl Acids Res , vol.28 , Issue.1 , pp. 304-305
    • Bairoch, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.