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Volumn 56, Issue 6, 2008, Pages 903-912

Maternal and paternal alleles exhibit differential histone methylation and acetylation at maize imprinted genes

Author keywords

Chromatin immunoprecipitation; Histone modification; Imprinting; Maize

Indexed keywords

HISTONE; PLANT DNA;

EID: 57549111248     PISSN: 09607412     EISSN: 1365313X     Source Type: Journal    
DOI: 10.1111/j.1365-313X.2008.03649.x     Document Type: Article
Times cited : (36)

References (43)
  • 1
    • 33745127746 scopus 로고    scopus 로고
    • Dynamic regulatory interactions of polycomb group genes: MEDEA autoregulation is required for imprinted gene expression in arabidopsis
    • Baroux, C., Gagliardini, V., Page, D.R. Grossniklaus, U. (2006) Dynamic regulatory interactions of polycomb group genes: MEDEA autoregulation is required for imprinted gene expression in arabidopsis. Genes Dev. 20 (9 1081 1086.
    • (2006) Genes Dev. , vol.20 , Issue.9 , pp. 1081-1086
    • Baroux, C.1    Gagliardini, V.2    Page, D.R.3    Grossniklaus, U.4
  • 2
    • 0037295688 scopus 로고    scopus 로고
    • Endosperm: The crossroad of seed development
    • Berger, F. (2003) Endosperm: the crossroad of seed development. Curr. Opin. Plant Biol. 6 (1 42 50.
    • (2003) Curr. Opin. Plant Biol. , vol.6 , Issue.1 , pp. 42-50
    • Berger, F.1
  • 3
    • 33846028236 scopus 로고    scopus 로고
    • Allele-specific histone modifications regulate expression of the Dlk1-Gtl2 imprinted domain
    • Carr, M.S., Yevtodiyenko, A., Schmidt, C.L. Schmidt, J.V. (2007) Allele-specific histone modifications regulate expression of the Dlk1-Gtl2 imprinted domain. Genomics, 89 (2 280 290.
    • (2007) Genomics , vol.89 , Issue.2 , pp. 280-290
    • Carr, M.S.1    Yevtodiyenko, A.2    Schmidt, C.L.3    Schmidt, J.V.4
  • 4
    • 48549087565 scopus 로고    scopus 로고
    • Histone acetylation and chromatin remodeling are required for UV-B-dependent transcriptional activation of regulated genes in maize
    • Casati, P., Campi, M., Chu, F., Suzuki, N., Maltby, D., Guan, S., Burlingame, A.L. Walbot, V. (2008) Histone acetylation and chromatin remodeling are required for UV-B-dependent transcriptional activation of regulated genes in maize. Plant Cell, 20 (4 827 842.
    • (2008) Plant Cell , vol.20 , Issue.4 , pp. 827-842
    • Casati, P.1    Campi, M.2    Chu, F.3    Suzuki, N.4    Maltby, D.5    Guan, S.6    Burlingame, A.L.7    Walbot, V.8
  • 5
    • 33751045998 scopus 로고    scopus 로고
    • Two-step recruitment of RNA-directed DNA methylation to tandem repeats
    • Chan, S.W., Zhang, X., Bernatavichute, Y.V. Jacobsen, S.E. (2006) Two-step recruitment of RNA-directed DNA methylation to tandem repeats. PLoS Biol. 4 (11 e363.
    • (2006) PLoS Biol. , vol.4 , Issue.11
    • Chan, S.W.1    Zhang, X.2    Bernatavichute, Y.V.3    Jacobsen, S.E.4
  • 6
    • 0037067658 scopus 로고    scopus 로고
    • DEMETER, a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in arabidopsis
    • Choi, Y., Gehring, M., Johnson, L., Hannon, M., Harada, J.J., Goldberg, R.B., Jacobsen, S.E. Fischer, R.L. (2002) DEMETER, a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in arabidopsis. Cell, 110 (1 33 42.
