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Volumn 26, Issue 4, 2008, Pages 387-395

MMTS, a new subfamily of Tc1-like transposons

Author keywords

Direct repeat (DR); DNA transposon; Inverted repeat (IR); MMTS like transposons; Tc1 like transposon

Indexed keywords

PROTEIN MMTS; TC1 LIKE TRANSPOSASE; TRANSPOSASE; UNCLASSIFIED DRUG;

EID: 58049200248     PISSN: 10168478     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (8)

References (36)
  • 1
    • 0037331918 scopus 로고    scopus 로고
    • Rapid evolutionary divergences in reef fishes of the family Acanthuridae (Perciformes: Teleostei)
    • Clements, K.D., Gray, R.D., and Howard Choat, J. (2003). Rapid evolutionary divergences in reef fishes of the family Acanthuridae (Perciformes: Teleostei). Mol. Phylogenet. Evol. 26, 190-201.
    • (2003) Mol. Phylogenet. Evol , vol.26 , pp. 190-201
    • Clements, K.D.1    Gray, R.D.2    Howard Choat, J.3
  • 2
    • 0036317929 scopus 로고    scopus 로고
    • Structure-function analysis of the inverted terminal repeats of the Sleeping Beauty transposon
    • Cui, Z., Geurts, A.M., Liu, G., Kaufman, C.D., and Hackett, P.B. (2002). Structure-function analysis of the inverted terminal repeats of the Sleeping Beauty transposon. J. Mol. Biol. 318, 1221-1235.
    • (2002) J. Mol. Biol , vol.318 , pp. 1221-1235
    • Cui, Z.1    Geurts, A.M.2    Liu, G.3    Kaufman, C.D.4    Hackett, P.B.5
  • 3
    • 0028053230 scopus 로고
    • A proposed superfamily of transposase genes: Transposon-like elements in ciliated protozoa and a common "D35E" motif
    • Doak, T.G., Doerder, F.P., Jahn, C.L., and Herrick, G. (1994). A proposed superfamily of transposase genes: transposon-like elements in ciliated protozoa and a common "D35E" motif. Proc. Natl. Acad. Sci. USA 91, 942-946.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 942-946
    • Doak, T.G.1    Doerder, F.P.2    Jahn, C.L.3    Herrick, G.4
  • 4
    • 4143085887 scopus 로고    scopus 로고
    • Merlin, a new superfamily of DNA transposons identified in diverse animal genomes and related to bacterial IS1016 insertion sequences
    • Feschotte, C. (2004). Merlin, a new superfamily of DNA transposons identified in diverse animal genomes and related to bacterial IS1016 insertion sequences. Mol. Biol. Evol. 21, 1769-1780.
    • (2004) Mol. Biol. Evol , vol.21 , pp. 1769-1780
    • Feschotte, C.1
  • 5
    • 37549029474 scopus 로고    scopus 로고
    • DNA transposons and the evolution of eukaryotic genomes
    • Feschotte, C., and Pritham, E.J. (2007). DNA transposons and the evolution of eukaryotic genomes. Annu. Rev. Genet. 41, 331-368.
    • (2007) Annu. Rev. Genet , vol.41 , pp. 331-368
    • Feschotte, C.1    Pritham, E.J.2
  • 6
    • 0028021768 scopus 로고
    • Tc1 transposon-like sequences are widely distributed in salmonids
    • Goodier, J.L., and Davidson, W.S. (1994). Tc1 transposon-like sequences are widely distributed in salmonids. J. Mol. Biol. 241, 26-34.
    • (1994) J. Mol. Biol , vol.241 , pp. 26-34
    • Goodier, J.L.1    Davidson, W.S.2
  • 7
    • 58049192227 scopus 로고    scopus 로고
    • Hall, T.A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41, 95-98.
    • Hall, T.A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41, 95-98.
  • 8
    • 0023942622 scopus 로고
    • Sequence identity between an inverted repeat family of transposable elements in Drosophila and Caenorhabditis
