Low levels of quantitative and molecular genetic differentiation among natural populations of Medicago ciliaris Kroch. (Fabaceae) of different Tunisian eco-geographical origin

Conservation Genetics

Volumn 9, Issue 6, 2008, Pages 1509-1520

  Badri, Mounawer ^a   Zitoun, Adel ^a   Soula, Sameh ^a   Ilahi, Houcine ^a,b   Huguet, Thierry ^c   Aouani, Mohamed Elarbi ^a  

^a CENTRE DE BIOTECHNOLOGIE DE BORJ CÉDRIA   (Tunisia)

^b UNIVERSITY OF CARTHAGE   (Tunisia)

^c UNIVERSITÉ DE TOULOUSE   (France)

Author keywords

Eco geographical factors; FST; Genetic variability; M. ciliaris; QST

Indexed keywords

ALTITUDE; DIVERGENCE; ENVIRONMENTAL FACTOR; GENETIC DIFFERENTIATION; GENETIC MARKER; GENETIC STRUCTURE; GENETIC VARIATION; LEGUME; NATURAL SELECTION; QUANTITATIVE ANALYSIS; SOIL TEXTURE;

FABACEAE; MEDICAGO; MEDICAGO CILIARIS; MEDICAGO TRUNCATULA;

EID: 55949115403     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-007-9483-z     Document Type: Article

References (61)

