-
1
-
-
0034503250
-
Different classes of retrotransposons in coniferous spruce species
-
L'Homme Y, Seguin A, Tremblay FM: Different classes of retrotransposons in coniferous spruce species. Genome 2000;43:1084-1089.
-
(2000)
Genome
, vol.43
, pp. 1084-1089
-
-
L'Homme, Y.1
Seguin, A.2
Tremblay, F.M.3
-
2
-
-
33845186134
-
Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution
-
Vitte C, Bennetzen JL: Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution. Proc Natl Acad Sci USA 2006;103:17638-17643.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 17638-17643
-
-
Vitte, C.1
Bennetzen, J.L.2
-
3
-
-
0035923510
-
-
Witte CP, Le QH, Bureau T, Kumar A: Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomes. Proc Natl Acad Sci USA 2001;98:13778-13783.
-
Witte CP, Le QH, Bureau T, Kumar A: Terminal-repeat retrotransposons in miniature (TRIM) are involved in restructuring plant genomes. Proc Natl Acad Sci USA 2001;98:13778-13783.
-
-
-
-
4
-
-
1942421723
-
Large retrotransposon derivatives: Abundant, conserved but nonautonomous retroelements of barley and related genomes
-
Kalendar R, Vicient CM, Peleg O, Anamthawat-Jonsson K, Bolshoy A, Schulman AH: Large retrotransposon derivatives: abundant, conserved but nonautonomous retroelements of barley and related genomes. Genetics 2004;166:1437-1450.
-
(2004)
Genetics
, vol.166
, pp. 1437-1450
-
-
Kalendar, R.1
Vicient, C.M.2
Peleg, O.3
Anamthawat-Jonsson, K.4
Bolshoy, A.5
Schulman, A.H.6
-
5
-
-
23844543047
-
LTR retrotransposons and flowering plant genome size: Emergence of the increase/decrease model
-
Vitte C, Panaud O: LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model. Cytogenet Genome Res 2005;110:91-107.
-
(2005)
Cytogenet Genome Res
, vol.110
, pp. 91-107
-
-
Vitte, C.1
Panaud, O.2
-
6
-
-
33749263896
-
Genomic and genetic characterization of rice Cen3 reveals extensive transcription and evolutionary implications of a complex centromere
-
Yan H, Ito H, Nobuta K, Ouyang S, Jin W, et al: Genomic and genetic characterization of rice Cen3 reveals extensive transcription and evolutionary implications of a complex centromere. Plant Cell 2006;18:2123-2133.
-
(2006)
Plant Cell
, vol.18
, pp. 2123-2133
-
-
Yan, H.1
Ito, H.2
Nobuta, K.3
Ouyang, S.4
Jin, W.5
-
7
-
-
0013630297
-
Nested retrotransposons in the intergenic regions of the maize genome
-
SanMiguel P, Tikhonov A, Jin YK, Motchoulskaia N, Zakharov D, et al: Nested retrotransposons in the intergenic regions of the maize genome. Science 1996;274:765-768.
-
(1996)
Science
, vol.274
, pp. 765-768
-
-
SanMiguel, P.1
Tikhonov, A.2
Jin, Y.K.3
Motchoulskaia, N.4
Zakharov, D.5
-
8
-
-
21644437476
-
Mechanisms of recent genome size variation in flowering plants
-
Bennetzen JL, Ma J, Devos KM: Mechanisms of recent genome size variation in flowering plants. Ann Bot (Lond) 2005;95:127-132.
-
(2005)
Ann Bot (Lond)
, vol.95
, pp. 127-132
-
-
Bennetzen, J.L.1
Ma, J.2
Devos, K.M.3
-
9
-
-
33846108228
-
RetrOryza: A database of the rice LTR-retrotransposons
-
Chaparro C, Guyot R, Zuccolo A, Piegu B, Panaud O: RetrOryza: a database of the rice LTR-retrotransposons. Nucleic Acids Res 2007;35:D66-D70.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Chaparro, C.1
Guyot, R.2
Zuccolo, A.3
Piegu, B.4
Panaud, O.5
-
10
-
-
33749389724
-
Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium
-
Hawkins JS, Kim H, Nason JD, Wing RA, Wendel JF: Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium. Genome Res 2006;16:1252-1261.