    • Harris, L.J., Baillie, D.L., and Rose, A.M. (1988). Sequence identity between an inverted repeat family of transposable elements in Drosophila and Caenorhabditis. Nucleic Acids Res. 16, 5991-5998.
    • (1988) Nucleic Acids Res , vol.16 , pp. 5991-5998
    • Harris, L.J.1    Baillie, D.L.2    Rose, A.M.3
  • 9
    • 0026773556 scopus 로고
    • Presence of a member of the Tc1-like transposon family from nematodes and Drosophila within the vasotocin gene of a primitive vertebrate, the Pacific hagfish Eptatretus stouti
    • Heierhorst, J., Lederis, K., and Richter, D. (1992). Presence of a member of the Tc1-like transposon family from nematodes and Drosophila within the vasotocin gene of a primitive vertebrate, the Pacific hagfish Eptatretus stouti. Proc. Natl. Acad. Sci. USA 89, 6798-6802.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 6798-6802
    • Heierhorst, J.1    Lederis, K.2    Richter, D.3
  • 10
    • 0026843161 scopus 로고
    • Detection of Caenorhabditis transposon homologs in diverse organisms
    • Henikoff, S. (1992). Detection of Caenorhabditis transposon homologs in diverse organisms. New Biol. 4, 382-388.
    • (1992) New Biol , vol.4 , pp. 382-388
    • Henikoff, S.1
  • 11
    • 0029557842 scopus 로고
    • Protein import into the nucleus: An integrated view
    • Hicks, G.R., and Raikhel, N.V. (1995). Protein import into the nucleus: an integrated view. Annu. Rev. Cell Dev. Biol. 11, 155-188.
    • (1995) Annu. Rev. Cell Dev. Biol , vol.11 , pp. 155-188
    • Hicks, G.R.1    Raikhel, N.V.2
  • 12
    • 0030624540 scopus 로고    scopus 로고
    • Better prediction of protein cellular localization sites with the k nearest neighbors classifier
    • Horton, P., and Nakai, K. (1997). Better prediction of protein cellular localization sites with the k nearest neighbors classifier. Proc. Int. Conf. Intell. Syst. Mol. Biol. 5, 147-152.
    • (1997) Proc. Int. Conf. Intell. Syst. Mol. Biol , vol.5 , pp. 147-152
    • Horton, P.1    Nakai, K.2
  • 14
    • 0029895619 scopus 로고    scopus 로고
    • Identification of functional domains and evolution of Tc1-like transposable elements
    • Ivics, Z., Izsvák, Z., Minter, A., and Hackett, P.B. (1996). Identification of functional domains and evolution of Tc1-like transposable elements. Proc. Natl. Acad. Sci. USA 93, 5008-5013.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 5008-5013
    • Ivics, Z.1    Izsvák, Z.2    Minter, A.3    Hackett, P.B.4
  • 15
    • 0030662074 scopus 로고    scopus 로고
    • Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells
    • Ivics, Z., Hackett, P.B., Plasterk, R.H., and Izsvák, Z. (1997). Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells. Cell 91, 501-510.
    • (1997) Cell , vol.91 , pp. 501-510
    • Ivics, Z.1    Hackett, P.B.2    Plasterk, R.H.3    Izsvák, Z.4
  • 16
    • 0029063739 scopus 로고
    • Characterization of a Tc1-like transposable element in zebrafish (Danio rerio
    • Izsvák, Z., Ivics, Z., and Hackett, P.B. (1995). Characterization of a Tc1-like transposable element in zebrafish (Danio rerio. Mol. Gen. Genet. 247, 312-322.
    • (1995) Mol. Gen. Genet , vol.247 , pp. 312-322
    • Izsvák, Z.1    Ivics, Z.2    Hackett, P.B.3
  • 17
    • 0011704558 scopus 로고
    • Molecular structure of a somatically unstable transposable element in Drosophila
