Eicosapentaenoic acid plays a beneficial role in membrane organization and cell division of a cold-adapted bacterium, shewanella livingstonensis Ac10

Journal of Bacteriology

Volumn 191, Issue 2, 2009, Pages 632-640

  Kawamoto, Jun ^a   Kurihara, Tatsuo ^a   Yamamoto, Kentaro ^a   Nagayasu, Makiko ^a   Tani, Yasushi ^a   Mihara, Hisaaki ^a   Hosokawa, Masashi ^b   Baba, Takeshi ^c   Sato, Satoshi B ^a   Esak, Nobuyoshi ^a  

^a KYOTO UNIVERSITY   (Japan)

^b HOKKAIDO UNIVERSITY   (Japan)

^c IBARAKI PREFECTURAL UNIVERSITY OF HEALTH SCIENCES   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ICOSAPENTAENOIC ACID; LIPID; PHOSPHOLIPID;

ARTICLE; BACTERIAL GENE; CELL DIVISION; CONTROLLED STUDY; ELECTRON MICROSCOPY; GENE EXPRESSION; GENE SEQUENCE; MEMBRANE STRUCTURE; NONHUMAN; NUCLEOTIDE SEQUENCE; ORF2 GENE; ORF5 GENE; ORF6 GENE; ORF7 GENE; ORF8 GENE; PRIORITY JOURNAL; SHEWANELLA; SHEWANELLA LIVINGSTONENSIS;

ADAPTATION, PHYSIOLOGICAL; BACTERIAL PROTEINS; CELL DIVISION; CELL MEMBRANE; COLD TEMPERATURE; EICOSAPENTAENOIC ACID; MEMBRANE FLUIDITY; MUTATION; PHOSPHOLIPIDS; SHEWANELLA;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; SHEWANELLA LIVINGSTONENSIS;

EID: 58649113221     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.00881-08     Document Type: Article

References (38)

