메뉴 건너뛰기




Volumn 30, Issue 5, 2008, Pages 477-485

Visualization of protein-protein interactions between bZIP transcription factors in the unfolded protein response using BiFC analysis

Author keywords

BiFC; ER stress; Living cells; Unfolded protein response (UPR); XBP1

Indexed keywords


EID: 56449118341     PISSN: 19769571     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (1)

References (45)
  • 2
    • 44449101173 scopus 로고    scopus 로고
    • ATF6 is a transcription factor specializing in the regulation of quality control proteins in the endoplasmic reticulum
    • Adachi Y, Yamamoto K, Okada T, Yoshida H, Harada A and Mori K (2008) ATF6 is a transcription factor specializing in the regulation of quality control proteins in the endoplasmic reticulum. Cell Struct. Funct. 33: 75-89.
    • (2008) Cell Struct. Funct , vol.33 , pp. 75-89
    • Adachi, Y.1    Yamamoto, K.2    Okada, T.3    Yoshida, H.4    Harada, A.5    Mori, K.6
  • 3
    • 34447121352 scopus 로고    scopus 로고
    • Role of the transcription factor ATF4 in the anabolic actions of insulin and the anti-anabolic actions of glucocorticoids
    • Adams CM (2007) Role of the transcription factor ATF4 in the anabolic actions of insulin and the anti-anabolic actions of glucocorticoids. J. Biol. Chem. 282: 16744-16753.
    • (2007) J. Biol. Chem , vol.282 , pp. 16744-16753
    • Adams, C.M.1
  • 4
    • 29744469033 scopus 로고    scopus 로고
    • XBP1 forms a regulatory loop with BMP-4 and suppresses mesodermal and neural differentiation in Xenopus embryos
    • Cao Y, Knochel S, Oswald F, Donow C, Zhao H and Knochel W (2006) XBP1 forms a regulatory loop with BMP-4 and suppresses mesodermal and neural differentiation in Xenopus embryos. Mech. Dev. 123: 84-96.
    • (2006) Mech. Dev , vol.123 , pp. 84-96
    • Cao, Y.1    Knochel, S.2    Oswald, F.3    Donow, C.4    Zhao, H.5    Knochel, W.6
  • 5
    • 0037066741 scopus 로고    scopus 로고
    • The luminal domain of ATF6 senses endoplasmic reticulum (ER) stress and causes translocation of ATF6 from the ER to the Golgi
    • Chen X, Shen J and Prywes R (2002) The luminal domain of ATF6 senses endoplasmic reticulum (ER) stress and causes translocation of ATF6 from the ER to the Golgi. J. Biol. Chem. 277: 13045-13052.
    • (2002) J. Biol. Chem , vol.277 , pp. 13045-13052
    • Chen, X.1    Shen, J.2    Prywes, R.3
  • 6
    • 48049117121 scopus 로고    scopus 로고
    • Localizing proteinprotein interactions by bimolecular fluorescence complementation in planta
    • Citovsky V, Gafni Y and Tzfira T (2008) Localizing proteinprotein interactions by bimolecular fluorescence complementation in planta. Methods 45: 196-206.
    • (2008) Methods , vol.45 , pp. 196-206
    • Citovsky, V.1    Gafni, Y.2    Tzfira, T.3
  • 7
    • 0033590451 scopus 로고    scopus 로고
    • Protein translation and folding are coupled by an endoplasmicreticulum-resident kinase
    • Harding HP, Zhang Y and Ron D (1999) Protein translation and folding are coupled by an endoplasmicreticulum-resident kinase. Nature 397: 271-274.
    • (1999) Nature , vol.397 , pp. 271-274
    • Harding, H.P.1    Zhang, Y.2    Ron, D.3
  • 8
    • 0032693671 scopus 로고    scopus 로고
    • Mammalian transcription factor ATF6 is synthesized as a transmembrane protein and activated by proteolysis in response to endoplasmic reticulum stress
    • Haze K, Yoshida H, Yanagi, H, Yura T and Mori K (1999) Mammalian transcription factor ATF6 is synthesized as a transmembrane protein and activated by proteolysis in response to endoplasmic reticulum stress. Mol. Biol. Cell 10: 3787-3799.