1. A Abdelkefi M Boussaid A Biborchi A Haddioui A Salhi-Hannachi M Marrakchi 1996 Genetic diversity inventory and evaluation of spontaneous species belonging to Medicago L. genus in Tunisia Cah Options Méditerr 18 143 149
2. Badri M, Zribi K, Soula S, Lazrek F, Badri Y, Khaldi M, Yousfi N, Djebali N, Huguet T, Aouani ME (2004a) Specificities and usefulness of medics-sinorhizobia symbioses in Tunisian areas: preliminary assessment of the statement. In: Abstracts of the 5th Tunisian-Japanese on Culture, Science and Technology, Sfax, Tunisia
3. Badri M, Huguet T, Aouani ME (2004b) Comparison of quantitative genetic traits among natural populations of the model legume Medicago truncatula in Tunisian arid areas. In: Abstracts of arid regions of aridoculture et cultures oasiennes, Djerba, Tunisia
4. M Badri H Ilahi T Huguet ME Aouani 2007 Quantitative and molecular genetic variation in sympatric populations of Medicago laciniata and M. truncatula (Fabaceae): relationships with eco-geographical factors Genet Res 89 107 122
5. DG Barker S Bianchi F London Y Datee G Duc S Essad P Flament P Gallusci G Génier P Guy X Muel J Tourneur J Dénarié T Huguet 1990 Medicago truncatula, a model for studying the molecular genetics of the Rhizobium-legume symbiosis Plant Mol Biol Rep 8 40 49
6. Belkhir K (2001) Genetix software, version 4.01. Laboratoire Génome, Populations, Interactions, CNRS UPR 9060, Montpellier, France (genetix@crit.univ-montp2.fr)
7. G Bena JM Prosperi B Lejeune I Olivieri 1998 Evolution of annual species of the genus Mediacgo: a molecular phylogenetic approach J Mol Evol 9 3 552 559
8. EL Berlow CM D'Antonio SA Reynolds 2002 Shrub expansion in montane meadows: the interaction of local-scale disturbance and site aridity Ecol Appl 12 1103 1118
9. I Bonnin JM Prosperi I Olivieri 1996 Genetic markers and quantitative genetic variation in Medicago truncatula (Leguminoseae): a comparative analysis of population structure Genetics 143 1795 1805
10. I Bonnin JM Prosperi I Olivieri 1997 Comparison of quantitative genetic parameters between two natural populations of a selfing plant species, Medicago truncatula Gaertn Theor Appl Genet 94 641 651
11. D Charlesworth 2003 Effects of inbreeding on the genetic diversity of populations Philos Trans R Soc B 358 1434 1051 1570
12. Clausen JD, Keck D, Hiesey WM (1940) Experimental studies on the nature of species. In: Effect of varied environments on western North American plants. Carnegie Institute of Washington, Washington, DC
13. P Crnokrak DA Roff 1995 Dominance variance-associations with selection and fitness Heredity 75 530 540
14. JM Cruse-Sanders JL Hamrick 2004 Spatial and genetic structure within populations of wild American ginseng (Panax quinquefolius L., Araliaceae) J Hered 95 4 309 321
15. I Eujayl MK Sledge L Wang GD May K Chekhovskiy JC Zwonitzer MAR Mian 2004 Medicago truncatula EST-SSRs reveal cross-species genetic markers for Medicago spp Theor Appl Genet 108 414 422
16. Falconer DS, MacKay TFC (1996) Introduction to quantitative genetics, 4th edn. Longman Group Ltd, London
17. M Gherardi B Mangin D Bonnet B Goffinet T Huguet 1998 A method to measure genetic distance between allogamous populations of alfalfa (Medicago sativa) using RAPD molecular markers Theor Appl Genet 96 406 412
18. MA Gitzendanner PS Soltis 2000 Patterns of genetic variation in rare and widespread plant congeners Am J Bot 87 783 792
19. I Gomez-Mestre M Tejedo 2004 Contrasting patterns of quantitative and neutral genetic variation in locally adapted populations of the natterjack toad, Bufo calamita Evolution 58 10 2343 2352
20. J Goudet 1995 FSTAT, version 1.2. A computer program to calculate F-statistics J Hered 86 485 486
21. MV Gutierrez MC Vaz Patto T Huguet JI Cubero MT Moreno AM Torres 2005 Cross-species amplification of Medicago truncatula microsatellites across three major pulse crops Theor Appl Genet 110 1210 1217
22. OJ Hardy X Vekemans 2002 SPAGeDi: a versatile computer program to analyse spatial genetic structure at the individual or population levels Mol Ecol Notes 2 618 620
23. QY Huang A Beharav UC Youchun V Kirzhner E Nevo 2002 Mosaic microecological differential stress causes adaptive microsatellite divergence in wild barley, Hordeum spontaneum, at Neve Yaar, Israel Genome 45 1216 1229
24. H Innan R Terauchi NT Miyashita 1997 Microsatellite polymorphism in natural populations of wild plant Arabidopsis thaliana Genetics 146 1441 1452
25. N Isabel J Beaulieu P Thériault J Bousquet 1999 Direct evidence for biased gene diversity estimates from dominant random amplified polymorphic DNA (RAPD) fingerprints Mol Ecol 8 477 483
26. V Ivandic CA Hackett E Nevo R Keith WTB Thomas BP Forster 2002 Analysis of simple sequence repeats (SSRs) in wild barley from the Fertile Crescent: associations with ecology, geography and flowering time Plant Mol Biol 48 511 527
27. JP Jaramillo-Correa J Beaulieu J Bousquet 2001 Contrasting evolutionary forces driving population structure at expressed sequence tag polymorphisms, allozymes and quantitative traits in white spruce Mol Ecol 10 2729 2740
