메뉴 건너뛰기




Volumn 15, Issue 2, 2003, Pages 425-438

Duplicated fie genes in maize: Expression pattern and imprinting suggest distinct functions

Author keywords

[No Author keywords available]

Indexed keywords

FERTILIZERS; PLANTS (BOTANY); PROTEINS;

EID: 0037326955     PISSN: 10404651     EISSN: None     Source Type: Journal    
DOI: 10.1105/tpc.006759     Document Type: Article
Times cited : (159)

References (59)
  • 1
    • 0033824259 scopus 로고    scopus 로고
    • Genomic imprinting in plants: Observation and evolutionary implications
    • Alleman, M., and Doctor, J. (2000). Genomic imprinting in plants: Observation and evolutionary implications. Plant Mol. Biol. 43, 147-161.
    • (2000) Plant Mol. Biol. , vol.43 , pp. 147-161
    • Alleman, M.1    Doctor, J.2
  • 3
    • 0027471974 scopus 로고
    • Complementary floral homeotic phenotypes result from opposite orientations of a transposon at the plena locus of Anti-rrhinum
    • Bradley, D., Carpenter, R., Somer, H., Hartley, N., and Coen, E. (1993). Complementary floral homeotic phenotypes result from opposite orientations of a transposon at the plena locus of Anti-rrhinum. Cell 72, 85-95.
    • (1993) Cell , vol.72 , pp. 85-95
    • Bradley, D.1    Carpenter, R.2    Somer, H.3    Hartley, N.4    Coen, E.5
  • 4
    • 0034130561 scopus 로고    scopus 로고
    • Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays
    • Brenner, S., et al. (2000a). Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays. Nat. Biotechnol. 18, 630-634.
    • (2000) Nat. Biotechnol. , vol.18 , pp. 630-634
    • Brenner, S.1
  • 5
    • 12944293179 scopus 로고    scopus 로고
    • In vitro cloning of complex mixtures of DNA on microbeads: Physical separation of differentially expressed cDNAs
    • Brenner, S., et al. (2000b). In vitro cloning of complex mixtures of DNA on microbeads: Physical separation of differentially expressed cDNAs. Proc. Natl. Acad. Sci. USA 97, 1665-1670.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 1665-1670
    • Brenner, S.1
  • 6
    • 0344240119 scopus 로고    scopus 로고
    • Glutamine synthetase in the phloem plays a major role in controlling proline production
    • Brugière, N., Dubois, F., Limami, A.M., Lelandais, M., Roux, Y., Sangwan, R.S., and Hirel, B. (1999). Glutamine synthetase in the phloem plays a major role in controlling proline production. Plant Cell 10, 1995-2012.
    • (1999) Plant Cell , vol.10 , pp. 1995-2012
    • Brugière, N.1    Dubois, F.2    Limami, A.M.3    Lelandais, M.4    Roux, Y.5    Sangwan, R.S.6    Hirel, B.7
  • 7
    • 0035782666 scopus 로고    scopus 로고
    • Maternal control of seed development
    • Chaudhury, A.M., and Berger, F. (2001). Maternal control of seed development. Cell Dev. Biol. 112, 381-386.
    • (2001) Cell Dev. Biol. , vol.112 , pp. 381-386
    • Chaudhury, A.M.1    Berger, F.2
  • 11
    • 0030855478 scopus 로고    scopus 로고
    • The product of the murine homolog of the Drosophila extra sex combs gene displays transcriptional repressor activity
    • Denisenko, O.N., and Bomsztyk, K. (1997). The product of the murine homolog of the Drosophila extra sex combs gene displays transcriptional repressor activity. Mol. Cell. Biol. 17, 4707-4717.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 4707-4717
    • Denisenko, O.N.1    Bomsztyk, K.2
  • 12
    • 0032125381 scopus 로고    scopus 로고
    • Transcriptional regulators and the evolution of plant form
    • Doebley, J., and Lukens, L. (1998). Transcriptional regulators and the evolution of plant form. Plant Cell 10, 1075-1082.
