Genetic composition of Pepino mosaic virus population in North American greenhouse tomatoes

Plant Disease

Volumn 92, Issue 12, 2008, Pages 1683-1688

  Ling, Kai Shu ^a   Wintermantel, William M ^a   Bledsoe, Michael ^b  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b Village Farms   (United States)

Author keywords

Potexvirus; Solanum lycopersicum; Solanum muricatum

Indexed keywords

GREENHOUSES; NUCLEIC ACIDS; VIRUSES;

ALABAMA; ARIZONA; BRITISH COLUMBIA; CALIFORNIA; CDNA CLONES; DO-MAINS; GENETIC VARIABILITIES; GENOMIC REGIONS; GREENHOUSE TOMATOES; HELICASE; MIXED INFECTIONS; MOSAIC VIRUSES; NORTH AMERICA; NUCLEOTIDE SEQUENCES; ONTARIO; PHYLOGENETIC ANALYSES; POPULATION GENETICS; POPULATION STRUCTURES; POTEXVIRUS; SOLANUM LYCOPERSICUM; SOLANUM MURICATUM; TOMATO CULTIVARS; UNITED STATES;

FRUITS;

LYCOPERSICON ESCULENTUM; PEPINO MOSAIC VIRUS; POTEXVIRUS; SOLANUM; SOLANUM MURICATUM;

EID: 57549116212     PISSN: 01912917     EISSN: None     Source Type: Journal    
DOI: 10.1094/PDIS-92-12-1683     Document Type: Article

References (25)

1. Aguilar, J. M., Hernandez-Gallardo, M. D., Cenis, J. L., Lacasa, A., and Aranda, M. A. 2002. Complete sequence of the Pepino mosaic virus RNA genome. Arch. Virol. 147:2009-2015.
2. Cordoba-Selles, M. C., Garcia-Randez, A., Alfaro-Fernandez, A., and Jorda-Gutierrez, C. 2007. Seed transmission of Pepino mosaic virus and efficacy of tomato seed disinfection treatments. Plant Dis. 91:1250-1254.
3. Cotillon, A. C., Girard, M., and Ducouret, S. 2002. Complete nucleotide sequence of the genomic RNA of a French isolate of Pepino mosaic virus (PepMV). Arch. Virol. 147:2231-2238.
4. French, C. J., Bouthillier, M., Bernardy, M., Ferguson, G., Sabourin, M., Johnson, R.C., Masters, C., Godkin, S., and Mumford, R. 2001. First report of Pepino mosaic virus in Canada and the United States. Plant Dis. 85:1121.
5. Hanssen, I. M., Paeleman, A., Wittemans, L., Goen, K., Lievens, B., Bragard, C., Vanachter, A. C. R. C., and Thomma, B. P. H. 2008. Genetic characterization of Pepino mosaic virus isolates from Belgian greenhouse tomatoes reveals genetic recombination. Eur. J. Plant Pathol. 121:131-146.
6. Hasiow, B., Borodynko, N., and Pospieszny, H. 2008. Complete genomic RNA sequence of the Polish Pepino mosaic virus isolate belonging to the US2 strain. Virus Genes 36: 209-214.
7. Jones, R. A. C., Koenig, R., and Lesemann, D. E. 1980. Pepino mosaic virus, a new potexvirus from pepino Solanum muricatum. Ann. Appl. Biol. 94:61-68.
8. Jorda, C., Lazaro-Perez, A., Martinez-Culebras, P. V., Abad, P., Lacasa, A., and Guerrero, M. M. 2001. First report of Pepino mosaic virus on tomato in Spain. Plant Dis. 85:1292.
9. Ling, K. S. 2007. Molecular characterization of two Pepino mosaic virus variants from imported tomato seed reveals high levels of sequence identity between Chilean and US isolates. Virus Genes 34:1-8.
10. Ling, K. S., and Scott, J. W. 2007. Sources of resistance to Pepino mosaic virus in tomato accessions. Plant Dis. 91:749-753.
11. Ling, K. S., Wechter, W. P., and Jordan, R. 2007. Development of a one-step immunocapture real-time TaqMan RT-PCR assay for the broad spectrum detection of Pepino mosaic virus. J. Virol. Methods 144:65-72.
12. Lopez, C., Soler, S., and Nuez, F. 2005. Comparison of the complete sequences of three different isolates of Pepino mosaic virus: Size variability of the TGBp3 protein between tomato and L. peruvianum isolates. Arch. Virol. 150:619-627.
13. Maroon-Lango, C. J., Guaragna, M. A., Jordan, R. L., Hammond, J., Bandla, M., and Marquardt, S. K. 2005. Two unique US isolates of Pepino mosaic virus from a limited source of pooled tomato tissue are distinct from a third (European-like) US isolate. Arch. Virol. 150:1187-1201.
14. Mumford, R. A., and Metcalfe, E. J. 2001. The partial sequencing of the genomic RNA of a UK isolate of Pepino mosaic virus and the comparison of the coat protein sequence with other isolates from Europe and Peru. Arch. Virol. 146:2455-2460.
15. Pagan, I., Cordoba-Selles, M. C., Martinez-Priego, L., Fraile, A., Malpica, J. M., Jorda, C., and Garcia-Arenal, F. 2006. Genetic structure of the population of Pepino mosaic virus infecting tomato crops in Spain. Phytopathology 96:274-279.
16. Pospieszny, H., and Borodynko, N. 2006. New Polish isolate of Pepino mosaic virus highly distinct from European tomato, Peruvian, and US2 strains. Plant Dis. 90:1106.
17. Roggero, P., Masenga, V., Lenzi, R., Coghe, F., Ena, S., and Winter, S. 2001. First report of Pepino mosaic virus in tomato in Italy. Plant Pathol. 50:798.
18. Saitou, N., and Nei, M. 1987. The neighbor joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
19. Salomone, A., and Roggero, P. 2002. Host range, seed transmission and detection by ELISA and lateral flow of an Italian isolate of Pepino mosaic virus. J. Plant Pathol. 84:65-68.
20. Soler, S., Prohens, J., Diez, M. J., and Nuez, F. 2002. Natural occurrence of Pepino mosaic virus in Lycopersicon species in Central and Southern Peru. J. Phytopathol. 150:49-53.
21. Soler-Aleixandre, S., Lopez, C., Cebolla-Cornejo, J., and Nuez, F. 2007. Sources of resistance to Pepino mosaic virus (PepMV) in tomato. HortScience 42:40-45.
22. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F., and Higgins, D. G. 1997. The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-4882.
23. van der Vlugt, R. A. A., Stijger, C. C. M. M., Verhoeven, J. Th. J., and Lesemann, D. E. 2000. First report of Pepino mosaic virus on tomato. Plant Dis. 84:103.
24. Verhoeven, J. Th. J., van der Vlugt, R. A. A., and Roenhorst, J. W. 2003. High similarity between tomato isolates of Pepino mosaic virus suggests a common origin. Eur. J. Plant Pathol. 109:419-425.
25. Zhang, Y., Shen, Z. J., Zhong, J., Lu, X. L., Cheng, G., and Li, R. D. 2003. Preliminary characterization of Pepino mosaic virus Shanghai isolate (PepMV-Sh) and its detection with ELISA. Acta Agric. Shanghai 19:90-92.