-
(2006)
Genome Res
, vol.16
, pp. 1252-1261
-
-
Hawkins, J.S.1
Kim, H.2
Nason, J.D.3
Wing, R.A.4
Wendel, J.F.5
-
11
-
-
33749392949
-
Doubling genome size without polyploidization: Dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice
-
Piegu B, Guyot R, Picault N, Roulin A, Saniyal A, et al: Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice. Genome Res 2006;16:1262-1269.
-
(2006)
Genome Res
, vol.16
, pp. 1262-1269
-
-
Piegu, B.1
Guyot, R.2
Picault, N.3
Roulin, A.4
Saniyal, A.5
-
12
-
-
0031707062
-
The paleontology of intergene retrotransposons of maize
-
SanMiguel P, Gaut BS, Tikhonov A, Nakajima Y, Bennetzen JL: The paleontology of intergene retrotransposons of maize. Nat Genet 1998;20:43-45.
-
(1998)
Nat Genet
, vol.20
, pp. 43-45
-
-
SanMiguel, P.1
Gaut, B.S.2
Tikhonov, A.3
Nakajima, Y.4
Bennetzen, J.L.5
-
13
-
-
13244264889
-
Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.)
-
Vitte C, Ishii T, Lamy F, Brar D, Panaud O: Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.). Mol Genet Genomics 2004;272:504-511.
-
(2004)
Mol Genet Genomics
, vol.272
, pp. 504-511
-
-
Vitte, C.1
Ishii, T.2
Lamy, F.3
Brar, D.4
Panaud, O.5
-
14
-
-
4344616881
-
Rapid recent growth and divergence of rice nuclear genomes
-
Ma J, Bennetzen JL: Rapid recent growth and divergence of rice nuclear genomes. Proc Natl Acad Sci USA 2004;101:12404-12410.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 12404-12410
-
-
Ma, J.1
Bennetzen, J.L.2
-
15
-
-
23344439234
-
DNA rearrangement in orthologous orp regions of the maize, rice and sorghum genomes
-
Ma J, SanMiguel P, Lai J, Messing J, Bennetzen JL: DNA rearrangement in orthologous orp regions of the maize, rice and sorghum genomes. Genetics 2005;170:1209-1220.
-
(2005)
Genetics
, vol.170
, pp. 1209-1220
-
-
Ma, J.1
SanMiguel, P.2
Lai, J.3
Messing, J.4
Bennetzen, J.L.5
-
16
-
-
0037226595
-
Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat
-
Kashkush K, Feldman M, Levy AA: Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat. Nat Genet 2003;33:102-106.
-
(2003)
Nat Genet
, vol.33
, pp. 102-106
-
-
Kashkush, K.1
Feldman, M.2
Levy, A.A.3
-
17
-
-
23844474398
-
Stress activation and genomic impact of Tnt1 retrotransposons in Solanaceae
-
Grandbastien MA, Audeon C, Bonnivard E, Casacuberta JM, Chalhoub B, et al: Stress activation and genomic impact of Tnt1 retrotransposons in Solanaceae. Cytogenet Genome Res 2005;110:229-241.
-
(2005)
Cytogenet Genome Res
, vol.110
, pp. 229-241
-
-
Grandbastien, M.A.1
Audeon, C.2
Bonnivard, E.3
Casacuberta, J.M.4
Chalhoub, B.5
-
18
-
-
0345393079
-
Transcriptional activation mediated by binding of a plant GATA-type zinc finger protein AGP1 to the AG-motif (AGATCCAA) of the wound-inducible Myb gene NtMyb2
-
Sugimoto K, Takeda S, Hirochika H: Transcriptional activation mediated by binding of a plant GATA-type zinc finger protein AGP1 to the AG-motif (AGATCCAA) of the wound-inducible Myb gene NtMyb2. Plant J 2003;36:550-564.
