Streptomyces specialis sp. nov

International Journal of Systematic and Evolutionary Microbiology

Volumn 58, Issue 11, 2008, Pages 2602-2606

  Kämpfer, Peter ^a   Huber, Birgit ^b   Buczolits, Sandra ^b   Thummes, Kathrin ^a   Grün Wollny, Iris ^c   Busse, Hans Jürgen ^b  

^a JUSTUS LIEBIG UNIVERSITY   (Germany)

^b UNIVERSITY OF VETERINARY MEDICINE   (Austria)

^c Labor Grun Wollny   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

CARDIOLIPIN; PHOSPHATIDYLETHANOLAMINE; PHOSPHATIDYLGLYCEROL; PHOSPHATIDYLINOSITOL; RNA 16S;

ARTICLE; BACTERIAL METABOLISM; BACTERIAL STRAIN; BACTERIUM ISOLATION; CONTROLLED STUDY; FATTY ACID ANALYSIS; GENE SEQUENCE; GRAM POSITIVE BACTERIUM; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; SOIL; SPECIES COMPARISON; SPECIES DIFFERENTIATION; STREPTOMYCES; STREPTOMYCES CACAOI; STREPTOMYCES HAINANENSIS; STREPTOMYCES SPECIALIS; STREPTOMYCETACEAE;

BACTERIAL TYPING TECHNIQUES; DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; GENES, RRNA; MOLECULAR SEQUENCE DATA; PHENOTYPE; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SOIL MICROBIOLOGY; SPECIES SPECIFICITY; STREPTOMYCES;

BACTERIA (MICROORGANISMS); POSIBACTERIA; STREPTOMYCES; STREPTOMYCES CACAOI; STREPTOMYCES CACAOI SUBSP. CACAOI;

EID: 55849101666     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.2008/001008-0     Document Type: Article

References (32)