    • (1998) Plant Cell , vol.10 , pp. 1075-1082
    • Doebley, J.1    Lukens, L.2
  • 13
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 14
    • 0035902527 scopus 로고    scopus 로고
    • The highly recombinogenic bz locus lies in an unusually gene-rich region of the maize genome
    • Fu, H., Park, W., Yan, X., Zheng, Z., Shen, B., and Dooner, H.K. (2001). The highly recombinogenic bz locus lies in an unusually gene-rich region of the maize genome. Proc. Natl. Acad. Sci. USA 15, 8903-8908.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.15 , pp. 8903-8908
    • Fu, H.1    Park, W.2    Yan, X.3    Zheng, Z.4    Shen, B.5    Dooner, H.K.6
  • 15
    • 0023216891 scopus 로고
    • CpG islands in vertebrate genomes
    • Gardiner-Garden, M., and Frommer, M. (1987). CpG islands in vertebrate genomes. J. Mol. Biol. 196, 261-282.
    • (1987) J. Mol. Biol. , vol.196 , pp. 261-282
    • Gardiner-Garden, M.1    Frommer, M.2
  • 16
    • 0030959648 scopus 로고    scopus 로고
    • DNA sequence evidence for the segmental allotetraploid origin of maize
    • Gaut, B.S., and Doebley, J.F. (1997). DNA sequence evidence for the segmental allotetraploid origin of maize. Proc. Natl. Acad. Sci. USA 94, 6809-6814.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 6809-6814
    • Gaut, B.S.1    Doebley, J.F.2
  • 18
    • 0035142882 scopus 로고    scopus 로고
    • Genomic imprinting and seed development: Endosperm formation with and without sex
    • Grossniklaus, U., Spillane, C., Page, D.R., and Kohler, C. (2001). Genomic imprinting and seed development: Endosperm formation with and without sex. Curr. Opin. Plant Biol. 4, 21-27.
    • (2001) Curr. Opin. Plant Biol. , vol.4 , pp. 21-27
    • Grossniklaus, U.1    Spillane, C.2    Page, D.R.3    Kohler, C.4
  • 19
    • 0032540508 scopus 로고    scopus 로고
    • Maternal control of embryogenesis by MEDEA, a Polycomb group gene in Arabidopsis
    • Grossniklaus, U., Vielle-Calzada, J.P., Hoeppner, M.A., and Gagliano, W.B. (1998). Maternal control of embryogenesis by MEDEA, a Polycomb group gene in Arabidopsis. Science 280, 446-450.
    • (1998) Science , vol.280 , pp. 446-450
    • Grossniklaus, U.1    Vielle-Calzada, J.P.2    Hoeppner, M.A.3    Gagliano, W.B.4
  • 20
    • 0001076782 scopus 로고
    • Parent specific gene expression and the triploid endosperm
    • Haig, D., and Westoby, M. (1989). Parent specific gene expression and the triploid endosperm. Am. Nat. 123, 147-155.
    • (1989) Am. Nat. , vol.123 , pp. 147-155
    • Haig, D.1    Westoby, M.2
  • 21
    • 0002473051 scopus 로고
    • Atlas of duplicated sequences
    • Helentjaris, T. (1995). Atlas of duplicated sequences. Maize Newsl. 69, 67-81.
    • (1995) Maize Newsl. , vol.69 , pp. 67-81
    • Helentjaris, T.1
  • 22
    • 0001282586 scopus 로고
    • In situ hybridization in plants
    • D.J. Bowles, S.J. Gurr, and M. McPherson, eds (Oxford, UK: Oxford University Press)
    • Jackson, D.P. (1991). In situ hybridization in plants. In Molecular Plant Pathology: A Practical Approach, D.J. Bowles, S.J. Gurr, and M. McPherson, eds (Oxford, UK: Oxford University Press), pp. 63-74.
    • (1991) Molecular Plant Pathology: A Practical Approach , pp. 63-74
    • Jackson, D.P.1
  • 23
    • 0345192348 scopus 로고    scopus 로고
    • Identification of cis-acting elements important for expression of the starch-branching enzyme I gene in maize endosperm
    • Kim, K.N., and Guiltinan, M.J. (1999). Identification of cis-acting elements important for expression of the starch-branching enzyme I gene in maize endosperm. Plant Physiol. 121, 225-236.