-
(2003)
Plant J
, vol.36
, pp. 550-564
-
-
Sugimoto, K.1
Takeda, S.2
Hirochika, H.3
-
19
-
-
85158032394
-
Mammalian LINE-1 Retrotransposons and related elements
-
Craig N, Craigie R, Gellert M, Lambowitz AM eds, ASM Press, Washington DC
-
Moran J, Gilbert N: Mammalian LINE-1 Retrotransposons and related elements; in Craig N, Craigie R, Gellert M, Lambowitz AM (eds): Mobile DNA II. ASM Press, Washington DC, 2002, pp 836-869.
-
(2002)
Mobile DNA II
, pp. 836-869
-
-
Moran, J.1
Gilbert, N.2
-
20
-
-
0000554795
-
Cin4, an insert altering the structure of the A1 gene in Zea mays, exhibits properties of nonviral retrotransposons
-
Schwarz-Sommer Z, Leclercq L, Gobel E, Saedler H: Cin4, an insert altering the structure of the A1 gene in Zea mays, exhibits properties of nonviral retrotransposons. EMBO J 1987;6:3873-3880.
-
(1987)
EMBO J
, vol.6
, pp. 3873-3880
-
-
Schwarz-Sommer, Z.1
Leclercq, L.2
Gobel, E.3
Saedler, H.4
-
21
-
-
0033180236
-
LINEs, SINEs and repetitive DNA: Non-LTR retrotransposons in plant genomes
-
Schmidt T: LINEs, SINEs and repetitive DNA: non-LTR retrotransposons in plant genomes. Plant Mol Biol 1999;40:903-910.
-
(1999)
Plant Mol Biol
, vol.40
, pp. 903-910
-
-
Schmidt, T.1
-
22
-
-
0027500625
-
An abundant LINE-like element amplified in the genome of Lilium speciosum
-
Leeton PR, Smyth DR: An abundant LINE-like element amplified in the genome of Lilium speciosum. Mol Gen Genet 1993;237:97-104.
-
(1993)
Mol Gen Genet
, vol.237
, pp. 97-104
-
-
Leeton, P.R.1
Smyth, D.R.2
-
23
-
-
0043030233
-
Two-step regulation and continuous retrotransposition of the rice LINE-type retrotransposon Karma
-
Komatsu M, Shimamoto K, Kyozuka J: Two-step regulation and continuous retrotransposition of the rice LINE-type retrotransposon Karma. Plant Cell 2003;15:1934-1944.
-
(2003)
Plant Cell
, vol.15
, pp. 1934-1944
-
-
Komatsu, M.1
Shimamoto, K.2
Kyozuka, J.3
-
24
-
-
33745189463
-
A LINE-type retrotransposon active in meristem stem cells causes heritable transpositions in the sweet potato genome
-
Yamashita H, Tahara M: A LINE-type retrotransposon active in meristem stem cells causes heritable transpositions in the sweet potato genome. Plant Mol Biol 2006;61:79-94.
-
(2006)
Plant Mol Biol
, vol.61
, pp. 79-94
-
-
Yamashita, H.1
Tahara, M.2
-
25
-
-
2442667886
-
Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes
-
Han JS, Szak ST, Boeke JD: Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes. Nature 2004;429:268-274.
-
(2004)
Nature
, vol.429
, pp. 268-274
-
-
Han, J.S.1
Szak, S.T.2
Boeke, J.D.3
-
26
-
-
23844502279
-
HeT-A and TART, two Drosophila retrotransposons with a bona fide role in chromosome structure for more than 60 million years
-
Casacuberta E, Pardue ML: HeT-A and TART, two Drosophila retrotransposons with a bona fide role in chromosome structure for more than 60 million years. Cytogenet Genome Res 2005;110:152-159.
-
(2005)
Cytogenet Genome Res
, vol.110
, pp. 152-159
-
-
Casacuberta, E.1
Pardue, M.L.2
-
27
-
-
0041353551
-
LINE-mediated retrotransposition of marked Alu sequences
-
Dewannieux M, Esnault C, Heidmann T: LINE-mediated retrotransposition of marked Alu sequences. Nat Genet 2003;35:41-48.