1. Albert, C. M., C. H. Hennekens, C. J. O'Donnell, U. A. Ajani, V. J. Carey, W. C. Willett, J. N. Ruskin, and J. E. Manson. 1998. Fish consumption and risk of sudden cardiac death. JAMA 279:23-28.
2. Alexeyev, M. F. 1999. The pKNOCK series of broad-host-range mobilizable suicide vectors for gene knockout and targeted DNA insertion into the chromosome of gram-negative bacteria. BioTechniques 26:824-826, 828.
3. Allen, E. E., D. Facciotti, and D. H. Bartlett. 1999. Monounsaturated but not polyunsaturated fatty acids are required for growth of the deep-sea bacterium Photobacterium projundum SS9 at high pressure and low temperature. Appl. Environ. Microbiol. 65:1710-1720.
4. Awano, N., C. Xu, H. Ke, K. Inoue, M. Inouye, and S. Phadtare. 2007. Complementation analysis of the cold-sensitive phenotype of the Escherichia coli csdA deletion strain. J. Bacteriol. 189:5808- 5815.
5. Birch, E. E., S. Garfield, D. R. Hoffman, R. Uauy, and D. G. Birch. 2000. A randomized controlled trial of early dietary supply of long-chain polyunsaturated fatty acids and mental development in term infants. Dev. Med. Child Neurol. 42:174-181.
6. Bligh, E. G., and W. J. Dyer. 1959. A rapid method of total lipid extraction and purification. Can. J. Biochem. Physiol. 37:911-917.
7. Brown, S. D., M. Martin, S. Deshpande, S. Seal, K. Huang, E. Alm, Y. Yang, L. Wu, T. Yan, X. Liu, A. Arkin, K. Chourey, J. Zhou, and D. K. Thompson. 2006. Cellular response of Shewanella oneidensis to strontium stress. Appl. Environ. Microbiol. 72:890-900.
8. Bruno, M. J., R. E. Koeppe II, and O. S. Andersen. 2007. Docosahexaenoic acid alters bilayer elastic properties. Proc. Natl. Acad. Sci. USA 104:9638-9643.
9. Dewey, A., C. Baughan, T. Dean, B. Higgins, and I. Johnson. 2007. Eicosapentaenoic acid (EPA, an omega-3 fatty acid from fish oils) for the treatment of cancer cachexia. Cochrane Database Syst. Rev. doi:10.1002/14651858. CD004597.pub2.
10. Fang, J., C. Kato, T. Sato, O. Chan, and D. McKay. 2004. Biosynthesis and dietary uptake of polyunsaturated fatty acids by piezophilic bacteria. Comp. Biochem. Physiol. B Biochem. Mol. Biol. 137:455-461.
11. Feller, S. E. 2008. Acyl chain conformations in phospholipid bilayers: a comparative study of docosahexaenoic acid and saturated fatty acids. Chem. Phys Lipids 153:76-80.
12. Fishov, I., and C. L. Woldringh. 1999. Visualization of membrane domains in Escherichia coli. Mol. Microbiol. 32:1166-1172.
13. Galkin, A., L. Kulakova, H. Ashida, Y. Sawa, and N. Esaki. 1999. Cold- adapted alanine dehydrogenases from two Antarctic bacterial strains: gene cloning, protein characterization, and comparison with mesophilic and ther-mophilic counterparts. Appl. Environ. Microbiol. 65:4014-4020.
14. Galla, H. J., and E. Sackmann. 1974. Lateral diffusion in the hydrophobic region of membranes: use of pyrene excimers as optical probes. Biochim. Biophys. Acta 339:103-115.
15. Hong, H., and L. K. Tamm. 2004. Elastic coupling of integral membrane protein stability to lipid bilayer forces. Proc. Natl. Acad. Sci. USA 101:4065-4070.
16. Hosokawa, M., K. Takahashi, H. M., and M. Egi. 1995. Phospholipase A2-mediated synthesis of phosphatidylethanolamine containing highly unsaturated fatty acids. Int. J. Food Sci. Technol. 29:721-725.
17. Jones, P. G., M. Mitta, Y. Kim, W. Jiang, and M. Inouye. 1996. Cold shock induces a major ribosomal-associated protein that unwinds double-stranded RNA in Escherichia coli. Proc. Natl. Acad. Sci. USA 93:76-80.
18. Kato, C., and Y. Nogi. 2001. Correlation between phylogenetic structure and function: examples from deep-sea Shewanella. FEMS Microbiol. Ecol. 35: 223-230.
19. Kawamoto, J., T. Kurihara, M. Kitagawa, I. Kato, and N. Esaki. 2007. Proteomic studies of an Antarctic cold-adapted bacterium, Shewanella liv- ingstonensis Ac10, for global identification of cold-inducible proteins. Ex-tremophiles 11:819-826.
20. Kleinschmidt, J. H., and L. K. Tamm. 2002. Secondaryand tertiarystructure formation of the beta-barrel membrane protein OmpA is synchronized and depends on membrane thickness. J. Mol. Biol. 324:319-330.
