-
1
-
-
0037188910
-
Bidirectional gene organization: a common architectural feature of the human genome
-
Adachi N., and Lieber M.R. Bidirectional gene organization: a common architectural feature of the human genome. Cell 109 (2002) 807-809
-
(2002)
Cell
, vol.109
, pp. 807-809
-
-
Adachi, N.1
Lieber, M.R.2
-
2
-
-
0028385745
-
The 5′-region of Arabidopsis thaliana cor15a has cis-acting elements that confer cold-, drought- and ABA-regulated gene expression
-
Baker S.S., Wilhelm K.S., and Thomashow M.F. The 5′-region of Arabidopsis thaliana cor15a has cis-acting elements that confer cold-, drought- and ABA-regulated gene expression. Plant Mol. Biol. 24 (1994) 701-713
-
(1994)
Plant Mol. Biol.
, vol.24
, pp. 701-713
-
-
Baker, S.S.1
Wilhelm, K.S.2
Thomashow, M.F.3
-
4
-
-
0038459120
-
A role for the GCC-box in jasmonate-mediated activation of the PDF1.2 gene of Arabidopsis
-
Brown R.L., Kazan K., McGrath K.C., Maclean D.J., and Manners J.M. A role for the GCC-box in jasmonate-mediated activation of the PDF1.2 gene of Arabidopsis. Plant Physiol. 132 (2003) 1020-1032
-
(2003)
Plant Physiol.
, vol.132
, pp. 1020-1032
-
-
Brown, R.L.1
Kazan, K.2
McGrath, K.C.3
Maclean, D.J.4
Manners, J.M.5
-
5
-
-
0033119581
-
The TCP domain: a motif found in proteins regulating plant growth and development
-
Cubas P., Lauter N., Doebley J., and Coen E. The TCP domain: a motif found in proteins regulating plant growth and development. Plant J. 18 (1999) 215-222
-
(1999)
Plant J.
, vol.18
, pp. 215-222
-
-
Cubas, P.1
Lauter, N.2
Doebley, J.3
Coen, E.4
-
6
-
-
0033824414
-
Plants as bioreactors for protein production: avoiding the problem of transgene silencing
-
De Wilde C.H., Van Houdt S., De Buck G., Angenon G., De Jaeger G., and Depicker A. Plants as bioreactors for protein production: avoiding the problem of transgene silencing. Plant Mol. Biol. 43 (2000) 347-359
-
(2000)
Plant Mol. Biol.
, vol.43
, pp. 347-359
-
-
De Wilde, C.H.1
Van Houdt, S.2
De Buck, G.3
Angenon, G.4
De Jaeger, G.5
Depicker, A.6
-
7
-
-
0043192812
-
The crystal structure of polygalacturonase-inhibiting protein (PGIP), a leucine-rich repeat protein involved in plant defense
-
Di Matteo D., et al. The crystal structure of polygalacturonase-inhibiting protein (PGIP), a leucine-rich repeat protein involved in plant defense. Proc. Natl. Acad. Sci. U. S. A. 100 (2003) 10124-10128
-
(2003)
Proc. Natl. Acad. Sci. U. S. A.
, vol.100
, pp. 10124-10128
-
-
Di Matteo, D.1
-
8
-
-
56949097031
-
Bidirectional gene organization: a common architectural feature of promoter elements in stress responses of the Arabidopsis Adh Gene
-
Dolferus R., Jacobs M., Peacock W.J., and Lieber M.R. Bidirectional gene organization: a common architectural feature of promoter elements in stress responses of the Arabidopsis Adh Gene. Plant Physiol. 105 (2002) 1075-1087
-
(2002)
Plant Physiol.