-
(2003)
Nat Genet
, vol.35
, pp. 41-48
-
-
Dewannieux, M.1
Esnault, C.2
Heidmann, T.3
-
28
-
-
0036849412
-
LINEs mobilize SINEs in the eel through a shared 3′ sequence
-
Kajikawa M, Okada N: LINEs mobilize SINEs in the eel through a shared 3′ sequence. Cell 2002;111:433-444.
-
(2002)
Cell
, vol.111
, pp. 433-444
-
-
Kajikawa, M.1
Okada, N.2
-
29
-
-
28844473478
-
Short retroposons in eukaryotic genomes
-
Kramerov DA, Vassetzky NS: Short retroposons in eukaryotic genomes. Int Rev Cytol 2005;247:165-221.
-
(2005)
Int Rev Cytol
, vol.247
, pp. 165-221
-
-
Kramerov, D.A.1
Vassetzky, N.S.2
-
30
-
-
0032867545
-
Wide distribution of short interspersed elements among eukaryotic genomes
-
Borodulina OR, Kramerov DA: Wide distribution of short interspersed elements among eukaryotic genomes. FEBS Lett 1999;457:409-413.
-
(1999)
FEBS Lett
, vol.457
, pp. 409-413
-
-
Borodulina, O.R.1
Kramerov, D.A.2
-
31
-
-
0027934527
-
An analysis of retroposition in plants based on a family of SINEs from Brassica napus
-
Deragon JM, Landry BS, Pelissier T, Tutois S, Tourmente S, Picard G: An analysis of retroposition in plants based on a family of SINEs from Brassica napus. J Mol Evol 1994;39:378-386.
-
(1994)
J Mol Evol
, vol.39
, pp. 378-386
-
-
Deragon, J.M.1
Landry, B.S.2
Pelissier, T.3
Tutois, S.4
Tourmente, S.5
Picard, G.6
-
32
-
-
0025936548
-
Diversification of the rice Waxy gene by insertion of mobile DNA elements into introns
-
Umeda M, Ohtsubo H, Ohtsubo E: Diversification of the rice Waxy gene by insertion of mobile DNA elements into introns. Jpn J Genet 1991;66:569-586.
-
(1991)
Jpn J Genet
, vol.66
, pp. 569-586
-
-
Umeda, M.1
Ohtsubo, H.2
Ohtsubo, E.3
-
33
-
-
0035083021
-
The Au family, a novel short interspersed element (SINE) from Aegilops umbellulata
-
Yasui Y, Nasuda S, Matsuoka Y, Kawahara T: The Au family, a novel short interspersed element (SINE) from Aegilops umbellulata. Theor Appl Genet 2001;102:463-470.
-
(2001)
Theor Appl Genet
, vol.102
, pp. 463-470
-
-
Yasui, Y.1
Nasuda, S.2
Matsuoka, Y.3
Kawahara, T.4
-
34
-
-
0027260466
-
Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs
-
Yoshioka Y, Matsumoto S, Kojima S, Ohshima K, Okada N, Machida Y: Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs. Proc Natl Acad Sci USA 1993;90:6562-6566.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 6562-6566
-
-
Yoshioka, Y.1
Matsumoto, S.2
Kojima, S.3
Ohshima, K.4
Okada, N.5
Machida, Y.6
-
35
-
-
0033964296
-
SINE insertions: Powerful tools for molecular systematics
-
Shedlock AM, Okada N: SINE insertions: powerful tools for molecular systematics. Bioessays 2000;22:148-160.
-
(2000)
Bioessays
, vol.22
, pp. 148-160
-
-
Shedlock, A.M.1
Okada, N.2
-
36
-
-
0037225254
-
Polyphyletic origin of cultivated rice: Based on the interspersion pattern of SINEs
-
Cheng C, Motohashi R, Tsuchimoto S, Fukuta Y, Ohtsubo H, Ohtsubo E: Polyphyletic origin of cultivated rice: based on the interspersion pattern of SINEs. Mol Biol Evol 2003;20:67-75.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 67-75
-
-
Cheng, C.1
Motohashi, R.2
Tsuchimoto, S.3
Fukuta, Y.4
Ohtsubo, H.5
Ohtsubo, E.6
-
39
-
-
23844525077
-
Repbase Update, a database of eukaryotic repetitive elements
-
Jurka J, Kapitonov VV, Pavlicek A, Klonowski P, Kohany O, Walichiewicz J: Repbase Update, a database of eukaryotic repetitive elements. Cytogenet Genome Res 2005;110:462-467.
