Expanding the diversity of the IS630-Tc1-mariner superfamily: Discovery of a unique DD37E transposon and reclassification of the DD37D and DD39D transposons

Genetics

Volumn 159, Issue 3, 2001, Pages 1103-1115

  Shao, Hongguang ^a   Tu, Zhijian ^a  

^a VIRGINIA POLYTECHNIC INSTITUTE AND STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIODIVERSITY; MOSQUITO; MUTAGENESIS; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; PRIORITY JOURNAL; PROTEIN FAMILY; SEQUENCE ANALYSIS; SPECIES DIFFERENCE; STRUCTURE ACTIVITY RELATION; TRANSGENE; TRANSPOSON;

AMINO ACID MOTIFS; AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CATALYTIC DOMAIN; CLONING, MOLECULAR; CONSERVED SEQUENCE; CULICIDAE; DNA TRANSPOSABLE ELEMENTS; DNA-BINDING PROTEINS; GENOME; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; MUTAGENESIS; PHYLOGENY; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID; TRANSPOSASES;

ARACHNIDA; HEXAPODA; TRANSPOSONS;

EID: 0035679808     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (36)

1. Gapped Blast and PSI-Blast: A new generation of protein database search programs
2. Prospects for the genetic transformation of arthropods
3. Genetic transformation systems in insects
4. Reassociation kinetics of Anopheles gambiae (Diptera: Culicidae) DNA
5. Relationships between transposable elements based upon the integrase-transposase domains: Is there a common ancestor?
6. Do the integrases of LTR-retrotransposons and class II element transposases have a common ancestor?
7. A phylogenetic perspective on P transposable element evolution in Drosophila
8. The Tc3 family of transposable genetic elements in Caenorhabditis elegans
9. A proposed superfamily of transposase genes: Transposon-like elements in ciliated protozoa and a common "D35E" motif
10. Selfish genes, the phenotype paradigm and genome evolution
11. Is there something wrong with the bootstrap on phylogenies? A reply to Hillis and Bull
12. Trans-kingdom transposition of the Drosophila element mariner within the protozoan Leishmania
13. Detection of Caenorhabditis transposon homologs in diverse organisms
14. Sleeping Beauty, a wide host-range transposon vector for genetic transformation in vertebrates
15. Characterization of Soymar1, a mariner element in soybean
16. Transposable elements and host genome evolution
17. Hyperactive transposase mutants of the Himar1 mariner transposon
18. Loss of transposase-DNA interaction may underlie the divergence of mariner family transposable elements and the ability of more than one mariner to occupy the same genome
19. Mutations in the mariner transposase: The D,D(35)E consensus sequence is nonfunctional
20. Isolation of the transposable element hupfer from the entomopathogenic fungus Beouveria bassiana by insertion mutagenesis of the nitrate reductase structural gene
21. Substrate specificity, of Ty1 integrase
22. A whole-genome assembly of Drosophila
23. Resident aliens the Tc1/mariner superfamily of transposable elements
24. Mosquito genomes: Structure, organization, and evolution
25. Transposition of the nematode Caenorhabditis elegans Tc3 element in the zebrafish Danio rerio
26. The Tc1-mariner superfamily of transposons in animals
27. Bmmar1: A basal lineage of the mariner family of transposable elements in the silkworm moth, Bombyx mori
28. Five major subfamilies of mariner transposable elements in insects, including the Mediterranean fruit fly, and related arthropods
29. Tiggers and other DNA transposon fossils in the human genome
30. The complete sequence of 340 kb of DNA around the rice Adh1-adh2 region reveals interrupted colinearity with maize chromosome 4
31. CLUSTALW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
32. Molecular and evolutionary analysis of two divergent subfamilies of a novel miniature inverted repeat transposable element in the yellow fever mosquito, Aedes aegypti
33. Biochemical, molecular, and phylogenetic analysis of pyruvate carboxylase in the yellow fever mosquito, Aedes aegypti
34. MosquI, a novel family of mosquito retrotransposons distantly related to the Drosophila I factors, may consist of elements of more than one origin