    • (1999) Plant Physiol. , vol.121 , pp. 225-236
    • Kim, K.N.1    Guiltinan, M.J.2
  • 26
    • 0345103674 scopus 로고    scopus 로고
    • Apomixis takes center stage
    • Koltunow, A. (2001). Apomixis takes center stage. Trends Plant Sci. 6, 543.
    • (2001) Trends Plant Sci. , vol.6 , pp. 543
    • Koltunow, A.1
  • 27
    • 0031878315 scopus 로고    scopus 로고
    • The Polycomb group in Caenorhabditis elegans and maternal control of germline development
    • Korf, I., Fan, Y., and Strome, S. (1998). The Polycomb group in Caenorhabditis elegans and maternal control of germline development. Development 125, 2469-2478.
    • (1998) Development , vol.125 , pp. 2469-2478
    • Korf, I.1    Fan, Y.2    Strome, S.3
  • 28
    • 0034641701 scopus 로고    scopus 로고
    • Expression and parent-of-origin effects for FIS2, MEA and FIE in the endosperm and embryo of developing Arabidopsis seeds
    • Luo, M., Bilodeau, P., Dennis, E.S., Peacock, W.J., and Chaudhury, A. (2000). Expression and parent-of-origin effects for FIS2, MEA and FIE in the endosperm and embryo of developing Arabidopsis seeds. Proc. Natl. Acad. Sci. USA 97, 10637-10642.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 10637-10642
    • Luo, M.1    Bilodeau, P.2    Dennis, E.S.3    Peacock, W.J.4    Chaudhury, A.5
  • 30
    • 0030799127 scopus 로고    scopus 로고
    • Revolutionary conservation and predicted structure of the Drosophila extra sex combs repressor protein
    • Ng, J., Li, R., Morgan, K., and Simon, J. (1997). Revolutionary conservation and predicted structure of the Drosophila extra sex combs repressor protein. Mol. Cell. Biol. 17, 6663-6672.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 6663-6672
    • Ng, J.1    Li, R.2    Morgan, K.3    Simon, J.4
  • 33
    • 0033665147 scopus 로고    scopus 로고
    • Sequence and comparative analysis of the mouse 1-megabase region orthologous to the human 11p15 imprinted domain
    • Onyango, P., Miller, W., Lehoczky, J., Leung, C.T., Birren, B., Wheelan, S., Dewar, K., and Feinberg, A.P. (2000). Sequence and comparative analysis of the mouse 1-megabase region orthologous to the human 11p15 imprinted domain. Genome Res. 10, 1697-1710.
    • (2000) Genome Res. , vol.10 , pp. 1697-1710
    • Onyango, P.1    Miller, W.2    Lehoczky, J.3    Leung, C.T.4    Birren, B.5    Wheelan, S.6    Dewar, K.7    Feinberg, A.P.8
  • 34
    • 0032076718 scopus 로고    scopus 로고
    • Polycombing the genome: PcG, trxG, and chromatin silencing
    • Pirrotta, V. (1998). Polycombing the genome: PcG, trxG, and chromatin silencing. Cell 93, 333-336.
    • (1998) Cell , vol.93 , pp. 333-336
    • Pirrotta, V.1
  • 35
    • 0035183199 scopus 로고    scopus 로고
    • Determinants of CpG islands: Expression in early embryo and isochore structure
    • Ponger, L., Duret, L., and Mouchiroud, D. (2001). Determinants of CpG islands: Expression in early embryo and isochore structure. Genome Res. 11, 1854-1860.
    • (2001) Genome Res. , vol.11 , pp. 1854-1860
    • Ponger, L.1    Duret, L.2    Mouchiroud, D.3
  • 36
    • 0035234557 scopus 로고    scopus 로고
    • Genomic imprinting: Parental influence on the genome
    • Reik, W., and Walter, J. (2001). Genomic imprinting: Parental influence on the genome. Nat. Rev. Genet. 2, 21-32.
    • (2001) Nat. Rev. Genet. , vol.2 , pp. 21-32
    • Reik, W.1    Walter, J.2
  • 37
    • 0027135650 scopus 로고
    • The ovule and the embryo sac
    • Reiser, L., and Fischer, R. (1993). The ovule and the embryo sac. Plant Cell 5, 1291-1301.