-
(2005)
Cytogenet Genome Res
, vol.110
, pp. 462-467
-
-
Jurka, J.1
Kapitonov, V.V.2
Pavlicek, A.3
Klonowski, P.4
Kohany, O.5
Walichiewicz, J.6
-
40
-
-
0032479378
-
Identification of a short interspersed repetitive element in partially spliced transcripts of the bell pepper (Capsicum annuum) PAP gene: New evolutionary and regulatory aspects on plant tRNA-related SINEs
-
Pozueta-Romero J, Houlne G, Schantz R: Identification of a short interspersed repetitive element in partially spliced transcripts of the bell pepper (Capsicum annuum) PAP gene: new evolutionary and regulatory aspects on plant tRNA-related SINEs. Gene 1998;214:51-58.
-
(1998)
Gene
, vol.214
, pp. 51-58
-
-
Pozueta-Romero, J.1
Houlne, G.2
Schantz, R.3
-
41
-
-
0030856565
-
Evolution of SINE S1 retroposons in Cruciferae plant species
-
Lenoir A, Cournoyer B, Warwick S, Picard G, Deragon JM: Evolution of SINE S1 retroposons in Cruciferae plant species. Mol Biol Evol 1997;14:934-941.
-
(1997)
Mol Biol Evol
, vol.14
, pp. 934-941
-
-
Lenoir, A.1
Cournoyer, B.2
Warwick, S.3
Picard, G.4
Deragon, J.M.5
-
42
-
-
33751048425
-
Short Interspersed Elements (SINEs) in plants: Origin, classification and use as phylogenetic markers
-
Deragon JM, Zhang X: Short Interspersed Elements (SINEs) in plants: Origin, classification and use as phylogenetic markers. Syst Biol 2006;55:949-956.
-
(2006)
Syst Biol
, vol.55
, pp. 949-956
-
-
Deragon, J.M.1
Zhang, X.2
-
43
-
-
33845637289
-
Common evolutionary trends for SINE RNA structures
-
Sun FJ, Fleurdepine S, Bousquet-Antonelli C, Caetano-Anolles G, Deragon JM: Common evolutionary trends for SINE RNA structures. Trends Genet 2007;23:26-33.
-
(2007)
Trends Genet
, vol.23
, pp. 26-33
-
-
Sun, F.J.1
Fleurdepine, S.2
Bousquet-Antonelli, C.3
Caetano-Anolles, G.4
Deragon, J.M.5
-
44
-
-
4143085887
-
Merlin, a new superfamily of DNA transposons identified in diverse animal genomes and related to bacterial IS1016 insertion sequences
-
Feschotte C: Merlin, a new superfamily of DNA transposons identified in diverse animal genomes and related to bacterial IS1016 insertion sequences. Mol Biol Evol 2004;21:1769-1780.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 1769-1780
-
-
Feschotte, C.1
-
45
-
-
0036250001
-
Plant transposable elements: Where genetics meets genomics
-
Feschotte C, Jiang N, Wessler SR: Plant transposable elements: where genetics meets genomics. Nat Rev Genet 2002;3:329-341.
-
(2002)
Nat Rev Genet
, vol.3
, pp. 329-341
-
-
Feschotte, C.1
Jiang, N.2
Wessler, S.R.3
-
46
-
-
0037975554
-
Molecular paleontology of transposable elements in the Drosophila melanogaster genome
-
Kapitonov VV, Jurka J: Molecular paleontology of transposable elements in the Drosophila melanogaster genome. Proc Natl Acad Sci USA 2003;100:6569-6574.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 6569-6574
-
-
Kapitonov, V.V.1
Jurka, J.2
-
47
-
-
33751005863
-
The proteins encoded by the pogo-like Lemi1 element bind the TIRs and subterminal repeated motifs of the Arabidopsis Emigrant MITE: Consequences for the transposition mechanism of MITEs
-
Loot C, Santiago N, Sanz A, Casacuberta JM: The proteins encoded by the pogo-like Lemi1 element bind the TIRs and subterminal repeated motifs of the Arabidopsis Emigrant MITE: consequences for the transposition mechanism of MITEs. Nucleic Acids Res 2006;34:5238-5246.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 5238-5246
-
-
Loot, C.1
Santiago, N.2
Sanz, A.3
Casacuberta, J.M.4
-
48
-
-
0037633476
-
Plant LTR-retrotransposons and MITEs: Control of transposition and impact on the evolution of plant genes and genomes
-
Casacuberta JM, Santiago N: Plant LTR-retrotransposons and MITEs: control of transposition and impact on the evolution of plant genes and genomes. Gene 2003;311:1-11.