    • (1999) Mol. Biol. Cell , vol.10 , pp. 3787-3799
    • Haze, K.1    Yoshida, H.2    Yanagi, H.3    Yura, T.4    Mori, K.5
  • 10
    • 0037995710 scopus 로고    scopus 로고
    • Simultaneous visualization of multiple protein interactions in living cells using multicolor fluorescence complementation analysis
    • Hu CD and Kerppola TK (2003) Simultaneous visualization of multiple protein interactions in living cells using multicolor fluorescence complementation analysis. Nat. Biotechnol. 21: 539-545.
    • (2003) Nat. Biotechnol , vol.21 , pp. 539-545
    • Hu, C.D.1    Kerppola, T.K.2
  • 11
    • 48049112807 scopus 로고    scopus 로고
    • Multicolor BiFC analysis of competition among G protein beta and gamma subunit interactions
    • Hynes TR, Yost E, Mervine S and Berlot CH (2008) Multicolor BiFC analysis of competition among G protein beta and gamma subunit interactions. Methods 45: 207-213.
    • (2008) Methods , vol.45 , pp. 207-213
    • Hynes, T.R.1    Yost, E.2    Mervine, S.3    Berlot, C.H.4
  • 12
    • 35449002889 scopus 로고    scopus 로고
    • Over-expression of Chinese cabbage calreticulin 1b, BrCRT1b, induces initiation of organogenesis in Arabidopsis
    • Jin Z, Ryu S, Hong J, Song C, Lim C, Choi Y, Lee K, Chung W, Lee SY and Lim C (2007) Over-expression of Chinese cabbage calreticulin 1b, BrCRT1b, induces initiation of organogenesis in Arabidopsis. Kor. J. Genet. 29: 409-418.
    • (2007) Kor. J. Genet , vol.29 , pp. 409-418
    • Jin, Z.1    Ryu, S.2    Hong, J.3    Song, C.4    Lim, C.5    Choi, Y.6    Lee, K.7    Chung, W.8    Lee, S.Y.9    Lim, C.10
  • 13
    • 0033562966 scopus 로고    scopus 로고
    • Stress signaling from the lumen of the endoplasmic reticulum: Coordination of gene transcriptional and translational controls
    • Kaufman RJ (1999) Stress signaling from the lumen of the endoplasmic reticulum: coordination of gene transcriptional and translational controls. Genes Dev. 13: 1211-1233.
    • (1999) Genes Dev , vol.13 , pp. 1211-1233
    • Kaufman, R.J.1
  • 14
    • 0036853914 scopus 로고    scopus 로고
    • Orchestrating the unfolded protein response in health and disease
    • Kaufman RJ (2002). Orchestrating the unfolded protein response in health and disease. J. Clin. Invest. 110: 1389-1398.
    • (2002) J. Clin. Invest , vol.110 , pp. 1389-1398
    • Kaufman, R.J.1
  • 16
    • 48249132926 scopus 로고    scopus 로고
    • Bimolecular fluorescence complementation (BiFC) analysis as a probe of protein interactions in living cells
    • Kerppola TK (2008) Bimolecular fluorescence complementation (BiFC) analysis as a probe of protein interactions in living cells. Annu. Rev. Biophys. 37: 465-487.
    • (2008) Annu. Rev. Biophys , vol.37 , pp. 465-487
    • Kerppola, T.K.1
  • 17
    • 29244448729 scopus 로고    scopus 로고
    • XBP-1 is required for biogenesis of cellular secretory machinery of exocrine glands
    • Lee AH, Chu GC, Iwakoshi NN and Glimcher LH (2005) XBP-1 is required for biogenesis of cellular secretory machinery of exocrine glands. EMBO J. 24: 4368-4380.