    • (1993) Plant Cell , vol.5 , pp. 1291-1301
    • Reiser, L.1    Fischer, R.2
  • 38
    • 0032538433 scopus 로고    scopus 로고
    • The human WD repeat protein WAIT-1 specifically interacts with the cytoplasmic tails of beta7-integrins
    • Rietzler, M., Bittner, M., Kolanus, W., Schuster, A., and Holzmann, B. (1998). The human WD repeat protein WAIT-1 specifically interacts with the cytoplasmic tails of beta7-integrins. J. Biol. Chem. 273, 27459-27466.
    • (1998) J. Biol. Chem. , vol.273 , pp. 27459-27466
    • Rietzler, M.1    Bittner, M.2    Kolanus, W.3    Schuster, A.4    Holzmann, B.5
  • 40
    • 0030034646 scopus 로고    scopus 로고
    • Crystal structure of a G-protein beta gamma dimer at 2.1A resolution
    • Sondek, J., Bohm, A., Lambright, D.G., Hamm, H.E., and Sigler, P.B. (1996). Crystal structure of a G-protein beta gamma dimer at 2.1A resolution. Nature 379, 369-374.
    • (1996) Nature , vol.379 , pp. 369-374
    • Sondek, J.1    Bohm, A.2    Lambright, D.G.3    Hamm, H.E.4    Sigler, P.B.5
  • 43
    • 0036010498 scopus 로고    scopus 로고
    • Sequence relationships, conserved domains, and expression patterns for maize homologs of the Polycomb group genes E(z), esc, and E(Pc)
    • Springer, N.M., Danilevskaya, O.N., Hermon, P., Helentjaris, T.G., Phillips, R.L., Kaeppler, H.F., and Kaeppler, S.M. (2002). Sequence relationships, conserved domains, and expression patterns for maize homologs of the Polycomb group genes E(z), esc, and E(Pc). Plant Physiol. 128, 1332-1345.
    • (2002) Plant Physiol. , vol.128 , pp. 1332-1345
    • Springer, N.M.1    Danilevskaya, O.N.2    Hermon, P.3    Helentjaris, T.G.4    Phillips, R.L.5    Kaeppler, H.F.6    Kaeppler, S.M.7
  • 45
    • 0037075039 scopus 로고    scopus 로고
    • Secret life of genes
    • Theißen, G. (2002). Secret life of genes. Nature 415, 741.
    • (2002) Nature , vol.415 , pp. 741
    • Theißen, G.1
  • 46
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G., and Gibson, T.J. (1994). CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 47
    • 0032419812 scopus 로고    scopus 로고
    • Deletion of the H19 differentially methylated domain results in loss of imprinted expression of H19 and lgf2
    • Thorvaldsen, J.L., Duran, K.L., and Bartolomei, M.S. (1998). Deletion of the H19 differentially methylated domain results in loss of imprinted expression of H19 and lgf2. Genes Dev. 12, 3693-3702.
    • (1998) Genes Dev. , vol.12 , pp. 3693-3702
    • Thorvaldsen, J.L.1    Duran, K.L.2    Bartolomei, M.S.3
  • 48
    • 0035141264 scopus 로고    scopus 로고
    • The Drosophila Polycomb group proteins ESC and E(Z) are present in a complex containing the histone-binding protein p55 and the histone deacetylase RPD3
    • Tie, F., Furuyama, T., Prasad-Sinha, J., Jane, E., and Harte, P.J. (2001). The Drosophila Polycomb group proteins ESC and E(Z) are present in a complex containing the histone-binding protein p55 and the histone deacetylase RPD3. Development 123, 275-286.
    • (2001) Development , vol.123 , pp. 275-286
    • Tie, F.1    Furuyama, T.2    Prasad-Sinha, J.3    Jane, E.4    Harte, P.J.5
  • 49
    • 0032751323 scopus 로고    scopus 로고
    • Transcriptional repression mediated by the human Polycomb-group protein EED involves histone deacetylation
    • van der Vlag, J., and Otte, A.P. (1999). Transcriptional repression mediated by the human Polycomb-group protein EED involves histone deacetylation. Nat. Genet. 23, 474-478.