, vol.105
, pp. 1075-1087
-
-
Dolferus, R.1
Jacobs, M.2
Peacock, W.J.3
Lieber, M.R.4
-
9
-
-
0033994181
-
Transcriptional control elements and complex initiation pattern of the TATA-less bidirectional human thymidylate synthase promoter
-
Dong S., Lester L., and Johnson L.F. Transcriptional control elements and complex initiation pattern of the TATA-less bidirectional human thymidylate synthase promoter. J. Cell Biochem. 77 (2000) 50-64
-
(2000)
J. Cell Biochem.
, vol.77
, pp. 50-64
-
-
Dong, S.1
Lester, L.2
Johnson, L.F.3
-
10
-
-
33646473694
-
Complex loci in human and mouse genomes
-
Engström P.G., et al. Complex loci in human and mouse genomes. PLoS Genet. 2 (2006) e47
-
(2006)
PLoS Genet.
, vol.2
-
-
Engström, P.G.1
-
11
-
-
0034520098
-
Chromatin-associated HMG1, HMGI/Y and SSRP1 proteins of higher plants
-
Grasser K.D., Krohn N.M., Lichota J., and Stemmer C. Chromatin-associated HMG1, HMGI/Y and SSRP1 proteins of higher plants. Physiol. Plant. 110 (2000) 427-435
-
(2000)
Physiol. Plant.
, vol.110
, pp. 427-435
-
-
Grasser, K.D.1
Krohn, N.M.2
Lichota, J.3
Stemmer, C.4
-
12
-
-
27744464483
-
Gene stacking in transgenic plants - the challenge for 21st century plant biotechnology
-
Halpin C. Gene stacking in transgenic plants - the challenge for 21st century plant biotechnology. Plant Biotech. 3 (2005) 141-155
-
(2005)
Plant Biotech.
, vol.3
, pp. 141-155
-
-
Halpin, C.1
-
13
-
-
0032918558
-
Plant cis-acting regulatory DNA elements (PLACE) database: 1999
-
Higo K., Ugawa Y., Iwamoto M., and Korenaga T. Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Res. 27 (1999) 297-300
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 297-300
-
-
Higo, K.1
Ugawa, Y.2
Iwamoto, M.3
Korenaga, T.4
-
14
-
-
0029118767
-
A cDNA encoding a plant homologue to animal HMG box proteins involved in structure-specific recognition of DNA (SSRP family)
-
Hotze M., Lurz G., and Schriider J. A cDNA encoding a plant homologue to animal HMG box proteins involved in structure-specific recognition of DNA (SSRP family). Gene 161 (1995) 295-296
-
(1995)
Gene
, vol.161
, pp. 295-296
-
-
Hotze, M.1
Lurz, G.2
Schriider, J.3
-
15
-
-
0347859216
-
Identification of promoter motifs involved in the network of phytochrome A-regulated gene expression by combined analysis of genomic sequence and microarray data
-
Hudson M.E., and Quail P.H. Identification of promoter motifs involved in the network of phytochrome A-regulated gene expression by combined analysis of genomic sequence and microarray data. Plant Physiol. 133 (2003) 1605-1616
-
(2003)
Plant Physiol.
, vol.133
, pp. 1605-1616
-
-
Hudson, M.E.1
Quail, P.H.2
-
16
-
-
0032007281
-
Three cis-elements required for rice α-amylase Amy3D expression during sugar starvation
-
Hwang Y.S., Karrer E.E., Thomas B.R., Chen L., and Rodriguez R.L. Three cis-elements required for rice α-amylase Amy3D expression during sugar starvation. Plant Mol. Biol. 36 (1998) 331-341
-
(1998)
Plant Mol. Biol.
, vol.36
, pp. 331-341
-
-
Hwang, Y.S.1
Karrer, E.E.2
Thomas, B.R.3
Chen, L.4
Rodriguez, R.L.5
-
17
-
-
2942681717
-
Plants: the latest model system for G-protein research
-
Jones A.M., and Assmann S.M. Plants: the latest model system for G-protein research. EMBO Rep. 5 (2004) 572-578
-
(2004)
EMBO Rep.
