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Volumn 116, Issue 2, 2009, Pages 173-181

An overview of proteomic and metabolomic technologies and their application to pregnancy research

Author keywords

Metabolomics; Pregnancy; Proteomics; Research; Technology

Indexed keywords

DISEASE MARKER; ELECTROSPRAY MASS SPECTROMETRY; EXPERIMENTAL DESIGN; GENE INTERACTION; GYNECOLOGY; HIGH RISK PATIENT; HUMAN; INTRAUTERINE GROWTH RETARDATION; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; METABOLOMICS; MOLECULAR THERAPY; OBSTETRICS; PATHOPHYSIOLOGY; PREECLAMPSIA; PREGNANCY; PREMATURE LABOR; PRIORITY JOURNAL; PROTEOMICS; REVIEW; STILLBIRTH;

EID: 57449096548     PISSN: 14700328     EISSN: 14710528     Source Type: Journal    
DOI: 10.1111/j.1471-0528.2008.01997.x     Document Type: Review
Times cited : (57)

References (70)
  • 1
    • 0034757770 scopus 로고    scopus 로고
    • Proteomics: The move to mixtures
    • Peng J, Gygi S. Proteomics: the move to mixtures. J Mass Spectrom 2001 36 : 1083 91.
    • (2001) J Mass Spectrom , vol.36 , pp. 1083-91
    • Peng, J.1    Gygi, S.2
  • 2
    • 34648825872 scopus 로고    scopus 로고
    • Mass spectrometry based proteomics in urine biomarker discovery
    • Theodorescu D, Mischak H. Mass spectrometry based proteomics in urine biomarker discovery. World J Urol 2007 25 : 435 43.
    • (2007) World J Urol , vol.25 , pp. 435-43
    • Theodorescu, D.1    Mischak, H.2
  • 6
    • 42449156226 scopus 로고
    • Use of combined gas-liquid chromatography and mass spectrometry for clinical problems
    • Horning EC. Use of combined gas-liquid chromatography and mass spectrometry for clinical problems. Clin Chem 1968 14 : 777.
    • (1968) Clin Chem , vol.14 , pp. 777
    • Horning, E.C.1
  • 7
    • 0015131404 scopus 로고
    • Quantitative analysis of urine vapor and breath by gas-liquid partition chromatography
    • Pauling L, Robinson AB, Teranish R, Cary P. Quantitative analysis of urine vapor and breath by gas-liquid partition chromatography. Proc Natl Acad Sci U S A 1971 68 : 2374 76.
    • (1971) Proc Natl Acad Sci U S a , vol.68 , pp. 2374-76
    • Pauling, L.1    Robinson, A.B.2    Teranish, R.3    Cary, P.4
  • 9
    • 35649000519 scopus 로고    scopus 로고
    • Practical points in urinary proteomics
    • Thongboonkerd V. Practical points in urinary proteomics. J Proteome Res 2007 6 : 3881 90.
    • (2007) J Proteome Res , vol.6 , pp. 3881-90
    • Thongboonkerd, V.1
  • 10
    • 33747030845 scopus 로고    scopus 로고
    • Protein biomarker discovery and validation: The long and uncertain path to clinical utility
    • Rifai N, Gillette M, Carr S. Protein biomarker discovery and validation: the long and uncertain path to clinical utility. Nat Biotechnol 2006 24 : 971 83.
    • (2006) Nat Biotechnol , vol.24 , pp. 971-83
    • Rifai, N.1    Gillette, M.2    Carr, S.3
  • 12
    • 0001644020 scopus 로고    scopus 로고
    • The human plasma proteome: History, character and diagnostic prospects
    • Anderson NL, Anderson NG. The human plasma proteome: history, character and diagnostic prospects. Mol Cell Proteomics 2002 1 : 845 67.
    • (2002) Mol Cell Proteomics , vol.1 , pp. 845-67
    • Anderson, N.L.1    Anderson, N.G.2
  • 13
    • 34548359247 scopus 로고    scopus 로고
    • Urine proteomics: The present and future of measuring urinary protein components in disease
    • Barratt J, Topham P. Urine proteomics: the present and future of measuring urinary protein components in disease. CMAJ 2007 177 : 361 8.