    • (2005) EMBO J , vol.24 , pp. 4368-4380
    • Lee, A.H.1    Chu, G.C.2    Iwakoshi, N.N.3    Glimcher, L.H.4
  • 18
    • 0142059951 scopus 로고    scopus 로고
    • XBP-1 regulates a subset of endoplasmic reticulum resident chaperone genes in the unfolded protein response
    • Lee AH, Iwakoshi NN and Glimcher LH (2003) XBP-1 regulates a subset of endoplasmic reticulum resident chaperone genes in the unfolded protein response. Mol. Cell. Biol. 23: 7448-7459.
    • (2003) Mol. Cell. Biol , vol.23 , pp. 7448-7459
    • Lee, A.H.1    Iwakoshi, N.N.2    Glimcher, L.H.3
  • 19
    • 45849137877 scopus 로고    scopus 로고
    • Regulation of hepatic lipogenesis by the transcription factor XBP1
    • Lee AH, Scapa EF, Cohen DE and Glimcher LH (2008) Regulation of hepatic lipogenesis by the transcription factor XBP1. Science 320: 1492-1496.
    • (2008) Science , vol.320 , pp. 1492-1496
    • Lee, A.H.1    Scapa, E.F.2    Cohen, D.E.3    Glimcher, L.H.4
  • 20
    • 0037083755 scopus 로고    scopus 로고
    • IRE1-mediated unconventional mRNA splicing and S2P-mediated ATF6 cleavage merge to regulate XBP1 in signaling the unfolded protein response
    • Lee K, Tirasophon W, Shen X, Michalak M, Prywes R, Okada T, Yoshida H, Mori K and Kaufman RJ (2002) IRE1-mediated unconventional mRNA splicing and S2P-mediated ATF6 cleavage merge to regulate XBP1 in signaling the unfolded protein response. Genes Dev. 16: 452-466.
    • (2002) Genes Dev , vol.16 , pp. 452-466
    • Lee, K.1    Tirasophon, W.2    Shen, X.3    Michalak, M.4    Prywes, R.5    Okada, T.6    Yoshida, H.7    Mori, K.8    Kaufman, R.J.9
  • 21
    • 0030765016 scopus 로고    scopus 로고
    • Endoplasmic reticulum chaperones GRP78 and calreticulin prevent oxidative stress, Ca2+ disturbances, and cell death in renal epithelial cells
    • Uu H, Bowes RC, van de Water B, Sillence C, Nagelkerke JF and Stevens JL (1997) Endoplasmic reticulum chaperones GRP78 and calreticulin prevent oxidative stress, Ca2+ disturbances, and cell death in renal epithelial cells. J. Biol. Chem. 272: 21751-21759.
    • (1997) J. Biol. Chem , vol.272 , pp. 21751-21759
    • Uu, H.1    Bowes, R.C.2    van de Water, B.3    Sillence, C.4    Nagelkerke, J.F.5    Stevens, J.L.6
  • 22
    • 38349183257 scopus 로고    scopus 로고
    • Morell M, Espargaro A. Aviles FX and Ventura S (2008) Study and selection of in vivo protein interactions by coupling bimolecular fluorescence complementation and flow cytometry. Nat. Protoc. 3: 22-33.
    • Morell M, Espargaro A. Aviles FX and Ventura S (2008) Study and selection of in vivo protein interactions by coupling bimolecular fluorescence complementation and flow cytometry. Nat. Protoc. 3: 22-33.
  • 23
    • 0034716887 scopus 로고    scopus 로고
    • Tripartite management of unfolded proteins in the endoplasmic reticulum
    • Mori K (2000) Tripartite management of unfolded proteins in the endoplasmic reticulum. Cell 101: 451-454.
    • (2000) Cell , vol.101 , pp. 451-454
    • Mori, K.1
  • 24
    • 33846223428 scopus 로고    scopus 로고
    • Role of disulfide bridges formed in the luminal domain of ATF6 in sensing endoplasmic reticulum stress
    • Nadanaka S, Okada T, Yoshida H and Mori K (2007) Role of disulfide bridges formed in the luminal domain of ATF6 in sensing endoplasmic reticulum stress. Mol. Cell. Biol. 27: 1027-1043.
