Microsatellite diversity associated with ecological factors in Hordeum spontaneum populations in Israel

Molecular Ecology

Volumn 10, Issue 6, 2001, Pages 1577-1591

  Turpeinen, Timo ^a   Tenhola, Teija ^a   Manninen, Outi ^a   Nevo, Eviatar ^b   Nissilä, Eero ^c  

^a PLANT PRODUCTION RESEARCH   (Finland)

^b UNIVERSITY OF HAIFA   (Israel)

^c Boreal Plant Breeding Ltd   (Finland)

Author keywords

Genetic diversity; Hordeum spontaneum; Microsatellites; Natural selection; Niche; Population subdivision; Simple sequence repeats

Indexed keywords

ARID ENVIRONMENT; GENETIC DIVERSITY; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; ISRAEL; MICROSATELLITE DNA; MOLECULAR ECOLOGY; PRINCIPAL COMPONENT ANALYSIS; REGRESSION ANALYSIS; SIMPLE SEQUENCE REPEAT; WILD RELATIVE;

ECOLOGY; GENES, PLANT; GENETICS, POPULATION; HORDEUM; ISRAEL; MICROSATELLITE REPEATS; MODELS, BIOLOGICAL; POLYMORPHISM, GENETIC; REGRESSION ANALYSIS; SELECTION (GENETICS);

EID: 0034994557     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294X.2001.01281.x     Document Type: Article

References (66)

1. Geographic variation of cα-amylase, β-amylase, pullulanase and chitinase activity in germinating Hordeum spontaneum barley from Israel and Jordan
2. Microsatellite variation and evolution in the Mimulus guttatus species complex with contrasting mating system
3. On the origin and domestication history of barley (Hordeum vulgare)
4. Genetic diversity in wild barley (Hordeum spontaneum C. Koch) in the Near East: A molecular analysis using random amplified polymorphic DNA (RAPD) markers
5. Barley microsatellites: Allele variation and mapping
6. Grain isozyme and ribosomal DNA variability in Hordeum spontaneum populations from Israel
7. A cDNA-based comparison of dehydration-induced proteins (dehydrins) in barley and corn
8. Detection and analysis of genetic variation in Hordeum spontaneum populations from Israel using RAPD markers
9. Mutational processes of simple sequence repeat loci in human populations
10. Microsatellite DNA polymorphism and divergence in Triticum dicoccoides accessions highly resistant to yellow rust
11. Locating genotypes and genes for abiotic stress tolerance in barley: A strategy using maps, markers and the wild species
12. Microsatellite allele frequencies in human and chimpanzees, with implications for constraints on allele size
13. The evolution of tandemly repetitive DNA: Recombination rules
14. Distribution of wild wheats and barley
15. Microsatellite DNA in Actinidia chinensis: Isolation, characterisation, and homology in related species
16. Microsatellite polymorphism in natural populations of wild plant Arabidopsis thaliana
17. Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence
18. Simple sequence repeats as a source of quantitative genetic variation
19. Variation and fidelity: The evolution of simple sequence repeats as functional elements in adjustable genes
20. The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates
21. The cradle of agriculture
22. Slipped strand mispairing: A major mechanism for DNA sequence evolution
23. Microsatellite diversity correlated with ecological-edaphic and genetic factors in three microsites of wild emmer wheat in north Israel
24. Natural selection causing microsatellite divergence in wild emmer wheat at the ecologically variable microsite at Ammiad, Israel
25. Edaphic microsatellite DNA divergence in wild emmer wheat, Triticum dicoccoides, at a microsite: Tabigha, Israel
26. Development of simple sequence repeat DNA markers and their integration into a barley linkage map
27. PCR-amplified microsatellites as markers in plant genetics
28. Genetic mapping and variability of seven soybean single sequence repeat loci
29. Analysis of gene diversity in subdivided populations
30. Accuracy of estimated phylogenetic trees from molecular data
31. Origin, evolution, population genetics and resources for breeding of wild barley Hordeum spontaneum, in the Fertile Crescent
32. Genetic diversity in wild cereals: Regional and local studies and their bearing on conservation ex situ and in situ
33. Natural selection causes microscale allozyme diversity in wild barley and a lichen at 'Evolution Canyon' Mt. Carmel, Israel
34. Ecological correlates of RAPD DNA diversity of wild barley, Hordeum spontaneum, in the Fertile Crescent
35. Genetic resources of wild cereals in Israel and vicinity. II. Phenotypic variation within and between populations of wild barley, Hordeum spontaneum
36. Natural selection of allozyme polymorphism: A microsite test revealing ecological genetic differentiation in wild barley
37. Genetic resources of wild barley in the Near East: Structure, evolution and application in breeding
38. Microgeographic edaphic differentation in allozyme polymorphisms of wild barley (Hordeum spontaneum, Poaceae)
39. Genetic diversity and environmental associations of wild barley Hordeum spontaneum, in Israel
40. Phylogenetic assessment of length variation at a microsatellite locus
41. Population genetics response to microsite ecological stress in wild barley, Hordeum spontaneum
42. AFLP variation in wild barley (Hordeum spontaneum C. Koch) with reference to salt tolerance and associated ecogeography
43. Microsatellite tagging of the stripe-rust resistance gene YrH52 derived from wild emmer wheat, Triticum dicoccoides, and suggestive negative crossover interference on chromosome 1B
44. Detection of genetic diversity in closely related bread wheat using microsatellite markers
45. Discriminating between barley genotypes using microsatellite markers
46. A microsatellite map of wheat
47. Extraordinarily polymorphic microsatellite DNA in barley: Spedes diversity, chromosomal locations, and population dynamics
48. Comparison of restriction fragment length polymorphisms in wild and cultivated barley
49. VNTR allele frequency distributions under the stepwise mutation model: A computer simulation approach
50. Hitchhiking and associative overdominance at a microsatellite locus
51. Possible role of natural selection in the formation of tandem repetitive noncoding DNA
52. Persistence of microsatellite arrays in finite populations
53. Hypervariability of simple sequences as a general source for polymorphic DNA markers
54. Simple sequences are ubiquitous repetitive components of eukaryotic genomes
55. Microsatellite repeats in grapevine reveal DNA polymorphisms when analyzed as sequence-tagged sites (STSs)
56. Random amplified polymorphic DNA and pedigree relationships in spring barley
57. Genome size variation in Hordeum spontaneum populations
58. Allele frequencies at microsatellite loci: The stepwise mutation model revisited
59. Evolution of microsatellite in Arabis petraea and Arabis lyrata, outcrossing relatives of Arabidopsis thaliana
60. Morphological variation and width of ecological niche
61. Molecular analysis of the DNA polymorphism of wild barley (Hordeum spontaneum) germplasm using the polymerase chain reaction
62. Comparative diversity analysis of RFLPs and isozymes within and among populations of Hordeum vulgare ssp. spontaneum