, vol.5
, pp. 572-578
-
-
Jones, A.M.1
Assmann, S.M.2
-
18
-
-
0039118382
-
Proliferating cell nuclear antigen: more than a clamp for DNA polymerases
-
Jonsson Z.O., and Hubscher U. Proliferating cell nuclear antigen: more than a clamp for DNA polymerases. BioEssays 19 (1997) 967-975
-
(1997)
BioEssays
, vol.19
, pp. 967-975
-
-
Jonsson, Z.O.1
Hubscher, U.2
-
19
-
-
0041851251
-
Isolation and characterization of a rice WUSCHEL-type homeobox gene that is scpecifically expressed in the central cells of a quiescent centre in the root apical meristem
-
Kamiya N., Nagasaki H., Morikami A., Sato Y., and Matsuoka M. Isolation and characterization of a rice WUSCHEL-type homeobox gene that is scpecifically expressed in the central cells of a quiescent centre in the root apical meristem. Plant J. 35 (2003) 429-441
-
(2003)
Plant J.
, vol.35
, pp. 429-441
-
-
Kamiya, N.1
Nagasaki, H.2
Morikami, A.3
Sato, Y.4
Matsuoka, M.5
-
20
-
-
0033828048
-
The COP9 signalosome: from light signaling to general developmental regulation and back
-
Karniol B., and Chamovitz D.A. The COP9 signalosome: from light signaling to general developmental regulation and back. Curr. Opin. Plant Biol. 3 (2000) 387-393
-
(2000)
Curr. Opin. Plant Biol.
, vol.3
, pp. 387-393
-
-
Karniol, B.1
Chamovitz, D.A.2
-
21
-
-
0037456154
-
Structure and promoter activity of the human glia maturation factor-γ gene: A TATA-less, GC-rich and bidirectional promoter
-
Kawai Y., et al. Structure and promoter activity of the human glia maturation factor-γ gene: A TATA-less, GC-rich and bidirectional promoter. Biochim. Biophys. Acta 1625 (2003) 246-252
-
(2003)
Biochim. Biophys. Acta
, vol.1625
, pp. 246-252
-
-
Kawai, Y.1
-
22
-
-
0028066548
-
A seed-specific Brassica napus oleosin promoter interacts with a G box-specific protein and may be bi-directional
-
Keddie J.S., Tsiantis M., Piffanelli P., Hatzopoulos P., and Murphy D.J. A seed-specific Brassica napus oleosin promoter interacts with a G box-specific protein and may be bi-directional. Plant Mol. Biol. 24 (1994) 327-340
-
(1994)
Plant Mol. Biol.
, vol.24
, pp. 327-340
-
-
Keddie, J.S.1
Tsiantis, M.2
Piffanelli, P.3
Hatzopoulos, P.4
Murphy, D.J.5
-
23
-
-
0031225050
-
PCF1 and PCF2 specifically bind to cis elements in the rice proliferating cell nuclear antigen gene
-
Kosugi S., and Ohashi Y. PCF1 and PCF2 specifically bind to cis elements in the rice proliferating cell nuclear antigen gene. Plant Cell 9 (1997) 1607-1619
-
(1997)
Plant Cell
, vol.9
, pp. 1607-1619
-
-
Kosugi, S.1
Ohashi, Y.2
-
24
-
-
0036106417
-
DNA binding and dimerization specificity and potential targets for the TCP protein family
-
Kosugi S., and Ohashi Y. DNA binding and dimerization specificity and potential targets for the TCP protein family. Plant J. 30 (2002) 337-348
-
(2002)
Plant J.
, vol.30
, pp. 337-348
-
-
Kosugi, S.1
Ohashi, Y.2
-
25
-
-
0029311326
-
Two of three promoter elements identified in a rice gene for proliferating cell nuclear antigen are essential for meristematic tissue-specific expression
-
Kosugi S., Suzuka I., and Ohashi Y. Two of three promoter elements identified in a rice gene for proliferating cell nuclear antigen are essential for meristematic tissue-specific expression. Plant J. 7 (1995) 877-886
-
(1995)
Plant J.