    • (2007) CMAJ , vol.177 , pp. 361-8
    • Barratt, J.1    Topham, P.2
  • 14
    • 24744432068 scopus 로고    scopus 로고
    • The potential of proteomics and peptidomics for allergy and asthma research
    • Crameri R. The potential of proteomics and peptidomics for allergy and asthma research. Allergy 2005 60 : 1227 37.
    • (2005) Allergy , vol.60 , pp. 1227-37
    • Crameri, R.1
  • 17
    • 43049132944 scopus 로고    scopus 로고
    • Clinical proteomics and breast cancer: Strategies for diagnostic and therapeutic biomarker discovery
    • Bertucci F, Goncalves A. Clinical proteomics and breast cancer: strategies for diagnostic and therapeutic biomarker discovery. Future Oncol 2008 4 : 271 87.
    • (2008) Future Oncol , vol.4 , pp. 271-87
    • Bertucci, F.1    Goncalves, A.2
  • 18
    • 16344384394 scopus 로고    scopus 로고
    • Renal and urinary proteomics: Current applications and challenges
    • Thongboonkerd V, Malasit P. Renal and urinary proteomics: current applications and challenges. Proteomics 2005 5 : 10233 42.
    • (2005) Proteomics , vol.5 , pp. 10233-42
    • Thongboonkerd, V.1    Malasit, P.2
  • 19
    • 33751356224 scopus 로고    scopus 로고
    • Systems biology, metabolic modelling and metabolomics in drug discovery and development
    • Kell DB. Systems biology, metabolic modelling and metabolomics in drug discovery and development. Drug Discov Today 2006 11 : 1085 92.
    • (2006) Drug Discov Today , vol.11 , pp. 1085-92
    • Kell, D.B.1
  • 20
    • 0036913503 scopus 로고    scopus 로고
    • Rapid and noninvasive diagnosis of the presence and severity of coronary heart disease using H-1-NMR-based metabonomics
    • Brindle JT, Antti H, Holmes E, Tranter G, Nicholson JK, Bethell HWL, et al. Rapid and noninvasive diagnosis of the presence and severity of coronary heart disease using H-1-NMR-based metabonomics. Nat Med 2002 8 : 1439 44.
    • (2002) Nat Med , vol.8 , pp. 1439-44
    • Brindle, J.T.1    Antti, H.2    Holmes, E.3    Tranter, G.4    Nicholson, J.K.5    Bethell, H.W.L.6
  • 22
    • 0003820166 scopus 로고
    • Dublin: N.M. Hospital
    • Annual report. Dublin : N.M. Hospital, 1991.
    • (1991) Annual Report.
  • 23
    • 0002949897 scopus 로고
    • Evaluation of biophysical fetal assessment in high-risk pregnancy to assess ultrasound parameters suitable for screening in the low-risk population
    • Sim D, Beattie RB, Dornan JC. Evaluation of biophysical fetal assessment in high-risk pregnancy to assess ultrasound parameters suitable for screening in the low-risk population. Ultrasound Obstet Gynecol 1993 3 : 11 17.
    • (1993) Ultrasound Obstet Gynecol , vol.3 , pp. 11-17
    • Sim, D.1    Beattie, R.B.2    Dornan, J.C.3
  • 25
    • 33846055395 scopus 로고    scopus 로고
    • Metabolomics of a superorganism
    • Goodacre R. Metabolomics of a superorganism. J Nutr 2007 137 : 259S 66S.
    • (2007) J Nutr , vol.137
    • Goodacre, R.1
  • 26
    • 1442325443 scopus 로고    scopus 로고
    • Evidence for the existence of hypothetical proteins in human bronchial epithelial, fibroblast, amnion, lymphocyte, mesothelial and kidney cell lines
    • Oh JE, Krapfenbauer K, Fountoulakis M, Frischer T, Lubec G. Evidence for the existence of hypothetical proteins in human bronchial epithelial, fibroblast, amnion, lymphocyte, mesothelial and kidney cell lines. Amino Acids 2004 26 : 9 18.