    • (2002) Cell , vol.110 , Issue.1 , pp. 33-42
    • Choi, Y.1    Gehring, M.2    Johnson, L.3    Hannon, M.4    Harada, J.J.5    Goldberg, R.B.6    Jacobsen, S.E.7    Fischer, R.L.8
  • 7
    • 2442595063 scopus 로고    scopus 로고
    • An invariant aspartic acid in the DNA glycosylase domain of DEMETER is necessary for transcriptional activation of the imprinted MEDEA gene
    • Choi, Y., Harada, J.J., Goldberg, R.B. Fischer, R.L. (2004) An invariant aspartic acid in the DNA glycosylase domain of DEMETER is necessary for transcriptional activation of the imprinted MEDEA gene. Proc. Natl Acad. Sci. USA, 101 (19 7481 7486.
    • (2004) Proc. Natl Acad. Sci. USA , vol.101 , Issue.19 , pp. 7481-7486
    • Choi, Y.1    Harada, J.J.2    Goldberg, R.B.3    Fischer, R.L.4
  • 8
    • 0037131523 scopus 로고    scopus 로고
    • Drosophila enhancer of Zeste/ESC complexes have a histone H3 methyltransferase activity that marks chromosomal polycomb sites
    • Czermin, B., Melfi, R., McCabe, D., Seitz, V., Imhof, A. Pirrotta, V. (2002) Drosophila enhancer of Zeste/ESC complexes have a histone H3 methyltransferase activity that marks chromosomal polycomb sites. Cell, 111 (2 185 196.
    • (2002) Cell , vol.111 , Issue.2 , pp. 185-196
    • Czermin, B.1    Melfi, R.2    McCabe, D.3    Seitz, V.4    Imhof, A.5    Pirrotta, V.6
  • 9
    • 0037326955 scopus 로고    scopus 로고
    • Duplicated fie genes in maize: Expression pattern and imprinting suggest distinct functions
    • Danilevskaya, O.N., Hermon, P., Hantke, S., Muszynski, M.G., Kollipara, K. Ananiev, E.V. (2003) Duplicated fie genes in maize: expression pattern and imprinting suggest distinct functions. Plant Cell, 15 (2 425 438.
    • (2003) Plant Cell , vol.15 , Issue.2 , pp. 425-438
    • Danilevskaya, O.N.1    Hermon, P.2    Hantke, S.3    Muszynski, M.G.4    Kollipara, K.5    Ananiev, E.V.6
  • 10
    • 34047093266 scopus 로고    scopus 로고
    • Convergent evolution of genomic imprinting in plants and mammals
    • Feil, R. Berger, F. (2007) Convergent evolution of genomic imprinting in plants and mammals. Trends Genet. 23 (4 192 199.
    • (2007) Trends Genet. , vol.23 , Issue.4 , pp. 192-199
    • Feil, R.1    Berger, F.2
  • 11
    • 32044470027 scopus 로고    scopus 로고
    • DEMETER DNA glycosylase establishes MEDEA polycomb gene self-imprinting by allele-specific demethylation
    • Gehring, M., Huh, J.H., Hsieh, T.F., Penterman, J., Choi, Y., Harada, J.J., Goldberg, R.B. Fischer, R.L. (2006) DEMETER DNA glycosylase establishes MEDEA polycomb gene self-imprinting by allele-specific demethylation. Cell, 124 (3 495 506.
    • (2006) Cell , vol.124 , Issue.3 , pp. 495-506
    • Gehring, M.1    Huh, J.H.2    Hsieh, T.F.3    Penterman, J.4    Choi, Y.5    Harada, J.J.6    Goldberg, R.B.7    Fischer, R.L.8
  • 12
    • 0042528729 scopus 로고    scopus 로고
    • Heterochromatin and epigenetic control of gene expression
    • Grewal, S.I. Moazed, D. (2003) Heterochromatin and epigenetic control of gene expression. Science, 301 (5634 798 802.
    • (2003) Science , vol.301 , Issue.5634 , pp. 798-802
    • Grewal, S.I.1    Moazed, D.2
  • 13
    • 31644431958 scopus 로고    scopus 로고
    • Genomic imprinting in plants: A predominantly maternal affair
    • In. Meyer, P., Ed.). Oxford: Blackwell Publishing, pp.
