Bioremediation of polycyclic aromatic hydrocarbons by fungal laccases engineered by directed evolution

Biocatalysis and Biotransformation

Volumn 25, Issue 2-4, 2007, Pages 219-228

  Zumárraga, Miren ^a   Plou, Francisco J ^a   García Arellano, Humberto ^a   Ballesteros, Antonio ^a   Alcalde, Miguel ^a  

^a INSTITUTO DE CATÁLISIS Y PETROLEOQUÍMICA   (Spain)

Author keywords

Directed evolution; Fungal laccase; Organic co solvent; Polycyclic aromatic hydrocarbons

Indexed keywords

AQUEOUS MEDIA; COSOLVENTS; DIRECTED EVOLUTION; FUNGAL LACCASES; LACCASES; LIGNIN DERIVATIVES; MYCELIOPHTHORA THERMOPHILA; ORGANIC CO-SOLVENT; PROTEIN STRUCTURES; RANDOM MUTAGENESIS; SACCHAROMYCES CEREVISIAE; TRANSFORMATION RATES; TURNOVER RATE;

ACETONITRILE; BIODEGRADATION; BIOREMEDIATION; BIOTECHNOLOGY; ETHANOL; ORGANIC SOLVENTS; OXIDATION; PHENOLS; POLLUTION; POLYCYCLIC AROMATIC HYDROCARBONS; RESINS; SYNTHESIS (CHEMICAL);

AROMATIC HYDROCARBONS;

EID: 58149382237     PISSN: 10242422     EISSN: 10292446     Source Type: Journal    
DOI: 10.1080/10242420701444272     Document Type: Article

References (40)