    • (2007) Mol. Cell. Biol , vol.27 , pp. 1027-1043
    • Nadanaka, S.1    Okada, T.2    Yoshida, H.3    Mori, K.4
  • 25
    • 1642413540 scopus 로고    scopus 로고
    • The endoplasmic reticulum stress response is stimulated through the continuous activation of transcription factors ATF6 and XBP1 in Ins2+/ Akita pancreatic beta cells
    • Nozaki J. Kubota H. Yoshida H. Naitoh M. Goji J. Yoshinaga T, Mori K, Koizumi A and Nagata K (2004) The endoplasmic reticulum stress response is stimulated through the continuous activation of transcription factors ATF6 and XBP1 in Ins2+/ Akita pancreatic beta cells. Genes Cells 9: 261-270.
    • (2004) Genes Cells , vol.9 , pp. 261-270
    • Nozaki, J.1    Kubota, H.2    Yoshida, H.3    Naitoh, M.4    Goji, J.5    Yoshinaga, T.6    Mori, K.7    Koizumi, A.8    Nagata, K.9
  • 26
    • 47649102147 scopus 로고    scopus 로고
    • ATF4-dependent transcription is a key mechanism in VEGF up-regulation by oxidized phospholipids: Critical role of oxidized sn-2 residues in activation of unfolded protein response
    • Oskolkova OV, Afonyushkin T, Leitner A, von Schlieffen E, Gargalovic PS, Lusis AJ, Binder BR and Bochkov VN (2008). ATF4-dependent transcription is a key mechanism in VEGF up-regulation by oxidized phospholipids: critical role of oxidized sn-2 residues in activation of unfolded protein response. Blood 112: 330-339.
    • (2008) Blood , vol.112 , pp. 330-339
    • Oskolkova, O.V.1    Afonyushkin, T.2    Leitner, A.3    von Schlieffen, E.4    Gargalovic, P.S.5    Lusis, A.J.6    Binder, B.R.7    Bochkov, V.N.8
  • 27
    • 50549094706 scopus 로고    scopus 로고
    • A close link between metabolic methionine pathway and methylation of histone 3 lysine 9 (H3K9)
    • Park J and Kim K (2008) A close link between metabolic methionine pathway and methylation of histone 3 lysine 9 (H3K9). Kor. J. Genet. 30: 11-16.
    • (2008) Kor. J. Genet , vol.30 , pp. 11-16
    • Park, J.1    Kim, K.2
  • 30
    • 0036856008 scopus 로고    scopus 로고
    • Translational control in the endoplasmic reticulum stress response
    • Ron D (2002) Translational control in the endoplasmic reticulum stress response. J. Clin. Invest. 110: 1383-1388.
    • (2002) J. Clin. Invest , vol.110 , pp. 1383-1388
    • Ron, D.1
  • 31
    • 48649103713 scopus 로고    scopus 로고
    • Multiple pathways are involved in the anoxia response of SKIP3 including HuR-regulated RNA stability, NF-kappaB and ATF4
    • Rzymski T, Paantjens A, Bod J and Harris AL (2008). Multiple pathways are involved in the anoxia response of SKIP3 including HuR-regulated RNA stability, NF-kappaB and ATF4. Oncogene 27: 4532-4543.
    • (2008) Oncogene , vol.27 , pp. 4532-4543
    • Rzymski, T.1    Paantjens, A.2    Bod, J.3    Harris, A.L.4
  • 32
    • 48049097290 scopus 로고    scopus 로고
    • Visualizing protein interactions by bimolecular fluorescence complementation in Xenopus
    • Saka Y, Hagemann Al and Smith JC (2008) Visualizing protein interactions by bimolecular fluorescence complementation in Xenopus. Methods 45: 192-195.
    • (2008) Methods , vol.45 , pp. 192-195
    • Saka, Y.1    Hagemann, A.2    Smith, J.C.3
  • 33
    • 3142658576 scopus 로고    scopus 로고
    • XBP1, downstream of Blimp-1, expands the secretory apparatus and other organelles, and increases protein synthesis in plasma cell differentiation
    • Shaffer AL, Shapiro-Shelef M, Iwakoshi NN, Lee AH, Qian SB, Zhao H, Yu X, Yang L, Tan BK, Rosenwald A et al. (2004) XBP1, downstream of Blimp-1, expands the secretory apparatus and other organelles, and increases protein synthesis in plasma cell differentiation. Immunity 21: 81-93.