1. Atalan, E., Manfio, G. P., Ward, A. C., Kroppenstedt, R. M. & Goodfellow, M. (2000). Biosystematic studies on novel streptomyces from soil. Antonie van Leeuwenhoek 77, 337-353.
2. Gerhardt, P., Murray, R. G. E., Wood, W. A. & Krieg, N. R. (editors) (1994). Methods for General and Molecular Bacteriology. Washington, DC: American Society for Microbiology.
3. Goodfellow, M., Kumar, Y., Labeda, D. P. & Sembiring, L. (2007). The Streptomyces violaceusniger clade: a home for streptomycetes with rugose ornamented spores. Antonie van Leeuwenhoek 92, 173-199.
4. Jiang, Y., Tang, S.-K., Wiese, J., Xu, L.-H., Imhoff, J. F. & Jiang, C.-L. (2007). Streptomyces hainanensis sp. nov., a novel member of the genus Streptomyces. Int J Syst Evol Microbiol 57, 2694-2698.
5. Kämpfer, P. (2006). The family Streptomycetaceae. Part I. Taxonomy. In The Prokaryotes: a Handbook on the Biology of Bacteria, 3rd edn, vol. 3, pp. 538-604. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
6. Kämpfer, P. & Kroppenstedt, R. M. (1996). Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 42, 989-1005.
7. Kämpfer, P. & Labeda, D. P. (2003). International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Streptomycetaceae. Minutes of the meeting, 30 July 2002, Paris, France. Int J Syst Evol Microbiol 53, 925.
8. Kämpfer, P. & Labeda, D. P. (2006). International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of the Streptomycetaceae. Minutes of the meeting, 25 July 2005, San Francisco, CA, USA. Int J Syst Evol Microbiol 56, 495.
9. Kämpfer, P., Kroppenstedt, R. M. & Dott, W. (1991). A numerical classification of the genera Streptomyces and Streptoverticillium using miniaturized physiological tests. J Gen Microbiol 137, 1831-1891.
10. Kämpfer, P., Dreyer, U., Neef, A., Dott, W. & Busse, H.-J. (2003). Chryseobacterium defluvii sp. nov., isolated from wastewater. Int J Syst Evol Microbiol 53, 93-97.
11. Kim, S. B. & Goodfellow, M. (2002). Streptomyces thermospinisporus sp. nov., a moderately thermophilic caboxydotrophic streptomycete isolated from soil. Int J Syst Evol Microbiol 52, 1225-1228.
12. Kumar, S., Tamura, K., Jakobsen, I.-B. & Nei, M. (2001). MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17, 1244-1245.
13. Labeda, D. P. (1993). DNA relatedness among strains of the Streptomyces lavendulae phenotypic cluster group. Int J Syst Bacteriol 43, 822-825.
14. Labeda, D. P. (1998). DNA relatedness among the Streptomyces fulvissimus and Streptomyces griseoviridis phenotypic cluster groups. Int J Syst Bacteriol 48, 829-832.
15. Labeda, D. P. & Lyons, A. J. (1992). DNA relatedness among strains of the sweet potato pathogen Streptomyces ipomoea (Person and Martin 1940) Waksman and Henrici 1948. Appl Environ Microbiol 58, 532-535.
16. Lanoot, B., Vancanneyt, M., Cleenwerck, I., Wang, L., Li, W., Liu, Z. & Swings, J. (2002). The search for synonyms among streptomycetes by using SDS-PAGE of whole-cell proteins. Emendation of the species Streptomyces aurantiacus, Streptomyces cacaoi subsp. cacaoi, Streptomyces caeruleus and Streptomyces violaceus. Int J Syst Evol Microbiol 52, 823-829.
17. Lechevalier, M. P. & Lechevalier, H. A. (1970). Chemical composition as a criterion in the classification of aerobic actinomycetes. Int J Syst Bacteriol 20, 435-443.
18. Lechevalier, M. P., De Bièvre, C. & Lechevalier, H. A. (1977). Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochem Syst Ecol 5, 249-260.
19. Li, W., Lanoot, B., Zhang, Y., Vancanneyt, M., Swings, J. & Liu, Z. (2002). Streptomyces scopiformis sp. nov., a novel streptomycete with fastigiated spore chains. Int J Syst Evol Microbiol 52, 1629-1633.
20. Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Yadhukumar, Buchner, A., Lai, T., Steppi, S. & other authors (2004). ARB: a software environment for sequence data. Nucleic Acids Res 32, 1363-1371.
21. Manfio, G. P., Zakrzewska-Czerwinska, J., Atalan, E. & Goodfellow, M. (1995). Towards minimal standards for the description of Streptomyces species. Bioteknologia 7-8, 242-253.
22. Manfio, G. P., Atalan, E., Zakrzewska-Czerwinska, J., Mordarski, M., Rodriguez, C., Collins, M. D. & Goodfellow, M. (2003). Classification of novel soil streptomycetes as Streptomyces aureus sp. nov., Streptomyces laceyi sp. nov. and Streptomyces sanglieri sp. nov. Antonie van Leeuwenhoek 83, 245-255.
23. Minnikin, D. E., Patel, P. V., Alshamaony, L. & Goodfellow, M. (1977). Polar lipid composition in the classification of Streptomyces and related bacteria. Int J Syst Bacteriol 27, 104-117.
24. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
25. Sembiring, L., Ward, A. C. & Goodfellow, M. (2000). Selective isolation and characterization of members of the Streptomyces violaceusniger clade associated with roots of Paraserianthes falcataria. Antonie van Leeuwenhoek 78, 353-366.
26. Shirling, E. B. & Gottlieb, D. (1966). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313-340.
27. Stolz, A., Busse, H.-J. & Kämpfer, P. (2007). Pseudomonas knackmussii sp. nov. Int J Syst Evol Microbiol 57, 572-576.
28. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
29. Tindall, B. J. (1990a). A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. Syst Appl Microbiol 13, 128-130.
30. Tindall, B. J. (1990b). Lipid composition of Halobacterium lacusprofundi. FEMS Microbiol Lett 66, 199-202.
31. Waksman, S. A. & Henrici, A. T. (1943). The nomenclature and classification of the actinomycetes. J Bacteriol 46, 337-341.
32. Williams, S. T., Goodfellow, M., Alderson, G., Wellington, E. M. H., Sneath, P. H. A. & Sackin, M. J. (1983). Numerical classification of Streptomyces and related genera. J Gen Microbiol 129, 1742-1813.