-
(2003)
Gene
, vol.311
, pp. 1-11
-
-
Casacuberta, J.M.1
Santiago, N.2
-
49
-
-
0346034923
-
An active DNA transposon family in rice
-
Jiang N, Bao Z, Zhang X, Hirochika H, Eddy SR, McCouch SR, Wessler SR: An active DNA transposon family in rice. Nature 2003;421:163-167.
-
(2003)
Nature
, vol.421
, pp. 163-167
-
-
Jiang, N.1
Bao, Z.2
Zhang, X.3
Hirochika, H.4
Eddy, S.R.5
McCouch, S.R.6
Wessler, S.R.7
-
50
-
-
0346003772
-
The plant MITE mPing is mobilized in anther culture
-
Kikuchi K, Terauchi K, Wada M, Hirano HY: The plant MITE mPing is mobilized in anther culture. Nature 2003;421:167-170.
-
(2003)
Nature
, vol.421
, pp. 167-170
-
-
Kikuchi, K.1
Terauchi, K.2
Wada, M.3
Hirano, H.Y.4
-
51
-
-
17844374614
-
DNA-binding specificity of rice mariner-like transposases and interactions with Stowaway MITEs
-
Feschotte C, Osterlund MT, Peeler R, Wessler SR: DNA-binding specificity of rice mariner-like transposases and interactions with Stowaway MITEs. Nucleic Acids Res 2005;33:2153-2165.
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 2153-2165
-
-
Feschotte, C.1
Osterlund, M.T.2
Peeler, R.3
Wessler, S.R.4
-
52
-
-
0037295458
-
Genome-wide analysis of mariner-like transposable elements in rice reveals complex relationships with stowaway miniature inverted repeat transposable elements (MITEs)
-
Feschotte C, Swamy L, Wessler SR: Genome-wide analysis of mariner-like transposable elements in rice reveals complex relationships with stowaway miniature inverted repeat transposable elements (MITEs). Genetics 2003;163:747-758.
-
(2003)
Genetics
, vol.163
, pp. 747-758
-
-
Feschotte, C.1
Swamy, L.2
Wessler, S.R.3
-
53
-
-
26444573299
-
A segmental deletion series generated by sister-chromatid transposition of Ac transposable elements in maize
-
Zhang J, Peterson T: A segmental deletion series generated by sister-chromatid transposition of Ac transposable elements in maize. Genetics 2005;171:333-344.
-
(2005)
Genetics
, vol.171
, pp. 333-344
-
-
Zhang, J.1
Peterson, T.2
-
54
-
-
0036900064
-
Genome-wide analysis of the Emigrant family of MITEs of Arabidopsis thaliana
-
Santiago N, Herraiz C, Goni JR, Messeguer X, Casacuberta JM: Genome-wide analysis of the Emigrant family of MITEs of Arabidopsis thaliana. Mol Biol Evol 2002;19:2285-2293.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 2285-2293
-
-
Santiago, N.1
Herraiz, C.2
Goni, J.R.3
Messeguer, X.4
Casacuberta, J.M.5
-
55
-
-
10044244768
-
siRNAs targeting an intronic transposon in the regulation of natural flowering behavior in Arabidopsis
-
Liu J, He Y, Amasino R, Chen X: siRNAs targeting an intronic transposon in the regulation of natural flowering behavior in Arabidopsis. Genes Dev 2004;18:2873-2878.