    • (2004) Immunity , vol.21 , pp. 81-93
    • Shaffer, A.L.1    Shapiro-Shelef, M.2    Iwakoshi, N.N.3    Lee, A.H.4    Qian, S.B.5    Zhao, H.6    Yu, X.7    Yang, L.8    Tan, B.K.9    Rosenwald, A.10
  • 34
    • 1842426663 scopus 로고    scopus 로고
    • Discordance of UPR signaling by ATF6 and Irelp-XBP1 with levels of target transcripts
    • Shang J and Lehrman MA (2004) Discordance of UPR signaling by ATF6 and Irelp-XBP1 with levels of target transcripts. Biochem. Biophy. Res. Commun. 317: 390-396.
    • (2004) Biochem. Biophy. Res. Commun , vol.317 , pp. 390-396
    • Shang, J.1    Lehrman, M.A.2
  • 35
    • 18244405070 scopus 로고    scopus 로고
    • Complementary signaling pathways regulate the unfolded protein response and are required for C. elegans development
    • Shen X, Ellis RE, Lee K, Liu CY, Yang K, Solomon A, Yoshida H, Morimoto R, Kurnit DM, Mori K et al. (2001) Complementary signaling pathways regulate the unfolded protein response and are required for C. elegans development. Cell 107: 893-903.
    • (2001) Cell , vol.107 , pp. 893-903
    • Shen, X.1    Ellis, R.E.2    Lee, K.3    Liu, C.Y.4    Yang, K.5    Solomon, A.6    Yoshida, H.7    Morimoto, R.8    Kurnit, D.M.9    Mori, K.10
  • 36
    • 34547933706 scopus 로고    scopus 로고
    • Effects of the isoform-specific characteristics of ATF6 alpha and ATF6 beta on endoplasmic reticulum stress response gene expression and cell viability
    • Thuerauf DJ, Marcinko M, Belmont PJ and Glembotski CC (2007). Effects of the isoform-specific characteristics of ATF6 alpha and ATF6 beta on endoplasmic reticulum stress response gene expression and cell viability. J. Biol. Chem. 282: 22865-22878.
    • (2007) J. Biol. Chem , vol.282 , pp. 22865-22878
    • Thuerauf, D.J.1    Marcinko, M.2    Belmont, P.J.3    Glembotski, C.C.4
  • 37
    • 0032525990 scopus 로고    scopus 로고
    • A stress response pathway from the endoplasmic reticulum to the nucleus requires a novel bifunctional protein kinase/endoribonuclease (Irelp) in mammalian cells
    • Tirasophon W, Welihinda AA and Kaufman RJ (1998) A stress response pathway from the endoplasmic reticulum to the nucleus requires a novel bifunctional protein kinase/endoribonuclease (Irelp) in mammalian cells. Genes Dev. 12: 1812-1824.
    • (1998) Genes Dev , vol.12 , pp. 1812-1824
    • Tirasophon, W.1    Welihinda, A.A.2    Kaufman, R.J.3
  • 39
    • 54349105689 scopus 로고    scopus 로고
    • Waadt R, Schmidt LK, Lohse M, Hashimoto K, Bock R and Kudla J (2008) Multicolor bimolecular fluorescence complementation (mcBiFC) reveals simultaneous formation of alternative CBL/CIPK complexes in planta. Plant J. (On-line pressed)
    • Waadt R, Schmidt LK, Lohse M, Hashimoto K, Bock R and Kudla J (2008) Multicolor bimolecular fluorescence complementation (mcBiFC) reveals simultaneous formation of alternative CBL/CIPK complexes in planta. Plant J. (On-line pressed)
  • 40
    • 0034282912 scopus 로고    scopus 로고
    • Activation of ATF6 and an ATF6 DNA binding site by the endoplasmic reticulum stress response
    • Wang Y, Shen J, Arenzana N, Tirasophon W, Kaufman RJ and Prywes R (2000) Activation of ATF6 and an ATF6 DNA binding site by the endoplasmic reticulum stress response. J. Biol. Chem. 275: 27013-27020.