    • (2004) Amino Acids , vol.26 , pp. 9-18
    • Oh, J.E.1    Krapfenbauer, K.2    Fountoulakis, M.3    Frischer, T.4    Lubec, G.5
  • 28
    • 33746211196 scopus 로고    scopus 로고
    • OMICS-driven biomarker discovery in nutrition and health
    • Kussmann M, Raymond F, Affolter M. OMICS-driven biomarker discovery in nutrition and health. J Biotechnol 2006 124 : 758 87.
    • (2006) J Biotechnol , vol.124 , pp. 758-87
    • Kussmann, M.1    Raymond, F.2    Affolter, M.3
  • 31
    • 0345743608 scopus 로고    scopus 로고
    • Here is the evidence, now what is the hypothesis? the complementary roles of inductive and hypothesis-driven science in the post-genomic era
    • Kell DB, Oliver SG. Here is the evidence, now what is the hypothesis? The complementary roles of inductive and hypothesis-driven science in the post-genomic era. Bioessays 2004 26 : 99 105.
    • (2004) Bioessays , vol.26 , pp. 99-105
    • Kell, D.B.1    Oliver, S.G.2
  • 32
    • 41849111818 scopus 로고    scopus 로고
    • A GC-TOF-MS study of the stability of serum and urine metabolomes during the UK Biobank sample collection and preparation protocols
    • Dunn WB, Broadhurst D, Ellis DI, Brown M, Halsall A, O'Hagan S, et al. A GC-TOF-MS study of the stability of serum and urine metabolomes during the UK Biobank sample collection and preparation protocols. Int J Epidemiol 2008 37 (Suppl 1 i23 30.
    • (2008) Int J Epidemiol , vol.37 , Issue.SUPPL. 1
    • Dunn, W.B.1    Broadhurst, D.2    Ellis, D.I.3    Brown, M.4    Halsall, A.5    O'Hagan, S.6
  • 33
    • 0024438708 scopus 로고
    • Electrospray ionisation for mass spectrometry of large biomolecules
    • Fenn J, Mann M, Meng C, Wong S, Whitehouse C. Electrospray ionisation for mass spectrometry of large biomolecules. Science 1988 246 : 64 71.
    • (1988) Science , vol.246 , pp. 64-71
    • Fenn, J.1    Mann, M.2    Meng, C.3    Wong, S.4    Whitehouse, C.5
  • 34
    • 0024289037 scopus 로고
    • Laser desorption ionization of proteins with molecular masses exceeding 10,000 daltons
    • Karas M, Hillenkamp F. Laser desorption ionization of proteins with molecular masses exceeding 10,000 daltons. Anal Chem 1988 60 : 2299 301.
    • (1988) Anal Chem , vol.60 , pp. 2299-301
    • Karas, M.1    Hillenkamp, F.2
  • 35
    • 33746795859 scopus 로고    scopus 로고
    • Technology insight: Renal proteomics - At the crossroads between promise and problems
    • O'Riordan E, Gross SS, Goligorsky MS. Technology insight: renal proteomics - at the crossroads between promise and problems. Nat Clin Pract Nephrol 2006 2 : 445 58.
    • (2006) Nat Clin Pract Nephrol , vol.2 , pp. 445-58
    • O'Riordan, E.1    Gross, S.S.2    Goligorsky, M.S.3
  • 36
    • 0034923505 scopus 로고    scopus 로고
    • Analysis of protiens and proteomics by mass spectrometry
    • Mann M, Hendrickson RC, Pandey A. Analysis of protiens and proteomics by mass spectrometry. Annu Rev Biochem 2001 70 : 437 73.
    • (2001) Annu Rev Biochem , vol.70 , pp. 437-73
    • Mann, M.1    Hendrickson, R.C.2    Pandey, A.3
  • 38
    • 33645813378 scopus 로고    scopus 로고
    • Mass spectrometry and protein analysis
    • Domon B, Aebersold R. Mass spectrometry and protein analysis. Science 2006 312 : 212 17.