    • Grossniklaus, U. (2005) Genomic imprinting in plants: a predominantly maternal affair. In Plant Epigenetics (Meyer, P., Ed.). Oxford : Blackwell Publishing, pp. 174 200.
    • (2005) Plant Epigenetics , pp. 174-200
    • Grossniklaus, U.1
  • 14
    • 0032540508 scopus 로고    scopus 로고
    • Maternal control of embryogenesis by MEDEA, a polycomb group gene in arabidopsis
    • Grossniklaus, U., Vielle-Calzada, J.P., Hoeppner, M.A. Gagliano, W.B. (1998) Maternal control of embryogenesis by MEDEA, a polycomb group gene in arabidopsis. Science, 280 (5362 446 450.
    • (1998) Science , vol.280 , Issue.5362 , pp. 446-450
    • Grossniklaus, U.1    Vielle-Calzada, J.P.2    Hoeppner, M.A.3    Gagliano, W.B.4
  • 15
    • 0141872967 scopus 로고    scopus 로고
    • Genome-wide mRNA profiling reveals heterochronic allelic variation and a new imprinted gene in hybrid maize endosperm
    • Guo, M., Rupe, M.A., Danilevskaya, O.N., Yang, X. Hu, Z. (2003) Genome-wide mRNA profiling reveals heterochronic allelic variation and a new imprinted gene in hybrid maize endosperm. Plant J. 36, 30 44.
    • (2003) Plant J. , vol.36 , pp. 30-44
    • Guo, M.1    Rupe, M.A.2    Danilevskaya, O.N.3    Yang, X.4    Hu, Z.5
  • 18
    • 36248953882 scopus 로고    scopus 로고
    • Chromatin immunoprecipitation: Optimization, quantitative analysis and data normalization
    • Haring, M., Offermann, S., Danker, T., Horst, I., Peterhansel, C. Stam, M. (2007) Chromatin immunoprecipitation: optimization, quantitative analysis and data normalization. Plant. Methods, 3, 11.
    • (2007) Plant. Methods , vol.3 , pp. 11
    • Haring, M.1    Offermann, S.2    Danker, T.3    Horst, I.4    Peterhansel, C.5    Stam, M.6
  • 20
    • 34249807934 scopus 로고    scopus 로고
    • Activation of the imprinted polycomb group Fie1 gene in maize endosperm requires demethylation of the maternal allele
    • Hermon, P., Srilunchang, K.O., Zou, J., Dresselhaus, T. Danilevskaya, O.N. (2007) Activation of the imprinted polycomb group Fie1 gene in maize endosperm requires demethylation of the maternal allele. Plant Mol. Biol. 64 (4 387 395.
    • (2007) Plant Mol. Biol. , vol.64 , Issue.4 , pp. 387-395
    • Hermon, P.1    Srilunchang, K.O.2    Zou, J.3    Dresselhaus, T.4    Danilevskaya, O.N.5
  • 23
    • 33745458520 scopus 로고    scopus 로고
    • Maintenance of DNA methylation during the arabidopsis life cycle is essential for parental imprinting
    • Jullien, P.E., Kinoshita, T., Ohad, N. Berger, F. (2006a) Maintenance of DNA methylation during the arabidopsis life cycle is essential for parental imprinting. Plant Cell, 18 (6 1360 1372.
    • (2006) Plant Cell , vol.18 , Issue.6 , pp. 1360-1372
    • Jullien, P.E.1    Kinoshita, T.2    Ohad, N.3    Berger, F.4
  • 24
    • 33644771066 scopus 로고    scopus 로고
    • Polycomb group complexes self-regulate imprinting of the polycomb group gene MEDEA in arabidopsis
    • Jullien, P.E., Katz, A., Oliva, M., Ohad, N. Berger, F. (2006b) Polycomb group complexes self-regulate imprinting of the polycomb group gene MEDEA in arabidopsis. Curr. Biol. 16 (5 486 492.
