Internal telomeric repeats and 'TCP domain' protein-binding sites co-operate to regulate gene expression in Arabidopsis thaliana cycling cells

Plant Journal

Volumn 33, Issue 6, 2003, Pages 957-966

  Trémousaygue, Dominique ^a   Garnier, Lionel ^a   Bardet, Claude ^a   Dabos, Patrick ^a   Hervé, Christine ^a   Lescure, Bernard ^a  

^a CNRS   (France)

Author keywords

At TCP20; AtPur ; Cell division; PCNA; Ribosomal protein gene; Transcription regulation

Indexed keywords

ANTIGENS; CELLS; DNA; PROTEINS;

PROLIFERATING CELLULAR NUCLEAR ANTIGENS (PCNA);

GENETIC ENGINEERING;

ARABIDOPSIS; BASE SEQUENCE; BINDING SITES; CELL CYCLE; CONSERVED SEQUENCE; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; MOLECULAR SEQUENCE DATA; PLANTS, GENETICALLY MODIFIED; PROLIFERATING CELL NUCLEAR ANTIGEN; PROMOTER REGIONS (GENETICS); PROTEIN BINDING; REGULATORY SEQUENCES, NUCLEIC ACID; RESPONSE ELEMENTS; RIBOSOMAL PROTEINS; TELOMERE;

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 0037356816     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.2003.01682.x     Document Type: Article

References (42)