21. Methe, B. A., K. E. Nelson, J. W. Deming, B. Momen, E. Melamud, X. Zhang, J. Moult, R. Madupu, W. C. Nelson, R. J. Dodson, L. M. Brinkac, S. C. Daugherty, A. S. Durkin, R. T. DeBoy, J. F. Kolonay, S. A. Sullivan, L. Zhou, T. M. Davidsen, M. Wu, A. L. Huston, M. Lewis, B. Weaver, J. F. Weidman, H. Khouri, T. R. Utterback, T. V. Feldblyum, and C. M. Fraser. 2005. The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses. Proc. Natl. Acad. Sci. USA 102:10913-10918.
22. Metz, J. G., P. Roessler, D. Facciotti, C. Levering, F. Dittrich, M. Lassner, R. Valentine, K. Lardizabal, F. Domergue, A. Yamada, K. Yazawa, V. Knauf, and J. Browse. 2001. Productionofpolyunsaturated fattyacids bypolyketide synthases in both prokaryotes and eukaryotes. Science 293:290-293.
23. Mineki, R., H. Taka, T. Fujimura, M. Kikkawa, N. Shindo, and K. Murayama. 2002. In situ alkylation with acrylamide for identification of cysteinyl residues in proteins during one- and two-dimensional sodium dodecyl sulphate-polyacrylamide gel electrophoresis. Proteomics 2:1672-1681.
24. Moeck, G. S., and J. W. Coulton. 1998. TonB-dependent iron acquisition:mechanisms of siderophore-mediated active transport. Mol. Microbiol. 28: 675-681.
25. Nishida, T., Y. Orikasa, Y. Ito, R. Yu, A. Yamada, K. Watanabe, and H. Okuyama. 2006. Escherichia coli engineered to produce eicosapentaenoic acid becomes resistant against oxidative damages. FEBS Lett. 580:2731-2735.
26. Nogi, Y., C. Kato, and K. Horikoshi. 2002. Psychromonas kaikoae sp. nov., a novel piezophilic bacterium from the deepest cold-seep sediments in the Japan Trench. Int. J. Syst. Evol. Microbiol. 52:1527-1532.
27. Okuyama, H., Y. Orikasa, T. Nishida, K. Watanabe, and N. Morita. 2007. Bacterial genes responsible for the biosynthesis of eicosapentaenoic and docosahexaenoic acids and their heterologous expression. Appl. Environ. Microbiol. 73:665-670.
28. Osborn, M. J., J. E. Gander, and E. Parisi. 1972. Mechanism of assembly of the outer membrane of Salmonella typhimurium. Site of synthesis of lipo- polysaccharide. J. Biol. Chem. 247:3973-3986.
29. Satomi, M., H. Oikawa, and Y. Yano. 2003. Shewanella marinintestina sp. nov., Shewanella schlegeliana sp. nov. and Shewanella sairae sp. nov., novel eicosapentaenoic-acid-producing marine bacteria isolated from sea-animal intestines. Int. J. Syst. Evol. Microbiol. 53:491-499.
30. Schulz, G. E. 2003. Transmembrane beta-barrel proteins. Adv. Protein Chem. 63:47-70.
31. Stillwell, W., and S. R. Wassall. 2003. Docosahexaenoic acid: membrane properties of a unique fatty acid. Chem. Phys. Lipids 126:1-27.
32. Suefuji, K., R. Valluzzi, and D. RayChaudhuri. 2002. Dynamic assembly of MinD into filament bundles modulated by ATP, phospholipids, and MinE. Proc. Natl. Acad. Sci. USA 99:16776-16781.
33. Thompson, D. K., A. S. Beliaev, C. S. Giometti, S. L. Tollaksen, T. Khare, D. P. Lies, K. H. Nealson, H. Lim, J. Yates III, C. C. Brandt, J. M. Tiedje, and J. Zhou. 2002. Transcriptional and proteomic analysis of a ferric uptake regulator (fur) mutant of Shewanella oneidensis: possible involvement of fur in energy metabolism, transcriptional regulation, and oxidative stress. Appl. Environ. Microbiol. 68:881-892.
34. Valentine, R. C., and D. L. Valentine. 2004. Omega-3 fatty acids in cellular membranes: a unified concept. Prog. Lipid Res. 43:383-402.
35. van Meer, G., D. R. Voelker, and G. W. Feigenson. 2008. Membrane lipids: where they are and how they behave. Nat. Rev. Mol. Cell Biol. 9:112-124.
36. Watanabe, K., K. Yazawa, K. Kondo, and A. Kawaguchi. 1997. Fatty acid synthesis of an eicosapentaenoic acid-producing bacterium: de novo synthesis, chain elongation, and desaturation systems. J. Biochem. (Tokyo) 122: 467-473.
37. Weiss, D. S. 2004. Bacterial cell division and the septal ring. Mol. Microbiol. 54:588-597.
38. Yamanaka, K. 1999. Cold shock response in Escherichia coli. J. Mol. Micro- biol. Biotechnol. 1:193-202.