, vol.7
, pp. 877-886
-
-
Kosugi, S.1
Suzuka, I.2
Ohashi, Y.3
-
26
-
-
53749097001
-
Comparative analysis of divergent and convergent gene pairs and their expression patterns in rice, Arabidopsis, and Populus
-
Krom N., and Ramakrishna W. Comparative analysis of divergent and convergent gene pairs and their expression patterns in rice, Arabidopsis, and Populus. Plant Phys. 147 (2008) 1763-1773
-
(2008)
Plant Phys.
, vol.147
, pp. 1763-1773
-
-
Krom, N.1
Ramakrishna, W.2
-
27
-
-
34250324685
-
Transcription factor binding and modified histones in human bidirectional promoters
-
Lin J.M., et al. Transcription factor binding and modified histones in human bidirectional promoters. Genome Res. 17 (2007) 818-827
-
(2007)
Genome Res.
, vol.17
, pp. 818-827
-
-
Lin, J.M.1
-
28
-
-
0032444227
-
Role of WUSCHEL in regulating stem cell fate in the Arabidopsis shoot meristem
-
Mayer K.F.X., Schoof H., Haecker A., Lenhard M., Jurgens G., and Luax T. Role of WUSCHEL in regulating stem cell fate in the Arabidopsis shoot meristem. Cell 95 (1998) 805-815
-
(1998)
Cell
, vol.95
, pp. 805-815
-
-
Mayer, K.F.X.1
Schoof, H.2
Haecker, A.3
Lenhard, M.4
Jurgens, G.5
Luax, T.6
-
29
-
-
0033080470
-
The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression is regulated by low temperature but not by abscisic acid or dehydration
-
Medina J., Bargues M., Terol J., Pérez-Alonso M., and Salinas J. The Arabidopsis CBF gene family is composed of three genes encoding AP2 domain-containing proteins whose expression is regulated by low temperature but not by abscisic acid or dehydration. Plant Physiol. 119 (1999) 463-470
-
(1999)
Plant Physiol.
, vol.119
, pp. 463-470
-
-
Medina, J.1
Bargues, M.2
Terol, J.3
Pérez-Alonso, M.4
Salinas, J.5
-
30
-
-
3042581437
-
Arabidopsis MPSS. An online resource for quantitative expression analysis
-
Meyers B.C., et al. Arabidopsis MPSS. An online resource for quantitative expression analysis. Plant Physiol. 135 (2004) 801-813
-
(2004)
Plant Physiol.
, vol.135
, pp. 801-813
-
-
Meyers, B.C.1
-
31
-
-
0032512715
-
Functional dissection of a sugar-repressed alpha-amylase gene (Ramy1A) promoter in rice embryos
-
Morita A., Umemura T., Kuroyanagi M., Futsuhara Y., Perata P., and Yamaguchi J. Functional dissection of a sugar-repressed alpha-amylase gene (Ramy1A) promoter in rice embryos. FEBS Lett. 423 (1998) 81-85
-
(1998)
FEBS Lett.
, vol.423
, pp. 81-85
-
-
Morita, A.1
Umemura, T.2
Kuroyanagi, M.3
Futsuhara, Y.4
Perata, P.5
Yamaguchi, J.6
-
32
-
-
0027568404
-
Identification of protein-binding DNA sequences in an auxin-regulated gene of soybean
-
Nagao R.-T., Goekjian V.H., Hong J.C., and Key J.L. Identification of protein-binding DNA sequences in an auxin-regulated gene of soybean. Plant Mol. Biol. 21 (1993) 1147-1162
-
(1993)
Plant Mol. Biol.
, vol.21
, pp. 1147-1162
-
-
Nagao, R.-T.1
Goekjian, V.H.2
Hong, J.C.3
Key, J.L.4
-
33
-
-
6044266236
-
Plant heterotrimeric G protein function: insights from Arabidopsis and rice mutants
-
Perfus-Barbeoch L., Jones A.M., and Assmann A.M. Plant heterotrimeric G protein function: insights from Arabidopsis and rice mutants. Curr. Opin. Plant Biol. 7 (2004) 719-731
-
(2004)
Curr. Opin. Plant Biol.