    • (2006) Curr. Biol. , vol.16 , Issue.5 , pp. 486-492
    • Jullien, P.E.1    Katz, A.2    Oliva, M.3    Ohad, N.4    Berger, F.5
  • 25
    • 17044386536 scopus 로고    scopus 로고
    • A single nucleotide polymorphism based approach for the identification and characterization of gene expression modulation using MassARRAY
    • Jurinke, C., Denissenko, M.F., Oeth, P., Ehrich, M., van den Boom, D. Cantor, C.R. (2005) A single nucleotide polymorphism based approach for the identification and characterization of gene expression modulation using MassARRAY. Mutat. Res. 573 (1-2 83 95.
    • (2005) Mutat. Res. , vol.573 , Issue.1-2 , pp. 83-95
    • Jurinke, C.1    Denissenko, M.F.2    Oeth, P.3    Ehrich, M.4    Van Den Boom, D.5    Cantor, C.R.6
  • 26
    • 0033213025 scopus 로고    scopus 로고
    • Imprinting of the MEDEA polycomb gene in the arabidopsis endosperm
    • Kinoshita, T., Yadegari, R., Harada, J.J., Goldberg, R.B. Fischer, R.L. (1999) Imprinting of the MEDEA polycomb gene in the arabidopsis endosperm. Plant Cell, 11 (10 1945 1952.
    • (1999) Plant Cell , vol.11 , Issue.10 , pp. 1945-1952
    • Kinoshita, T.1    Yadegari, R.2    Harada, J.J.3    Goldberg, R.B.4    Fischer, R.L.5
  • 28
    • 33845621109 scopus 로고    scopus 로고
    • Control of FWA gene silencing in arabidopsis thaliana by SINE-related direct repeats
    • Kinoshita, Y., Saze, H., Kinoshita, T., Miura, A., Soppe, W.J., Koornneef, M. Kakutani, T. (2007) Control of FWA gene silencing in arabidopsis thaliana by SINE-related direct repeats. Plant J. 49 (1 38 45.
    • (2007) Plant J. , vol.49 , Issue.1 , pp. 38-45
    • Kinoshita, Y.1    Saze, H.2    Kinoshita, T.3    Miura, A.4    Soppe, W.J.5    Koornneef, M.6    Kakutani, T.7
  • 29
    • 0037085973 scopus 로고    scopus 로고
    • Mouse parthenogenetic embryos with monoallelic H19 expression can develop to day 17.5 of gestation
    • Kono, T., Sotomaru, Y., Katsuzawa, Y. Dandolo, L. (2002) Mouse parthenogenetic embryos with monoallelic H19 expression can develop to day 17.5 of gestation. Dev. Biol. 243 (2 294 300.
    • (2002) Dev. Biol. , vol.243 , Issue.2 , pp. 294-300
    • Kono, T.1    Sotomaru, Y.2    Katsuzawa, Y.3    Dandolo, L.4
  • 33
    • 0037355216 scopus 로고    scopus 로고
    • Chromatin immunoprecipitation reveals that the 180-bp satellite repeat is the key functional DNA element of arabidopsis thaliana centromeres
    • Nagaki, K., Talbert, P.B., Zhong, C.X., Dawe, R.K., Henikoff, S. Jiang, J. (2003) Chromatin immunoprecipitation reveals that the 180-bp satellite repeat is the key functional DNA element of arabidopsis thaliana centromeres. Genetics, 163 (3 1221 1225.
    • (2003) Genetics , vol.163 , Issue.3 , pp. 1221-1225
    • Nagaki, K.1    Talbert, P.B.2    Zhong, C.X.3    Dawe, R.K.4    Henikoff, S.5    Jiang, J.6
  • 34
    • 0035815360 scopus 로고    scopus 로고
    • Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly
    • Nakayama, J., Rice, J.C., Strahl, B.D., Allis, C.D. Grewal, S.I. (2001) Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly. Science, 292 (5514 110 113.
    • (2001) Science , vol.292 , Issue.5514 , pp. 110-113
    • Nakayama, J.1    Rice, J.C.2    Strahl, B.D.3    Allis, C.D.4    Grewal, S.I.5
  • 35
    • 6044256118 scopus 로고    scopus 로고
    • Histones and histone modifications
    • Peterson, C.L. Laniel, M.A. (2004) Histones and histone modifications. Curr. Biol. 14 (14 R546 R551.