    • (2006) Science , vol.312 , pp. 212-17
    • Domon, B.1    Aebersold, R.2
  • 40
    • 0034622925 scopus 로고    scopus 로고
    • Printing proteins as microarrays for high-throughput function determination
    • MacBeath G, Schreiber SL. Printing proteins as microarrays for high-throughput function determination. Science 2000 289 : 1760 3.
    • (2000) Science , vol.289 , pp. 1760-3
    • MacBeath, G.1    Schreiber, S.L.2
  • 42
    • 1242328741 scopus 로고    scopus 로고
    • Fluorescent two-dimensional difference gel electrophoresis unveils the potential of gel-based proteomics
    • Van den Berg G, Arckens L. Fluorescent two-dimensional difference gel electrophoresis unveils the potential of gel-based proteomics. Curr Opin Biotechnol 2004 15 : 38 43.
    • (2004) Curr Opin Biotechnol , vol.15 , pp. 38-43
    • Van Den Berg, G.1    Arckens, L.2
  • 43
    • 34848881868 scopus 로고    scopus 로고
    • How will haematologists use proteomics?
    • Unwin R, Whetton A. How will haematologists use proteomics? Blood Rev 2007 21 : 315 26.
    • (2007) Blood Rev , vol.21 , pp. 315-26
    • Unwin, R.1    Whetton, A.2
  • 44
    • 43849113605 scopus 로고    scopus 로고
    • Eight-channel iTRAQ enables comparison of the activity of 6 leukaemogenic tyrosine kinases
    • Pierce A, Unwin RD, Evans CA, Griffiths S, Carney L, Zhang L, et al. Eight-channel iTRAQ enables comparison of the activity of 6 leukaemogenic tyrosine kinases. Mol Cell Proteomics 2008 7 : 853 63.
    • (2008) Mol Cell Proteomics , vol.7 , pp. 853-63
    • Pierce, A.1    Unwin, R.D.2    Evans, C.A.3    Griffiths, S.4    Carney, L.5    Zhang, L.6
  • 47
    • 42449122308 scopus 로고    scopus 로고
    • Current trends and future requirements for the mass spectrometric investigation of microbial, mammalian and plant metabolomes
    • Dunn WB. Current trends and future requirements for the mass spectrometric investigation of microbial, mammalian and plant metabolomes. Phys Biol 2008 5 : 11001.
    • (2008) Phys Biol , vol.5 , pp. 11001
    • Dunn, W.B.1
  • 48
    • 33846240326 scopus 로고    scopus 로고
    • Statistical strategies for avoiding false discoveries in metabolomics and related experiments
    • Broadhurst DI, Kell DB. Statistical strategies for avoiding false discoveries in metabolomics and related experiments. Metabolomics 2006 2 : 171 96.
    • (2006) Metabolomics , vol.2 , pp. 171-96
    • Broadhurst, D.I.1    Kell, D.B.2
  • 50
    • 0035799346 scopus 로고    scopus 로고
    • Functional proteomics: Examining the effects of hypoxia on the cytotrophoblast protein repertoire
    • Hoang V, Foulk R, Clauser K, Burlingame A, Gibson B, Fisher S. Functional proteomics: examining the effects of hypoxia on the cytotrophoblast protein repertoire. Biochemistry 2001 40 : 4077 86.
    • (2001) Biochemistry , vol.40 , pp. 4077-86
    • Hoang, V.1    Foulk, R.2    Clauser, K.3    Burlingame, A.4    Gibson, B.5    Fisher, S.6
  • 51
    • 0142182382 scopus 로고    scopus 로고
    • Functional proteomics of neurokinin B in the placenta indicates a novel role in regulating cytotrophoblast antioxidant defences
    • Sawicki G, Dakour J, Morrish DW. Functional proteomics of neurokinin B in the placenta indicates a novel role in regulating cytotrophoblast antioxidant defences. Proteomics 2003 3 : 2044 51.