28. B Julier S Flajoulot P Barre G Cardinet S Santoni T Huguet C Huyghe 2003 Construction of two genetic linkage maps in cultivated tetraploid alfalfa (Medicago sativa) using microsatellite and AFLP markers BMC Plant Biol 3 9
29. AS Jump J Penuelas 2005 Running to stand still: adaptation and the response of plants to rapid climate change Ecol Lett 8 1010 1020
30. Y Kashi D King M Soller 1997 Simple sequence repeats as a source of quantitative variation Trends Genet 13 74 78
31. A Kremer A Zanetto A Ducousso 1997 Multilocus and multitrait measures of differentiation for gene markers and phenotypic traits Genetics 145 1229 1241
32. Lesins KA, Lesins I (1979) Genus Medicago (Leguminosae). A Taxogenetic Study. The Hague, The Netherlands
33. Y Li MS Röder T Fahima A Beiles A Korol E Nevo 2000 Natural selection causing microsatellite divergence in wild emmer wheat at the ecologically variable microsite at Ammiad, Israel Theor Appl Genet 100 985 999
34. YC Li T Krugman T Fahima A Beiles AB Korol E Nevo 2001 Spatiotemporal allozyme divergence caused by aridity stress in a natural population of wild wheat, Triticum dicoccoides, at the Ammiad microsite, Israel Theor Appl Genet 102 853 864
35. BA Loiselle VL Sork J Nason C Graham 1995 Spatial genetic structure of a tropical understory shrub, Psychotria officinalis (Rubiaceae) Am J Bot 82 1420 1425
36. C Lopez-Fanjul A Fernandez MA Toro 2003 The effect of neutral nonadditive gene action on the quantitative index of population divergence Genetics 164 1627 1633
37. N Mantel 1967 The detection of disease clustering and a generalized regression approach Cancer Res 27 1055 1067
38. J Merilä P Crnokrak 2001 Comparison of differentiation at marker loci and quantitative traits J Evol Biol 14 892 903
39. JB Mitton KL Duran 2004 Genetic variation in pinon pine, Pinus edulis, associated with summer precipitation Mol Ecol 13 1259 1264
40. M Nei 1978 Estimation of average heterozygosity and genetic distance from a small number of individuals Genetics 89 583 590
41. JU Palo RB O'Hara AT Laugen A Laurila CR Primmer J Merilä 2003 Latitudinal divergence of common frog (Rana temporaria) life history traits by natural selection: evidence from a comparison of molecular and quantitative genetic data Mol Ecol 13 2865 2869
42. Perrier X, Jacquemoud-Collet JP (2006) DARwin software version 5.0.148 (http://darwin.cirad.fr/darwin)
43. ST between allozymes and morphological traits Genetics 140 733 744
44. Pottier-Alapetite G (1979) Flore de la Tunisie, Angiospermes, dicotylédones, Apétales-Dialypétales. Publications scientifiques tunisiennes, Tunis
45. G Pressoir J Berthaud 2004 Population structure and strong divergent selection shape phenotypic diversification in maize landraces Heredity 92 95 101
46. DH Reed R Frankham 2001 How closely correlated are molecular and quantitative measures of genetic variation? A meta-analysis Evolution 55 1095 1103
47. Rogers SO, Bendish AJ (1988) Extraction of DNA from plant tissues. In: Gelvin SB, Schiperoot RA (eds) Plant molecular biology manual. Kluwer, Academic publishers, Dordrecht Boston London
48. F Rousset 1997 Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance Genetics 145 1219 1228
49. B Saal J Plieske J Hu CF Quiros D Struss 2001 Microsatellite markers for genome analysis in Brassica. II. Assignment of rapeseed microsatellites to the A and C genomes and genetic mapping in Brassica oleracea L Theor Appl Genet 102 695 699
50. SAS Institute (1998) SAS/STAT User' Guide, version 70. SAS Institute Inc, Cary NC
51. MK Shrestha A Golan-Goldhirsh D Ward 2002 Population genetic structure and the conservation of isolated populations of Acacia raddiana in the Negev Desert Biol Conserv 108 119 127
52. K Spitze 1993 Population structure in Daphnia obtusa: quantitative genetic and allozymic variation Genetics 135 367 374
53. HK Stenoien CB Fenster A Tonteri O Savolainen 2005 Genetic variability in natural populations of Arabidopsis thaliana in northern Europe Mol Ecol 14 137 148
54. G Turesson 1925 The plant species in relation to habitat and climate Hereditas 6 147 236
55. T Turpeinen T Tenhola O Manninen E Nevo E Nissilä 2001 Microsatellite diversity associated with ecological factors in Hordeum spontaneum populations in Israel Mol Ecol 10 1577 1591
56. F Van Rosum I Bonnin S Fénart M Pauwels D Petit P Saumitou-Laprade 2004 Spatial genetic structure within a metallicolous population of Arabidopsis halleri, a clonal, self-incompatible and heavy-metal-tolerant species Mol Ecol 13 2959 2967
57. ST at two spatial scales Heredity 95 466 475
58. S Volis B Yakubov I Shulgina D Ward V Zur S Mendlinger 2001 Tests for adaptive RAPD variation in population genetic structure of wild barley, Hordeum spontaneum Koch Biol J Linn Soc 74 289 303
59. BS Weir CC Cockerham 1984 Estimating F-statistics for the analysis of population structure Evolution 38 1358 1370
60. J Zhan CC Linde T Jürgens U Merz F Steinebrunner BA Mc Donald 2005 Variation for neutral markers is correlated with variation for quantitative traits in the plant pathogenic fungus Mycosphaerella graminicola Mol Ecol 14 2683 2693
61. K Zribi Y Badri S Saidi P van Berkum ME Aouani 2007 Medicago ciliaris growing in Tunisian soils is preferentially nodulated by Sinorhizobium medicae Aust J Soil Res 45 473 477