    • Jacobson, J.W., Medhora, M.M., and Hartl, D.L. (1986). Molecular structure of a somatically unstable transposable element in Drosophila. Proc. Natl. Acad. Sci. USA 83, 8684-8688.
    • (1986) Proc. Natl. Acad. Sci. USA , vol.83 , pp. 8684-8688
    • Jacobson, J.W.1    Medhora, M.M.2    Hartl, D.L.3
  • 18
    • 0033288597 scopus 로고    scopus 로고
    • Molecular paleontology of transposable elements from Arabidopsis thaliana
    • Kapitonov, V.V., and Jurka, J. (1999). Molecular paleontology of transposable elements from Arabidopsis thaliana. Genetica 107, 27-37.
    • (1999) Genetica , vol.107 , pp. 27-37
    • Kapitonov, V.V.1    Jurka, J.2
  • 20
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K., and Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform. 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 21
    • 0029923429 scopus 로고    scopus 로고
    • Discovery of amphibian Tc1-like transposon families
    • Lam, W.L., Seo, P., Robison, K., Virk, S., and Gilbert, W. (1996). Discovery of amphibian Tc1-like transposon families. J. Mol. Biol. 257, 359-366.
    • (1996) J. Mol. Biol , vol.257 , pp. 359-366
    • Lam, W.L.1    Seo, P.2    Robison, K.3    Virk, S.4    Gilbert, W.5
  • 22
    • 0035958286 scopus 로고    scopus 로고
    • A family of Tc1-like transposons from the genomes of fishes and frogs: Evidence for horizontal transmission
    • Leaver, M.J. (2001). A family of Tc1-like transposons from the genomes of fishes and frogs: evidence for horizontal transmission. Gene 271, 203-214.
    • (2001) Gene , vol.271 , pp. 203-214
    • Leaver, M.J.1
  • 23
    • 0037198175 scopus 로고    scopus 로고
    • Molecular cloning and characterization of ARS elements from the mud loach (Misgurnus mizolepis)
    • Lim, H.S., Kim, M.S., Park, J.Y., Choi, K.E., Hwang, J.Y., Kim, D.S., and Lee, H.H. (2002). Molecular cloning and characterization of ARS elements from the mud loach (Misgurnus mizolepis). Mol. Cells 13, 185-193.
    • (2002) Mol. Cells , vol.13 , pp. 185-193
    • Lim, H.S.1    Kim, M.S.2    Park, J.Y.3    Choi, K.E.4    Hwang, J.Y.5    Kim, D.S.6    Lee, H.H.7
  • 24
    • 0028815959 scopus 로고
    • Horizontal transmission, vertical inactivation, and stochastic loss of mariner-like transposable elements
    • Lohe, A.R., Moriyama, E.N., Lidholm, D.A., and Hartl, D.L. (1995). Horizontal transmission, vertical inactivation, and stochastic loss of mariner-like transposable elements. Mol. Biol. Evol. 12, 62-72.
    • (1995) Mol. Biol. Evol , vol.12 , pp. 62-72
    • Lohe, A.R.1    Moriyama, E.N.2    Lidholm, D.A.3    Hartl, D.L.4
  • 25
    • 0345320434 scopus 로고    scopus 로고
    • Transmission and expression of an integrated reporter construct up to three generations in transgenic mud loach, Misgurnus mizolepis
    • Nam, Y.K., Noh, C.H., and Kim, D.S. (1999). Transmission and expression of an integrated reporter construct up to three generations in transgenic mud loach, Misgurnus mizolepis. Aquaculture 172, 229-245.
    • (1999) Aquaculture , vol.172 , pp. 229-245
    • Nam, Y.K.1    Noh, C.H.2    Kim, D.S.3
  • 26
    • 0037189649 scopus 로고    scopus 로고
    • Accelerated growth performance and stable germ-line transmission in androgenetically derived homozygous transgenic mud loach, Misgurnus mizolepis