    • (1999) Nat. Genet. , vol.23 , pp. 474-478
    • Van Der Vlag, J.1    Otte, A.P.2
  • 50
    • 0024978113 scopus 로고
    • A small-scale procedure for the rapid isolation of plant RNAs
    • Verwoerd, T.C., Dekker, B.N.M., and Hoekema, A. (1989). A small-scale procedure for the rapid isolation of plant RNAs. Nucleic Acids Res. 17, 2362.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 2362
    • Verwoerd, T.C.1    Dekker, B.N.M.2    Hoekema, A.3
  • 51
    • 0034594939 scopus 로고    scopus 로고
    • Delayed activation of the paternal genome during seed development
    • Vielle-Calzada, B.R., and Grossniklaus, U. (2000). Delayed activation of the paternal genome during seed development. Nature 404, 91-94.
    • (2000) Nature , vol.404 , pp. 91-94
    • Vielle-Calzada, B.R.1    Grossniklaus, U.2
  • 52
  • 53
    • 0034522613 scopus 로고    scopus 로고
    • Hypomethylation promotes autonomous endosperm development and rescues postfertilization lethality in fie mutants
    • Vinkenoog, R., Spielman, M., Adams, S., Fischer, R.L., Dickinson, H.G., and Scott, R.J. (2000). Hypomethylation promotes autonomous endosperm development and rescues postfertilization lethality in fie mutants. Plant Cell 12, 2271-2282.
    • (2000) Plant Cell , vol.12 , pp. 2271-2282
    • Vinkenoog, R.1    Spielman, M.2    Adams, S.3    Fischer, R.L.4    Dickinson, H.G.5    Scott, R.J.6
  • 54
    • 0035671776 scopus 로고    scopus 로고
    • Autonomous endosperm development in flowering plants: How to overcome the imprinting problem?
    • Vinkenoog, R.S., and Scott, R. (2001). Autonomous endosperm development in flowering plants: How to overcome the imprinting problem? Sex. Plant Reprod. 14, 184-189.
    • (2001) Sex. Plant Reprod. , vol.14 , pp. 184-189
    • Vinkenoog, R.S.1    Scott, R.2
  • 55
    • 0035140890 scopus 로고    scopus 로고
    • Plant transposable elements: A hard act to follow
    • Wessler, S.R. (2001). Plant transposable elements: A hard act to follow. Plant Physiol. 125, 149-151.
    • (2001) Plant Physiol. , vol.125 , pp. 149-151
    • Wessler, S.R.1
  • 56
    • 0001673027 scopus 로고
    • Jackknife, bootstrap and other resampling methods in regression analysis (with discussion)
    • Wu, C.F.J. (1986). Jackknife, bootstrap and other resampling methods in regression analysis (with discussion). Ann. Stat. 14, 1261-1350.
    • (1986) Ann. Stat. , vol.14 , pp. 1261-1350
    • Wu, C.F.J.1
  • 57
  • 58
    • 0034486154 scopus 로고    scopus 로고
    • Mutations in the FIE and MEA genes that encode interacting Polycomb proteins cause parent-of-origin effects on seed development by distinct mechanisms
    • Yadegari, R., Kinoshita, T., Lotan, O., Cohen, G., Katz, A., Nakashima, K., Harada, J.J., Goldberg, R.B., Fischer, R.L., and Ohad, N. (2000). Mutations in the FIE and MEA genes that encode interacting Polycomb proteins cause parent-of-origin effects on seed development by distinct mechanisms. Plant Cell 12, 2367-2382.
    • (2000) Plant Cell , vol.12 , pp. 2367-2382
    • Yadegari, R.1    Kinoshita, T.2    Lotan, O.3    Cohen, G.4    Katz, A.5    Nakashima, K.6    Harada, J.J.7    Goldberg, R.B.8    Fischer, R.L.9    Ohad, N.10
  • 59
    • 0034485831 scopus 로고    scopus 로고
    • A segmental gene duplication generated differentially expressed myb homologous genes in maize
    • Zhang, P., Chopra, S., and Peterson, T. (2000). A segmental gene duplication generated differentially expressed myb homologous genes in maize. Plant Cell 12, 2311-2322.
    • (2000) Plant Cell , vol.12 , pp. 2311-2322
    • Zhang, P.1    Chopra, S.2    Peterson, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.