-
(2004)
Genes Dev
, vol.18
, pp. 2873-2878
-
-
Liu, J.1
He, Y.2
Amasino, R.3
Chen, X.4
-
56
-
-
33748936552
-
Turning junk into gold: Domestication of transposable elements and the creation of new genes in eukaryotes
-
Volff JN: Turning junk into gold: domestication of transposable elements and the creation of new genes in eukaryotes. Bioessays 2006;28:913-922.
-
(2006)
Bioessays
, vol.28
, pp. 913-922
-
-
Volff, J.N.1
-
57
-
-
0038192421
-
The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway
-
Hudson ME, Lisch DR, Quail PH: The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. Plant J 2003;34:453-471.
-
(2003)
Plant J
, vol.34
, pp. 453-471
-
-
Hudson, M.E.1
Lisch, D.R.2
Quail, P.H.3
-
58
-
-
24744464809
-
-
Cowan RK, Hoen DR, Schoen DJ, Bureau TE: MUSTANG is a novel family of domesticated transposase genes found in diverse angiosperms. Mol Biol Evol 2005;22:2084-2089.
-
Cowan RK, Hoen DR, Schoen DJ, Bureau TE: MUSTANG is a novel family of domesticated transposase genes found in diverse angiosperms. Mol Biol Evol 2005;22:2084-2089.
-
-
-
-
59
-
-
33746057808
-
A hAT superfamily transposase recruited by the cereal grass genome
-
Muehlbauer GJ, Bhau BS, Syed NH, Heinen S, Cho S, et al: A hAT superfamily transposase recruited by the cereal grass genome. Mol Genet Genomics 2006;275:553-563.
-
(2006)
Mol Genet Genomics
, vol.275
, pp. 553-563
-
-
Muehlbauer, G.J.1
Bhau, B.S.2
Syed, N.H.3
Heinen, S.4
Cho, S.5
-
60
-
-
22444439135
-
-
Bundock P, Hooykaas P: An Arabidopsis hAT-like transposase is essential for plant development. Nature 2005;436:282-284.
-
Bundock P, Hooykaas P: An Arabidopsis hAT-like transposase is essential for plant development. Nature 2005;436:282-284.
-
-
-
-
61
-
-
33744497802
-
Birth of a chimeric primate gene by capture of the transposase gene from a mobile element
-
Cordaux R, Udit S, Batzer MA, Feschotte C: Birth of a chimeric primate gene by capture of the transposase gene from a mobile element. Proc Natl Acad Sci USA 2006;103:8101-8106.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 8101-8106
-
-
Cordaux, R.1
Udit, S.2
Batzer, M.A.3
Feschotte, C.4
-
62
-
-
22744445703
-
RAG1 core and V(D)J recombination signal sequences were derived from Transib transposons
-
Kapitonov VV, Jurka J: RAG1 core and V(D)J recombination signal sequences were derived from Transib transposons. PLoS Biol 2005;3:e181.
-
(2005)
PLoS Biol
, vol.3
-
-
Kapitonov, V.V.1
Jurka, J.2
-
63
-
-
4944239027
-
Pack-MULE transposable elements mediate gene evolution in plants
-
Jiang N, Bao Z, Zhang X, Eddy SR, Wessler SR: Pack-MULE transposable elements mediate gene evolution in plants. Nature 2004;431:569-573.
-
(2004)
Nature
, vol.431
, pp. 569-573
-
-
Jiang, N.1
Bao, Z.2
Zhang, X.3
Eddy, S.R.4
Wessler, S.R.5
-
64
-
-
24344459435
-
-
Juretic N, Hoen DR, Huynh ML, Harrison PM, Bureau TE: The evolutionary fate of MULE-mediated duplications of host gene fragments in rice. Genome Res 2005;15:1292-1297.
-
Juretic N, Hoen DR, Huynh ML, Harrison PM, Bureau TE: The evolutionary fate of MULE-mediated duplications of host gene fragments in rice. Genome Res 2005;15:1292-1297.
-
-
-
-
65
-
-
33644873836
-
The wp mutation of Glycine max carries a gene-fragment-rich transposon of the CACTA superfamily
-
Zabala G, Vodkin LO: The wp mutation of Glycine max carries a gene-fragment-rich transposon of the CACTA superfamily. Plant Cell 2005;17:2619-2632.