    • Nam, Y.K., Cho, Y.S., Cho, H.J., and Kim, D.S. (2002). Accelerated growth performance and stable germ-line transmission in androgenetically derived homozygous transgenic mud loach, Misgurnus mizolepis. Aquaculture 209, 257-270.
    • (2002) Aquaculture , vol.209 , pp. 257-270
    • Nam, Y.K.1    Cho, Y.S.2    Cho, H.J.3    Kim, D.S.4
  • 27
    • 0033179759 scopus 로고    scopus 로고
    • Resident aliens: The Tc1/mariner superfamily of transposable elements
    • Plasterk, R.H., Izsvak, Z., and Ivics, Z. (1999). Resident aliens: the Tc1/mariner superfamily of transposable elements. Trends Genet. 15, 326-332.
    • (1999) Trends Genet , vol.15 , pp. 326-332
    • Plasterk, R.H.1    Izsvak, Z.2    Ivics, Z.3
  • 28
    • 0027997939 scopus 로고
    • Widespread occurrence of the Tc1 transposon family: Tc1-like transposons from teleost fish
    • Radice, A.D., Bugaj, B., Fitch, D.H., and Emmons, S.W. (1994). Widespread occurrence of the Tc1 transposon family: Tc1-like transposons from teleost fish. Mol. Gen. Genet. 244, 606-612.
    • (1994) Mol. Gen. Genet , vol.244 , pp. 606-612
    • Radice, A.D.1    Bugaj, B.2    Fitch, D.H.3    Emmons, S.W.4
  • 29
    • 0029137823 scopus 로고
    • The Tc1-mariner superfamily of transposons in animals
    • Robertson, H.M. (1995). The Tc1-mariner superfamily of transposons in animals. J. Insect Physiol. 41, 99-105.
    • (1995) J. Insect Physiol , vol.41 , pp. 99-105
    • Robertson, H.M.1
  • 30
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 31
    • 0035679808 scopus 로고    scopus 로고
    • Expanding the diversity of the IS630-Tc1-mariner superfamily: Discovery of a unique DD37E transposon and reclassification of the DD37D and DD39D transposons
    • Shao, H., and Tu, Z. (2001). Expanding the diversity of the IS630-Tc1-mariner superfamily: discovery of a unique DD37E transposon and reclassification of the DD37D and DD39D transposons. Genetics 159, 1103-1115.
    • (2001) Genetics , vol.159 , pp. 1103-1115
    • Shao, H.1    Tu, Z.2
  • 32
    • 33646672661 scopus 로고    scopus 로고
    • Fish transposons and their potential use in aquaculture
    • Tafalla, C., Estepa, A., and Coll, J.M. (2006). Fish transposons and their potential use in aquaculture. J. Biotechnol. 123, 397-412.
    • (2006) J. Biotechnol , vol.123 , pp. 397-412
    • Tafalla, C.1    Estepa, A.2    Coll, J.M.3
  • 33
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G., and Gibson, T.J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 34
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G. (1997). The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 35
    • 0028090258 scopus 로고
    • The mechanism of transposition Tc3 of C. elegans
    • van Luenen, H.G., Colloms, S.D., and Plasterk, R.H. (1994). The mechanism of transposition Tc3 of C. elegans. Cell 79, 293-301.
    • (1994) Cell , vol.79 , pp. 293-301
    • van Luenen, H.G.1    Colloms, S.D.2    Plasterk, R.H.3
  • 36
    • 0028598507 scopus 로고
    • Tc1 transposase of Caenorhabditis elegans is an endonuclease with a bipartite DNA binding domain
    • Vos, J.C., and Plasterk, R.H. (1994). Tc1 transposase of Caenorhabditis elegans is an endonuclease with a bipartite DNA binding domain. EMBO J. 13, 6125-6132.
    • (1994) EMBO J , vol.13 , pp. 6125-6132
    • Vos, J.C.1    Plasterk, R.H.2


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