    • (2003) Proteomics , vol.3 , pp. 2044-51
    • Sawicki, G.1    Dakour, J.2    Morrish, D.W.3
  • 52
    • 38649085319 scopus 로고    scopus 로고
    • Effects of oxygen on cell turnover and expression of regulators of apoptosis in human placental trophoblast
    • Heazell AE, Lacey HA, Jones CJ, Huppertz B, Baker PN, Crocker IP. Effects of oxygen on cell turnover and expression of regulators of apoptosis in human placental trophoblast. Placenta 2008 29 : 175 86.
    • (2008) Placenta , vol.29 , pp. 175-86
    • Heazell, A.E.1    Lacey, H.A.2    Jones, C.J.3    Huppertz, B.4    Baker, P.N.5    Crocker, I.P.6
  • 53
    • 57449095978 scopus 로고    scopus 로고
    • Analysis of the metabolic footprint and tissue metabolome of placental villous explants cultured at different oxygen tensions reveals novel redox biomarkers
    • Heazell A, Brown M, Dunn W, Worton S, Crocker I, Baker P, et al. Analysis of the metabolic footprint and tissue metabolome of placental villous explants cultured at different oxygen tensions reveals novel redox biomarkers. Placenta 2008 15 : 318A.
    • (2008) Placenta , vol.15
    • Heazell, A.1    Brown, M.2    Dunn, W.3    Worton, S.4    Crocker, I.5    Baker, P.6
  • 54
    • 33845973396 scopus 로고    scopus 로고
    • Innate immune response by ficolin binding in apoptotic placenta is associated with the clinical syndrome of preeclampsia
    • Wang C, Wing Yim C, Poon T, Choy K, Chu C, Lui W, et al. Innate immune response by ficolin binding in apoptotic placenta is associated with the clinical syndrome of preeclampsia. Clin Chem 2007 53 : 42 52.
    • (2007) Clin Chem , vol.53 , pp. 42-52
    • Wang, C.1    Wing Yim, C.2    Poon, T.3    Choy, K.4    Chu, C.5    Lui, W.6
  • 55
    • 34347357589 scopus 로고    scopus 로고
    • Proteomic analysis of proteins differentially expressed in preeclamptic trophoblasts
    • Sun LZ, Yang NN, De W, Xiao YS. Proteomic analysis of proteins differentially expressed in preeclamptic trophoblasts. Gynecol Obstet Invest 2007 64 : 17 23.
    • (2007) Gynecol Obstet Invest , vol.64 , pp. 17-23
    • Sun, L.Z.1    Yang, N.N.2    De, W.3    Xiao, Y.S.4
  • 58
    • 34248196045 scopus 로고    scopus 로고
    • Identification of novel protein biomarkers of preterm birth in human cervical-vaginal fluid
    • Perieira L, Reddy AP, Jacob T, Thomas A, Schneider KA, Dasari S, et al. Identification of novel protein biomarkers of preterm birth in human cervical-vaginal fluid. J Proteome Res 2007 6 : 1269 76.
    • (2007) J Proteome Res , vol.6 , pp. 1269-76
    • Perieira, L.1    Reddy, A.P.2    Jacob, T.3    Thomas, A.4    Schneider, K.A.5    Dasari, S.6
  • 60
    • 38949161926 scopus 로고    scopus 로고
    • Use of a combination of approaches to identify and validate relevant tumor-associated antigens and their corresponding autoantibodies in ovarian cancer patients
    • Gagnon A, Kim JH, Schorge JO, Ye B, Liu B, Hasselblatt K, et al. Use of a combination of approaches to identify and validate relevant tumor-associated antigens and their corresponding autoantibodies in ovarian cancer patients. Clin Cancer Res 2008 14 : 764 71.
    • (2008) Clin Cancer Res , vol.14 , pp. 764-71
    • Gagnon, A.1    Kim, J.H.2    Schorge, J.O.3    Ye, B.4    Liu, B.5    Hasselblatt, K.6
  • 62
    • 33646086927 scopus 로고    scopus 로고
    • Metabolomics in premature labor: A novel approach to identify patients at risk for preterm delivery
    • Romero R, Gomez R, Nien JK, Yoon BH, Luo R, Beecher C, et al. Metabolomics in premature labor: a novel approach to identify patients at risk for preterm delivery. Am J Obstet Gynecol 2004 191 : S2.
