Differentially expressed transcripts in adipose tissue between Korean native pig and Yorkshire breeds

Animal Genetics

Volumn 40, Issue 1, 2009, Pages 115-118

  Moon, J K ^a   Kim, K S ^b   Kim, J J ^c   Choi, B H ^d   Cho, B W ^e   Kim, T H ^d   Lee, C K ^a  

^a Korea University   (South Korea)

^b Chungbuk National University   (South Korea)

^c Yeungnam University   (South Korea)

^d National Institute of Animal Science   (South Korea)

^e Pusan National University   (South Korea)

Author keywords

Gene expression profile; Korean native pig; Porcine adipose tissue; Yorkshire

Indexed keywords

ADIPOSE TISSUE; ANIMAL; ARTICLE; DNA MICROARRAY; GENE EXPRESSION PROFILING; GENETICS; METABOLISM; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SPECIES DIFFERENCE; SWINE;

ADIPOSE TISSUE; ANIMALS; GENE EXPRESSION PROFILING; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SPECIES SPECIFICITY; SUS SCROFA;

SUIDAE; SUS;

EID: 58549096547     PISSN: 02689146     EISSN: 13652052     Source Type: Journal    
DOI: 10.1111/j.1365-2052.2008.01798.x     Document Type: Article

References (20)

1. Carmen G.Y. Victor S.M. (2006) Signalling mechanisms regulating lipolysis. Cellular Signalling 18, 401 8.
2. Diaz G.J. Squires E.J. (2000) Metabolism of 3-methylindole by porcine liver microsomes: responsible cytochrome P450 enzymes. Toxicological Sciences 55, 284 92.
3. Gronning L.M., Baillie G.S., Cederberg A., Lynch M.J., Houslay M.D., Enerback S. Tasken K. (2006) Reduced PDE4 expression and activity contributes to enhanced catecholamine-induced cAMP accumulation in adipocytes from FOXC2 transgenic mice. FEBS Letters 580, 4126 30.
4. Houslay M.D. Adams D.R. (2003) PDE4 cAMP phosphodiesterases: modular enzymes that orchestrate signalling cross-talk, desensitization and compartmentalization. Biochemical Journal 370, 1 18.
5. Jeon J.T., Park E.W., Jeon H.J., Kim T.H., Lee K.T. Cheong I.C. (2003) A large-insert porcine library with sevenfold genome coverage: a tool for positional cloning of candidate genes for major quantitative traits. Molecules and Cells 16, 113 6.
6. Kim K.S., Yeo J.S. Kim J.W. (2002) Assessment of genetic diversity of Korean native pig (Sus scrofa) using AFLP markers. Genes & Genetic Systems 77, 361 8.
7. Kim T.H., Choi B.H., Chang G.W., Lee K.T., Lee H.Y., Lee J.H., Kim K.S., Park C.K. Moran C. (2005a) Molecular characterization and chromosomal mapping of porcine adipose differentiation-related protein (ADRP). Journal of Animal Breeding and Genetics 122, 240 6.
8. Kim T.H., Kim K.S., Choi B.H., Yoon D.H., Jang G.W., Lee K.T., Chung H.Y., Lee H.Y., Park H.S. Lee J.W. (2005b) Genetic structure of pig breeds from Korea and China using microsatellite loci analysis. Journal of Animal Science 83, 2255 63.
9. Lee Y., Tsai J., Sunkara S., Karamycheva S., Pertea G., Sultana R., Antonescu V., Chan A., Cheung F. Quackenbush J. (2005) The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes. Nucleic Acids Research 33, D71 4.
10. Lemaire R., Bayle J., Mecham R.P. Lafyatis R. (2007) Microfibril- associated MAGP-2 stimulates elastic fiber assembly. Journal of Biological Chemistry 282, 800 8.
11. Lin Z., Lou Y. Squires E.J. (2004) Molecular cloning, expression and functional characterization of the cytochrome P450 2A6 gene in pig liver. Animal Genetics 35, 314 6.
12. Nadon R. Shoemaker J. (2002) Statistical issues with microarrays: processing and analysis. Trends in Genetics 18, 265 71.
13. Nakamura J., Okamura N. Kawakami Y. (2004) Augmentation of lipolysis in adipocytes from fed rats, but not from starved rats, by inhibition of rolipram-sensitive phosphodiesterase 4. Archives of Biochemistry and Biophysics 425, 106 14.
14. Penner A.S., Rock M.J., Kielty C.M. Shipley J.M. (2002) Microfibril-associated glycoprotein-2 interacts with fibrillin-1 and fibrillin-2 suggesting a role for MAGP-2 in elastic fiber assembly. Journal of Biological Chemistry 277, 35044 9.
15. Snyder P.B., Esselstyn J.M., Loughney K., Wolda S.L. Florio V.A. (2005) The role of cyclic nucleotide phosphodiesterases in the regulation of adipocyte lipolysis. Journal of Lipid Research 46, 494 503.
16. Tsai S., Cassady J.P., Freking B.A., Nonneman D.J., Rohrer G.A. Piedrahita J.A. (2006a) Annotation of the Affymetrix porcine genome microarray. Animal Genetics 37, 423 4.
17. Tsai S., Mir B., Martin A.C. et al. (2006b) Detection of transcriptional difference of porcine imprinted genes using different microarray platforms. BMC Genomics 7, 328.
18. Tuggle C.K., Wang Y. Couture O. (2007) Advances in swine transcriptomics. International Journal of Biological Sciences 3, 132 52.
19. Wang H., Reaves L.A. Edens N.K. (2006) Ginseng extract inhibits lipolysis in rat adipocytes in vitro by activating phosphodiesterase 4. Journal of Nutrition 136, 337 42.
20. Zhao S.H., Recknor J., Lunney J.K., Nettleton D., Kuhar D., Orley S. Tuggle C.K. (2005) Validation of a first-generation long-oligonucleotide microarray for transcriptional profiling in the pig. Genomics 86, 618 25.