-
(2005)
Plant Cell
, vol.17
, pp. 2619-2632
-
-
Zabala, G.1
Vodkin, L.O.2
-
66
-
-
0035902449
-
Rolling-circle transposons in eukaryotes
-
Kapitonov VV, Jurka J: Rolling-circle transposons in eukaryotes. Proc Natl Acad Sci USA 2001;98:8714-8719.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8714-8719
-
-
Kapitonov, V.V.1
Jurka, J.2
-
67
-
-
28344433379
-
Plant genomes: Massive changes of the maize genome are caused by Helitrons
-
Lal SK, Hannah LC: Plant genomes: massive changes of the maize genome are caused by Helitrons. Heredity 2005;95:421-422.
-
(2005)
Heredity
, vol.95
, pp. 421-422
-
-
Lal, S.K.1
Hannah, L.C.2
-
68
-
-
25144488228
-
Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize
-
Morgante M, Brunner S, Pea G, Fengler K, Zuccolo A, Rafalski A: Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize. Nat Genet 2005;37:997-1002.
-
(2005)
Nat Genet
, vol.37
, pp. 997-1002
-
-
Morgante, M.1
Brunner, S.2
Pea, G.3
Fengler, K.4
Zuccolo, A.5
Rafalski, A.6
-
69
-
-
33847275983
-
Maize haplotype with a helitron-amplified cytidine deaminase gene copy
-
Xu JH, Messing J: Maize haplotype with a helitron-amplified cytidine deaminase gene copy. BMC Genet 2006;7:52.
-
(2006)
BMC Genet
, vol.7
, pp. 52
-
-
Xu, J.H.1
Messing, J.2
-
70
-
-
0019955504
-
DNA sequence of a foldback transposable element in Drosophila
-
Potter SS: DNA sequence of a foldback transposable element in Drosophila. Nature 1982;297:201-204.
-
(1982)
Nature
, vol.297
, pp. 201-204
-
-
Potter, S.S.1
-
71
-
-
23944452612
-
RYS1, a foldback transposon, is activated by tissue culture and shows preferential insertion points into the rye genome
-
Alves E, Ballesteros I, Linacero R, Vazquez AM: RYS1, a foldback transposon, is activated by tissue culture and shows preferential insertion points into the rye genome. Theor Appl Genet 2005;111:431-436.
-
(2005)
Theor Appl Genet
, vol.111
, pp. 431-436
-
-
Alves, E.1
Ballesteros, I.2
Linacero, R.3
Vazquez, A.M.4
-
73
-
-
0031194273
-
Foldback transposable elements in plants
-
Rebatchouk D, Narita JO: Foldback transposable elements in plants. Plant Mol Biol 1997;34:831-835.
-
(1997)
Plant Mol Biol
, vol.34
, pp. 831-835
-
-
Rebatchouk, D.1
Narita, J.O.2
-
74
-
-
0034532479
-
FARE, a new family of foldback transposons in Arabidopsis
-
Windsor AJ, Waddell CS: FARE, a new family of foldback transposons in Arabidopsis. Genetics 2000;156:1983-1995.
-
(2000)
Genetics
, vol.156
, pp. 1983-1995
-
-
Windsor, A.J.1
Waddell, C.S.2
-
75
-
-
0021275440
-
Structure of chromosomal rearrangements induced by the FB transposable element in Drosophila
-
Collins M, Rubin GM: Structure of chromosomal rearrangements induced by the FB transposable element in Drosophila. Nature 1984;308:323-327.
-
(1984)
Nature
, vol.308
, pp. 323-327
-
-
Collins, M.1
Rubin, G.M.2
-
76
-
-
0020541711
-
High-frequency precise excision of the Drosophila foldback transposable element
-
Collins M, Rubin GM: High-frequency precise excision of the Drosophila foldback transposable element. Nature 1983;303:259-260.
-
(1983)
Nature
, vol.303
, pp. 259-260
-
-
Collins, M.1
Rubin, G.M.2
|