    • (2004) Am J Obstet Gynecol , vol.191
    • Romero, R.1    Gomez, R.2    Nien, J.K.3    Yoon, B.H.4    Luo, R.5    Beecher, C.6
  • 63
    • 20544448502 scopus 로고    scopus 로고
    • Disentangling fetal and maternal susceptibility for pre-eclampsia: A British multicenter candidate-gene study
    • Morgan L. Disentangling fetal and maternal susceptibility for pre-eclampsia: a British multicenter candidate-gene study. Am J Hum Genet 2005 77 : 127 31.
    • (2005) Am J Hum Genet , vol.77 , pp. 127-31
    • Morgan, L.1
  • 65
    • 34548083099 scopus 로고    scopus 로고
    • Plasma from women with Preeclampsia has a low lipid and ketone body content - A nuclear magnetic resonance study
    • Turner E, Brewster JA, Simpson NAB, Walker JJ, Fisher J. Plasma from women with Preeclampsia has a low lipid and ketone body content - a nuclear magnetic resonance study. Hypertens Pregnancy 2007 26 : 329 42.
    • (2007) Hypertens Pregnancy , vol.26 , pp. 329-42
    • Turner, E.1    Brewster, J.A.2    Simpson, N.A.B.3    Walker, J.J.4    Fisher, J.5
  • 66
    • 35648974233 scopus 로고    scopus 로고
    • Noninvasive metabolomic profiling of embryo culture media using Raman and near-infrared spectroscopy correlates with reproductive potential of embryos in women undergoing in vitro fertilization
    • Seli E, Sakkas D, Scott R, Kwok SC, Rosendahl SM, Burns DH. Noninvasive metabolomic profiling of embryo culture media using Raman and near-infrared spectroscopy correlates with reproductive potential of embryos in women undergoing in vitro fertilization. Fertil Steril 2007 88 : 1350 7.
    • (2007) Fertil Steril , vol.88 , pp. 1350-7
    • Seli, E.1    Sakkas, D.2    Scott, R.3    Kwok, S.C.4    Rosendahl, S.M.5    Burns, D.H.6
  • 67
    • 34547094578 scopus 로고    scopus 로고
    • Metabolomics: Approaches to assessing oocyte and embryo quality
    • Singh R, Sinclair KD. Metabolomics: approaches to assessing oocyte and embryo quality. Theriogenology 2007 68 (Suppl 1 S56 62.
    • (2007) Theriogenology , vol.68 , Issue.SUPPL. 1
    • Singh, R.1    Sinclair, K.D.2
  • 68
    • 3042858551 scopus 로고    scopus 로고
    • Applications of proteomic methodologies to human pregnancy research: A growing gestation approaching delivery?
    • Shankar R, Cullinane F, Brennecke SP, Moses EK. Applications of proteomic methodologies to human pregnancy research: a growing gestation approaching delivery? Proteomics 2004 4 : 1909 17.
    • (2004) Proteomics , vol.4 , pp. 1909-17
    • Shankar, R.1    Cullinane, F.2    Brennecke, S.P.3    Moses, E.K.4
  • 69
    • 2542596176 scopus 로고    scopus 로고
    • HUPO initiatives relevant to clinical proteomics
    • Hanash S. HUPO initiatives relevant to clinical proteomics. Mol Cell Proteomics 2004 3 : 298 301.
    • (2004) Mol Cell Proteomics , vol.3 , pp. 298-301
    • Hanash, S.1
  • 70
    • 18844406001 scopus 로고    scopus 로고
    • Measuring the metabolome: Current analytical technologies
    • Dunn WB, Bailey NJC, Johnson HE. Measuring the metabolome: current analytical technologies. Analyst 2005 130 : 606 25.
    • (2005) Analyst , vol.130 , pp. 606-25
    • Dunn, W.B.1    Bailey, N.J.C.2    Johnson, H.E.3


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