, vol.7
, pp. 719-731
-
-
Perfus-Barbeoch, L.1
Jones, A.M.2
Assmann, A.M.3
-
34
-
-
0030210045
-
Identification of a peptide methionine sulphoxide reductase gene in an oleosin promoter from Brassica napus
-
Sadanandom A., et al. Identification of a peptide methionine sulphoxide reductase gene in an oleosin promoter from Brassica napus. Plant J. 10 (1996) 235-242
-
(1996)
Plant J.
, vol.10
, pp. 235-242
-
-
Sadanandom, A.1
-
35
-
-
0038009131
-
The CaTin1 (Capsicum annuum TMVinduced clone 1) and CaTin1-2 genes are linked head-to-head and share a bidirectional promoter
-
Shin R., Kim M.J., and Paek K.-H. The CaTin1 (Capsicum annuum TMVinduced clone 1) and CaTin1-2 genes are linked head-to-head and share a bidirectional promoter. Plant Cell Physiol. 44 (2003) 549-554
-
(2003)
Plant Cell Physiol.
, vol.44
, pp. 549-554
-
-
Shin, R.1
Kim, M.J.2
Paek, K.-H.3
-
36
-
-
26944452075
-
Identification of cis-elements that regulate gene expression during initiation of axillary bud outgrowth in Arabidopsis
-
Tatematsu K., Ward S., Leyser O., Kamiya Y., and Nambara E. Identification of cis-elements that regulate gene expression during initiation of axillary bud outgrowth in Arabidopsis. Plant Physiol. 138 (2005) 757-766
-
(2005)
Plant Physiol.
, vol.138
, pp. 757-766
-
-
Tatematsu, K.1
Ward, S.2
Leyser, O.3
Kamiya, Y.4
Nambara, E.5
-
37
-
-
43349085046
-
The relationship of potential G-quadruplex sequences in cis-upstream regions of the human genome to SP1-binding elements
-
Todd A.K., and Neidle S. The relationship of potential G-quadruplex sequences in cis-upstream regions of the human genome to SP1-binding elements. Nucleic Acids Res. 36 (2008) 2700-2704
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 2700-2704
-
-
Todd, A.K.1
Neidle, S.2
-
38
-
-
10644261306
-
Asymmetric expression of transcripts derived from the shared promoter between the divergently oriented ACACA and TADA2L genes
-
Travers M.T., Cambot M., Kennedy H.T., Lenoir G.M., Barber M.C., and Joulin V. Asymmetric expression of transcripts derived from the shared promoter between the divergently oriented ACACA and TADA2L genes. Genomics 85 (2005) 71-84
-
(2005)
Genomics
, vol.85
, pp. 71-84
-
-
Travers, M.T.1
Cambot, M.2
Kennedy, H.T.3
Lenoir, G.M.4
Barber, M.C.5
Joulin, V.6
-
39
-
-
0037356816
-
Internal telomeric repeats and ''TCP-domain'' protein binding sites cooperate to regulate gene expression in Arabidopsis thaliana cycling cells
-
Tre ́mousaygue D., Garnier L., Bardet C., Dabos P., Herve ́ C., and Lescure B. Internal telomeric repeats and ''TCP-domain'' protein binding sites cooperate to regulate gene expression in Arabidopsis thaliana cycling cells. Plant J. 33 (2003) 957-966
-
(2003)
Plant J.
, vol.33
, pp. 957-966
-
-
Tre ́mousaygue, D.1
Garnier, L.2
Bardet, C.3
Dabos, P.4
Herve ́, C.5
Lescure, B.6
-
40
-
-
0347135948
-
An abundance of bidirectional promoters in the human genome
-
Trinklein N.D., et al. An abundance of bidirectional promoters in the human genome. Genome Res. 14 (2004) 62-66
-
(2004)
Genome Res.