1. Axelos, M., Bardet, C., Liboz, T., Le Van Thai, A., Curie, C. and Lescure, B. (1989) The gene ramify encoding the translation elongation factor eEF1A: molecular cloning, characterization and expression. Mol. Gen. Genet. 219, 106-112.
2. Axelos, M., Curie, C., Mazzolini, L., Bardet, C. and Lescure, B. (1992) A protocol for transient gene expression in Arabidopsis thaliana protoplasts isolated from cell suspension cultures. Plant Physiol. Biochem. 30, 123-128.
3. Barakat, A., Szick-Miranda, K., Chang, I.F., Guyot, R., Blanc, G., Cooke, R., Delseny, M. and Bailey-Serres, J. (2001) The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. Plant Physiol. 127 (2), 398-415.
4. Bergemann, A.D., Ma, Z-W. and Johnson, E.M. (1992) Sequence of the cDNA comprising the human pur gene sequence and sequence-specific single-stranded DNA-binding properties of the encoded protein. Mol. Cell. Biol. 12, 5673-5682.
5. Chen, F. and Ioannou, Y.A. (1999) Ribosomal protein in cell proliferation and apoptosis. Int. Rev. Immunol. 18, 429-448.
6. Cubas, P. (2002) Role of TCP genes in the evolution of morphological characters in angiosperms. In Developmental Genetics and Plant Evolution (Cronk, Q.C.B., Bateman, R.M. and Hawkins, J.A., eds), London: Taylor & Francis, pp. 247-266.
7. Cubas, P., Lauter, N., Doebley, J. and Coen, E. (1999) The TCP domain: a motif found in proteins regulating plant growth and development. Plant J. 18, 215-222.
8. Curie, C., Axelos, M., Bardet, C., Atanassova, R., Chaubet, N. and Lescure, B. (1993) Modular organization and developmental activity of an Arabidopsis thaliana eEF1a gene promoter. Mol. Gen. Genet. 238, 428-436.
9. Curie, C., Liboz, T., Bardet, C., Gander, E., Médale, C., Axelos, M. and Lescure, B. (1991) Cis- and trans-acting elements involved in the activation of the Arabidopsis thaliana A1 gene encoding the translation elongation factor eEF1a. Nucl. Acids Res. 19, 1305-1310.
10. Darbinian, N., Gallia, G. and Khalili, K. (2001) Helix-destabilizing properties of the human single-stranded DNA- and RNA-binding protein Purα. J. Cell. Biochem. 80, 589-595.
11. De Veylder, L., De Almeida Engler, J., Burssens, J., Manevski, A., Lescure, B., Van Montagu, M., Engler, G. and Inze, D. (1999) A new D-type cyclin of Arabidopsis thaliana expressed during lateral root formation. Planta, 208, 453-462.
12. Fitzgerald, M.S., Riha, K., Gao, F., Ren, S., McKnight, T. D. and Shippen, D.E. (1999) Disruption of the telomerase catalytic subunit gene from Arabidopsis inactivates telomerase and leads to a slow loss of telomeric DNA. PNAS, 96 (26), 14813-14818.
13. Gallia, G., Johnson, E. and Khalili, K. (2000) Purα, a multifunctional single-stranded DNA-and RNA-binding protein. Nucl. Acids Res. 28, 3197-3205.
14. Gantt, J. and Key, J. (1985) Co-ordinate expression of ribosomal protein mRNA following auxin treatment of soybean hypocotyls. Biochemistry, 22, 4131-4139.
15. Gao, J., Kim, S., Chung, Y., Lee, J. and An, G. (1994) Developmental and environmental regulation of two ribosomal protein genes in tobacco. Plant Mol. Biol. 25, 761-770.
16. Hwang, M., Chung, I., Kang, B. and Cho, M. (2001) Sequence-specific binding property of Arabidopsis thaliana telomeric DNA binding protein 1 (AtTBP1). FEBS Lett. 503, 35-40.
17. Ito, T., Kim, G.T. and Shinozaki, K. (2000) Disruption of an Arabidopsis S-13 homologous gene by transposon-mediated mutagenesis causes aberrant growth and development. Plant J. 22 (3), 257-264.
18. Kosugi, S. and Ohashi, Y. (1997) PCF1 and PCF2 specifically bind to cis elements in the rice proliferating cell nuclear antigen gene. Plant Cell, 13, 1437-1452.
19. Kosugi, S. and Ohashi, Y. (2002) DNA binding and dimerization specificity and potential targets for the TCP protein family. Plant J. 30 (3), 337-348.
20. Kosugi, S., Suzuka, I. and Ohashi, Y. (1995) Two of three promoter elements identified in a rice gene for proliferating cell nuclear antigen are essential for meristematic tissue-specific expression. Plant J. 7, 877-886.
21. Liboz, T., Bardet, C., Le Van Thai, A., Axelos, M. and Lescure, B. (1990) The four members of the gene family encoding the Arabidopsis thaliana translation elongation factor eEF1a are actively transcribed. Plant Mol. Biol. 14, 107-110.
22. Manevski, A., Bardet, C., Tremousaygue, D. and Lescure, B. (1999) Characterization and properties of heteromeric plant protein complexes that interact with the tef cis-acting elements in both RNA polymerase II-dependent promoters and rDNA spacer sequences. Mol. Gen. Genet. 261, 892-900.
23. Manevski, A., Bertoni, G., Bardet, C., Tremousaygue, D. and Lescure, B. (2000) In synergy with various cis-acting elements, plant interstitial telomere motifs regulate gene expression in Arabidopsis root meristems. FEBS Lett. 483, 43-46.
24. Meijer, M. and Murray, J. (2001) Cell cycle controls and the development of plant form. Curr. Opin. Plant Biol. 4, 44-49.
25. Morse, RH. (2000) RAP, RAP, open up New wrinkles for RAP1 in yeast. Trends Genet. 16 (2), 51-53.
26. 1 to the S phase of the cell cycle. Physiol. Plant. 80, 95-101.
27. Pennacchio, L. and Rubin, E. (2001) Genomic strategies to identify mammalian regulatory sequences. Nat. Genet. 2, 100-109.
28. Regad, F., Hervé, C., Marinx, O., Bergounioux, C., Tremousaygue, D. and Lescure, B. (1995) The tef1 box, a ubiquitous cis-acting element involved in the activation of plant genes that are highly expressed in cycling cells. Mol. Gen. Genet. 248, 703-711.
29. Regad, F., Lebas, M. and Lescure, B. (1994) Interstitial telomere repeats within the Arabidopsis thaliana genome. J. Mol. Biol. 239, 163-169.
30. Richards, E. and Ausubel, F. (1988) Isolation of a higher eukaryotic telomere from Arabidopsis thaliana. Cell, 53, 127-136.
31. Riha, K., McKnight, T., Griffing, L. and Shippen, D. (2001) Living with genome instability: plant responses to telomere dysfunction. Science, 291, 1797-1800.
32. Riou-Khamlichi, C., Menges, M., Healy, S.M.J. and Murray, J.A.H. (2000) Sugar control of plant cell cycle: differential regulation of D-type cyclin gene expression. Mol. Cell. Biol. 20 (13), 4513-4521.
33. Rossignol, P., Stevens, R., Perennes, C., Jasinski, S., Cella, R., Tremousaygue, D. and Bergounioux, C. (2002) AtE2F-a and AtDP-a, members of the E2F family of transcription factors, induce Arabidopsis leaf cells to re-enter S phase. Mol. Genet. Genomics, 266 (6), 995-1003.
34. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
35. Scheer, I., Ludevid, M., Regad, F., Lescure, B. and Pont-Lezica, R. (1997) Expression of a gene encoding a ribosomal p40 protein and identification of an active promoter site. Plant Mol. Biol. 35, 905-913.
36. Shore, D. (1994) RAP1: a protein regulator in yeast. TIG, 10, 408-412. Shore, D. (1997) Telomere length regulation: getting the measure of chromosome ends. Biol. Chem. 378 (7), 591-597.
37. Stacey, D.W., Hitomi, M., Kanovsky, M., Gan, L. and Johnson, E.M. (1999) Cell cycle arrest and morphological alterations following microinjection of NIH3T3 cells with Pur alpha. Oncogene, 29, 4254-4261.
38. Tremousaygue, D., Manevski, A., Bardet, C., Lescure, N. and Lescure, B. (1999) Plant interstitial telomere motifs participate in the control of gene expression in root meristems. Plant J. 20, 553-561.
39. Van Lijsebettens, M., Vanderhaeghen, R., De Block, M., Bauw, G., Villaroel, R. and Van Montagu, M. (1994) An S18 ribosomal protein gene copy at the Arabidopsis PFL locus affects plant development by its specific expression in meristems. EMBO J. 13, 3378-3388.
40. Weijers, D., Franke-van Dijk, M., Venken, R-J., Quint, A., Hooykaas, P. and Offringa, R. (2001) An Arabidopsis minute-like phenotype caused by a semi-dominant mutation in a ribosomal protein S5 gene. Development, 128, 4289-4299.
41. Yu, E.Y. and Morse, R.H. (1999) Chromatin opening and transactivator potentiation by RAP1 in Saccharomyces cerevisiae. Mol. Cell Biol. 19 (18), 5279-5288.
42. Yu, E.Y., Kim, S.E., Kim, J.H., Ko, J.H., Cho, M.H. and Chung I.K. (2000) Sequence-specific binding DNA recognition by the Myb-like domain of plant telomeric protein RTTBP1. J. Biol. Chem. 275 (31), 24208-24214.