1. Alcalde M. 2007. Laccase: Biological functions, molecular structure and industrial applications. In: Polaina J, MacCabe AP, editors. Industrial enzymes: Structure, functions and applications. Heidelberg: Springer. p 459-474.
2. Alcalde M, Bulter T, Arnold FH. 2002. Colorimetric assays for biodegradation of polycyclic aromatic hydrocarbons by fungal laccases. J. Biomol Screen 7:547-553. (Pubitemid 135752870)
3. Alcalde M, Bulter T, Zumárraga M, García-Arellano H, Mencía M, Plou FJ, Ballesteros A. 2005. Screening mutant libraries of fungal laccases in the presence of organic solvents. J Biomol Screen 10:624-631. (Pubitemid 41306661)
4. Alcalde M, Ferrer M, Plou FJ, Ballesteros M. 2006. Environmental biocatalysis: From remediation with enzymes to novel green processes. Trends Biotechnol 24:281-287. (Pubitemid 43841912)
5. Arnold FH. 2006. Fancy footwork in the sequence space shuffle. Nat Biotechnol 24:328-330.
6. Arnold FH, Georgiou G. 2003. Directed evolution: Library creation. Totowa, New Jersey: Humana Press.
7. Baldrian P. 2006. Fungal laccases - occurrence and properties. FEMS Microbiol Rev 30:215-242.
8. Bloom JD, Meyer MM, Meinhold P, Otey CR, MacMillan D, Arnold FH. 2005. Evolving strategies for enzyme engineering. Curr Opin Struc Biol 15:447-452.
9. Bourbonnais R, Paice MG, Reid ID, Lanthier P, Yaguchi M. 1995. Lignin oxidation by laccase isozymes from Trametes versicolor and role of the mediator 2,2′-azinobis(3-ethylbenzthiazoline-6-sulfonate) in kraft lignin depolymerization. Appl Environ Microb 61:1876-1880.
10. Bradford MM. 1976. Rapid and sensitive method for quantitation of microgram quantities of protein utilizing principle of protein-dye binding. Biochemistry 72:248-254.
11. Bulter T, Alcalde M, Sieber V, Meinhold P, Schlachtbauer C, Arnold FH. 2003. Functional expression of a fungal laccase in Saccharomyces cerevisiae by directed evolution. Appl Environ Microb 69:987-995. (Pubitemid 36210863)
12. Call HP, Mucke I. 1997. History, overview and applications of mediated lignolytic systems, especially laccase-mediator systems (Lignozym(R)-process). J Biotechnol 53:163-202. (Pubitemid 27286437)
13. Camarero S, Ibarra D, Martinez MJ, Martinez AT. 2005. Lignin-derived compounds as efficient laccase mediators for decolorization of different types of recalcitrant dyes. Appl Environ Microbiol 71:1775-1784. (Pubitemid 40546092)
14. Cerniglia CE. 1992. Biodegradation of polycyclic aromatic hydrocarbons. Biodegradation 3:351-368.
15. Chica RA, Doucet N, Pelletier JN. 2005. Semi-rational approaches to engineering enzyme activity: Combining the benefits of directed evolution and rational design. Curr Opin Biotech 16:378-384. (Pubitemid 41111523)
16. Collins PJ, Kotterman MJJ, Field JA, Dobson ADW. 1996. Oxidation of anthracene and benzo[a]pyrene by laccases from Trametes versicolor. Appl Environ Microbiol 62:4563-4567.
17. d'Acunzo F, Barreca AM, Galli C. 2004. Determination of the activity of laccase, and mediated oxidation of a lignin model compound, in aqueous-organic mixed solvents. J Mol Catal B: Enzym 31:25-30.
18. Dodor DE, Hwang HM, Ekunwe SIN. 2004. Oxidation of anthracene and benzo[a]pyrene by immobilized laccase from Trametes versicolor. Enzyme Microb Tech 35:210-217.
19. Galli C, Gentili P. 2004. Chemical messengers: Mediated oxidations with the enzyme laccase. J Phys Org Chem 17:973-977.
20. Gianfreda L, Xu F, Bollag J. 1999. Laccases: A useful group of oxidoreductive enzymes. Bioremediation J 3:1-25.
21. Guresir M, Aktas N, Tanyolac A. 2005. Influence of reaction conditions on the rate of enzymic polymerization of pyrogallol using laccase. Proc Biochem 40:1175-1182. (Pubitemid 39568349)
22. Johannes C, Majcherczyk A. 2000. Natural mediators in the oxidation of polycyclic aromatic hydrocarbons by laccase mediator systems. Appl Environ Microb 66:524-528. (Pubitemid 30082736)
23. Keum YS, Li QX. 2004. Fungal laccase-catalyzed degradation of hydroxy polychlorinated biphenyls. Chemosphere 56:23-30.
24. Kiiskinen LL, Saloheimo M. 2004. Molecular cloning and expression in Saccharomyces cerevisiae of a laccase gene from the ascomycete Melanocarpus albomyces. Appl Environ Microb 70:137-144. (Pubitemid 38090197)
25. Lutz S, Patrick WM. 2004. Novel methods for directed evolution of enzymes: Quality, not quantity. Curr Opin Biotech 15:291-297. (Pubitemid 39024689)
26. Majcherczyk A, Johannes C. 2000. Radical mediated indirect oxidation of a PEG-coupled polycyclic aromatic hydrocarbon (PAH) model compound by fungal laccase. BBA Gen Subj 1474:157-162. (Pubitemid 30162980)
27. Majcherczyk A, Johannes C, Huttermann A. 1998. Oxidation of polycyclic aromatic hydrocarbons (PAH) by laccase of Trametes versicolor. Enzyme Microb Tech 22:335-341. (Pubitemid 28177058)
28. Milstein O, Huttermann A, Majcherczyk A, Schulze K, Frund R, Ludemann HD. 1993. Transformation of lignin-related compounds with laccase in organic-solvents. J Biotechnol 30:37-47. (Pubitemid 23214591)
29. Nicotra S, Intra A, Ottolina G, Riva S, Danieli B. 2004. Laccase-mediated oxidation of the steroid hormone 17 beta-estradiol in organic solvents. Tetrahedr Asymmetr 15:2927-2931. (Pubitemid 39278030)
30. Parales RE, Bruce NC, Schmid A, Wackett LP. 2002. Biodegradation, biotransformation and biocatalysis (B3). Appl Environ Microbiol 68:4699-4709.
31. Qian Z, Lutz S. 2005. Improving the catalytic activity of Candida antarctica lipase B by circular permutation. J Am Chem Soc 127:13466-13467. (Pubitemid 41401178)
32. Renner R. 1999. EPA to strengthen persistent, bioaccumulative, and toxic pollutants controls - mercury first to be targeted. Environ Sci Technol 33:62.
33. Rodakiewicz-Nowak J, Kasture SM, Dudek B, Haber J. 2000. Effect of various water-miscible solvents on enzymatic activity of fungal laccases. J Mol Catal B: Enzym 11:1-11.
34. Samanta SK, Singh OV, Jain RK. 2002. Biodegradation of polycyclic aromatic hydrocarbons: Environmental pollution and bioremediation. Trends Biotechnol 20:243-248. (Pubitemid 34451059)
35. Shuttleworth KL, Cerniglia CE. 1995. Environmental aspects of PAH biodegradation. Appl Biochem Biotech 54:291-302.
36. Tao H, Cornish VW. 2002. Milestones in directed enzyme evolution. Curr Opin Chem Biol 6:858-864.
37. Thurston CF. 1994. The structure and function of fungal laccases. Microbiol UK 140:19-26.
38. Torres E, Bustos-Jaimes I, Le Borgne S. 2003. Potential use of oxidative enzymes for the detoxification of organic pollutants. Appl Catal B: Environ 46:1-15. (Pubitemid 37298581)
39. Valtcheva E, Veleva S, Radeva G, Valtchev I. 2003. Enzyme action of the laccase-mediator system in the pulp delignification process. React Kinet Catal L 78:183-191.
40. Yeom IT, Ghosh MM, Cox GM. 1996. Kinetic aspects of surfactant solubilization of soil-bound polycyclic aromatic hydrocarbons. Environ Sci Technol 30:1589-1595. (Pubitemid 27002531)