    • (2000) J. Biol. Chem , vol.275 , pp. 27013-27020
    • Wang, Y.1    Shen, J.2    Arenzana, N.3    Tirasophon, W.4    Kaufman, R.J.5    Prywes, R.6
  • 41
    • 34548172495 scopus 로고    scopus 로고
    • Transcriptional induction of mammalian ER quality control proteins is mediated by single or combined action of ATF6 alpha and XBP1
    • Yamamoto K, Sato T, Matsui T, Sato M, Okada T, Yoshida H, Harada A and Mori K. (2007). Transcriptional induction of mammalian ER quality control proteins is mediated by single or combined action of ATF6 alpha and XBP1. Dev. Cell 13: 365-376.
    • (2007) Dev. Cell , vol.13 , pp. 365-376
    • Yamamoto, K.1    Sato, T.2    Matsui, T.3    Sato, M.4    Okada, T.5    Yoshida, H.6    Harada, A.7    Mori, K.8
  • 42
    • 53549098817 scopus 로고    scopus 로고
    • Yamamoto K, Suzuki N, Wada T, Okada T, Yoshida, H., Kaufman RJ and Mori K (2008). Human HRD1 Promoter Carries a Functional Unfolded Protein Response Element to Which XBP1 but not ATF6 Directly Binds. J. Biochem. (On-line pressed)
    • Yamamoto K, Suzuki N, Wada T, Okada T, Yoshida, H., Kaufman RJ and Mori K (2008). Human HRD1 Promoter Carries a Functional Unfolded Protein Response Element to Which XBP1 but not ATF6 Directly Binds. J. Biochem. (On-line pressed)
  • 43
    • 9144228073 scopus 로고    scopus 로고
    • Differential contributions of ATF6 and XBP1 to the activation of endoplasmic reticulum stress-responsive cis-acting elements ERSE, UPRE and ERSE-II
    • Yamamoto K, Yoshida H, Kokame K, Kaufman RJ and Mori K (2004). Differential contributions of ATF6 and XBP1 to the activation of endoplasmic reticulum stress-responsive cis-acting elements ERSE, UPRE and ERSE-II. J. Biochem. 136: 343-350.
    • (2004) J. Biochem , vol.136 , pp. 343-350
    • Yamamoto, K.1    Yoshida, H.2    Kokame, K.3    Kaufman, R.J.4    Mori, K.5
  • 44
    • 0033815971 scopus 로고    scopus 로고
    • ATF6 activated by proteolysis binds in the presence of NF-Y (CBF) directly to the cis-acting element responsible for the mammalian unfolded protein response
    • Yoshida H, Okada T, Haze K, Yanagi H, Yura T, Negishi M and Mori K (2000) ATF6 activated by proteolysis binds in the presence of NF-Y (CBF) directly to the cis-acting element responsible for the mammalian unfolded protein response. Mol. Cell. Biol. 20: 6755-6767.
    • (2000) Mol. Cell. Biol , vol.20 , pp. 6755-6767
    • Yoshida, H.1    Okada, T.2    Haze, K.3    Yanagi, H.4    Yura, T.5    Negishi, M.6    Mori, K.7
  • 45
    • 32644432826 scopus 로고    scopus 로고
    • pXBP1(U) encoded in XBP1 pre-mRNA negatively regulates unfolded protein response activator pXBP1(S) in mammalian ER stress response
    • Yoshida H, Oku M, Suzuki M and Mori K (2006) pXBP1(U) encoded in XBP1 pre-mRNA negatively regulates unfolded protein response activator pXBP1(S) in mammalian ER stress response. J. Cell Biol. 172: 565-575.
    • (2006) J. Cell Biol , vol.172 , pp. 565-575
    • Yoshida, H.1    Oku, M.2    Suzuki, M.3    Mori, K.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.