    • (2004) Curr. Biol. , vol.14 , Issue.14
    • Peterson, C.L.1    Laniel, M.A.2
  • 36
    • 34249825181 scopus 로고    scopus 로고
    • Polycomb group and trithorax group proteins in arabidopsis
    • Pien, S. Grossniklaus, U. (2007) Polycomb group and trithorax group proteins in arabidopsis. Biochim. Biophys. Acta 1769 (5-6 375 382.
    • (2007) Biochim. Biophys. Acta , vol.1769 , Issue.5-6 , pp. 375-382
    • Pien, S.1    Grossniklaus, U.2
  • 37
    • 23944462969 scopus 로고    scopus 로고
    • Genome-wide map of nucleosome acetylation and methylation in yeast
    • Pokholok, D.K., Harbison, C.T., Levine, S. et al. (2005) Genome-wide map of nucleosome acetylation and methylation in yeast. Cell, 122 (4 517 527.
    • (2005) Cell , vol.122 , Issue.4 , pp. 517-527
    • Pokholok, D.K.1    Harbison, C.T.2    Levine, S.3
  • 38
    • 0038459131 scopus 로고    scopus 로고
    • Comparative analysis of SET domain proteins in maize and arabidopsis reveals multiple duplications preceding the divergence of monocots and dicots
    • Springer, N.M., Napoli, C.A., Selinger, D.A., Pandey, R., Cone, K.C., Chandler, V.L., Kaeppler, H.F. Kaeppler, S.M. (2003) Comparative analysis of SET domain proteins in maize and arabidopsis reveals multiple duplications preceding the divergence of monocots and dicots. Plant Physiol. 132 (2 907 925.
    • (2003) Plant Physiol. , vol.132 , Issue.2 , pp. 907-925
    • Springer, N.M.1    Napoli, C.A.2    Selinger, D.A.3    Pandey, R.4    Cone, K.C.5    Chandler, V.L.6    Kaeppler, H.F.7    Kaeppler, S.M.8
  • 40
    • 0032707566 scopus 로고    scopus 로고
    • Maintenance of genomic imprinting at the arabidopsis medea locus requires zygotic DDM1 activity
    • Vielle-Calzada, J.P., Thomas, J., Spillane, C., Coluccio, A., Hoeppner, M.A. Grossniklaus, U. (1999) Maintenance of genomic imprinting at the arabidopsis medea locus requires zygotic DDM1 activity. Genes Dev. 13 (22 2971 2982.
    • (1999) Genes Dev. , vol.13 , Issue.22 , pp. 2971-2982
    • Vielle-Calzada, J.P.1    Thomas, J.2    Spillane, C.3    Coluccio, A.4    Hoeppner, M.A.5    Grossniklaus, U.6
  • 41
    • 0348044518 scopus 로고    scopus 로고
    • Imprinting of the MEA polycomb gene is controlled by antagonism between MET1 methyltransferase and DME glycosylase
    • Xiao, W., Gehring, M., Choi, Y., Margossian, L., Pu, H., Harada, J.J., Goldberg, R.B., Pennell, R.I. Fischer, R.L. (2003) Imprinting of the MEA polycomb gene is controlled by antagonism between MET1 methyltransferase and DME glycosylase. Dev. Cell, 5 (6 891 901.
    • (2003) Dev. Cell , vol.5 , Issue.6 , pp. 891-901
    • Xiao, W.1    Gehring, M.2    Choi, Y.3    Margossian, L.4    Pu, H.5    Harada, J.J.6    Goldberg, R.B.7    Pennell, R.I.8    Fischer, R.L.9
  • 42
    • 0345257072 scopus 로고    scopus 로고
    • The histone code regulating expression of the imprinted mouse Igf2r gene
    • Yang, Y., Li, T., Vu, T.H., Ulaner, G.A., Hu, J.F. Hoffman, A.R. (2003) The histone code regulating expression of the imprinted mouse Igf2r gene. Endocrinology, 144 (12 5658 5670.
    • (2003) Endocrinology , vol.144 , Issue.12 , pp. 5658-5670
    • Yang, Y.1    Li, T.2    Vu, T.H.3    Ulaner, G.A.4    Hu, J.F.5    Hoffman, A.R.6


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