, vol.14
, pp. 62-66
-
-
Trinklein, N.D.1
-
41
-
-
33750210385
-
Identification of a plastid response element that acts as an enhancer within the Chlamydomonas HSP70A promoter
-
Von Gromoff E.D., Schroda M., Oster U., and Beck C.F. Identification of a plastid response element that acts as an enhancer within the Chlamydomonas HSP70A promoter. Nucleic Acids Res. 34 (2006) 4767-4779
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 4767-4779
-
-
Von Gromoff, E.D.1
Schroda, M.2
Oster, U.3
Beck, C.F.4
-
42
-
-
20144373073
-
Chicken TAP genes differ from their human orthologues in locus organisation, size, sequence features and polymorphism
-
Walker B.A., Hateren A.V., Milne S., Beck S., and Kaufman J. Chicken TAP genes differ from their human orthologues in locus organisation, size, sequence features and polymorphism. Immunogenetics 57 (2005) 232-247
-
(2005)
Immunogenetics
, vol.57
, pp. 232-247
-
-
Walker, B.A.1
Hateren, A.V.2
Milne, S.3
Beck, S.4
Kaufman, J.5
-
43
-
-
0347093311
-
An Arabidopsis RNA lariat debranching enzyme is essential for embryogenesis
-
Wang H., Hill K., and Perry S.E. An Arabidopsis RNA lariat debranching enzyme is essential for embryogenesis. J. Biol. Chem. 279 (2004) 1468-1473
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 1468-1473
-
-
Wang, H.1
Hill, K.2
Perry, S.E.3
-
44
-
-
33745647013
-
Overrepresentation of elements recognized by TCP-domain transcription factors in the upstream regions of nuclear genes encoding components of the mitochondrial oxidative phosphorylation machinery
-
Welchen E., and Gonzalez D.H. Overrepresentation of elements recognized by TCP-domain transcription factors in the upstream regions of nuclear genes encoding components of the mitochondrial oxidative phosphorylation machinery. Plant Physiol. 141 (2006) 540-545
-
(2006)
Plant Physiol.
, vol.141
, pp. 540-545
-
-
Welchen, E.1
Gonzalez, D.H.2
-
45
-
-
33644872913
-
Exploring the ESCRTing machinery in eukaryotes
-
Winter V., and Hauser M.-T. Exploring the ESCRTing machinery in eukaryotes. Trends Plant Sci. 11 (2006) 115-123
-
(2006)
Trends Plant Sci.
, vol.11
, pp. 115-123
-
-
Winter, V.1
Hauser, M.-T.2
-
46
-
-
14844295427
-
AtNAP1 represents an atypical SufB protein in Arabidopsis plastids
-
Xu X.M., Adams S., Chua N.-H., and Moller S.G. AtNAP1 represents an atypical SufB protein in Arabidopsis plastids. J. Biol. Chem. 280 (2005) 6648-6654
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 6648-6654
-
-
Xu, X.M.1
Adams, S.2
Chua, N.-H.3
Moller, S.G.4
-
47
-
-
0037160040
-
A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants
-
Yang T., and Poovaiah B.W. A calmodulin-binding/CGCG box DNA-binding protein family involved in multiple signaling pathways in plants. J. Biol. Chem. 277 (2002) 45049-45058
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 45049-45058
-
-
Yang, T.1
Poovaiah, B.W.2
-
48
-
-
34247561298
-
Comprehensive annotation of bidirectional promoters identifies co-regulation among breast and ovarian cancer genes
-
Yang M.Q., Koehly L.M., and Elnitski L.L. Comprehensive annotation of bidirectional promoters identifies co-regulation among breast and ovarian cancer genes. PLoS Comput. Biol. 3 (2007) e72
-
(2007)
PLoS Comput. Biol.
, vol.3
-
-
Yang, M.Q.1
Koehly, L.M.2
Elnitski, L.L.3
-
49
-
-
32044469882
-
The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family
-
Yanhui C., et al. The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. Plant Mol. Biol. 60 (2006) 107-124
-
(2006)
Plant Mol. Biol.
, vol.60
, pp. 107-124
-
-
Yanhui, C.1
|