Structure-function of the cytochrome b6f complex

Photochemistry and Photobiology

Volumn 84, Issue 6, 2008, Pages 1349-1358

  Baniulis, D ^a,b   Yamashita, E ^a,c   Zhang, H ^a,d   Hasan, S S ^a   Cramer, W A ^a  

^a PURDUE UNIVERSITY   (United States)

^b INSTITUTE OF AGRICULTURE   (Lithuania)

^c OSAKA UNIVERSITY   (Japan)

^d Aptuit Inc   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOCHROME B6F;

ANIMAL; CHEMISTRY; CONFERENCE PAPER; ELECTRON TRANSPORT; GENETICS; GENOME; LIPID METABOLISM; METABOLISM; PROTEIN CONFORMATION; PROTEIN MULTIMERIZATION;

ANIMALS; CYTOCHROME B6F COMPLEX; ELECTRON TRANSPORT; GENOME; LIPID METABOLISM; PROTEIN CONFORMATION; PROTEIN MULTIMERIZATION;

CHLAMYDOMONAS REINHARDTII; CHLOROPHYTA; CYANOBACTERIA; MASTIGOCLADUS LAMINOSUS;

EID: 55649090532     PISSN: 00318655     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1751-1097.2008.00444.x     Document Type: Conference Paper

References (90)

1. 6f complex. Annu. Rev. Biochem. 75, 769 790.
2. Allen, J. (2003) Cyclic, pseudocyclic and noncyclic photophosphorylation: New links in the chain. Trends Plant Sci. 8, 15 19.
3. Berry, E. A., M. Guergova-Kuras, L.-S. Huang A. R. Crofts (2000) Structure and function of cytochrome bc complexes. Annu. Rev. Biochem. 69, 1005 1075.
4. 1 complex: Function in the context of structure. Annu. Rev. Physiol. 66, 689 733.
5. 1 complex. J. Biol. Chem. 273, 21603 21607.
6. 1 complex: Reaction mechanism and prevention of short-circuiting. Biochim. Biophys. Acta 1709, 5 34.
7. Osyczka, A., C. C. Moser P. L. Dutton (2004) Reversible redox energy coupling in electron transfer chains. Nature 427, 607 612.
8. Rich, P. R. (2004) The quinone chemistry of bc complexes. Biochim. Biophys. Acta 1658, 165 171.
9. Sacksteder, C. A., A. Kanazawa, M. E. Jacoby D. M. Kramer (2000) The proton to electron stoichiometry of steady-state photosynthesis in living plants: A proton-pumping Q cycle is continuously engaged. Proc. Natl. Acad. Sci. USA 97, 14283 14288.
10. Trumpower, B. L. (1990) The protonmotive Q cycle. Energy transduction by coupling of proton translocation to electron transfer by the cytochrome bc1 complex. J. Biol. Chem. 265, 11409 11412.
11. 1 from the photosynthetic bacterium Rhodobacter sphaeroides. J. Biol. Chem. 283, 2846 2857.
12. Joliot, P. A. Joliot (2002) Cyclic electron transfer in plant leaf. Proc. Natl Acad. Sci. USA 99, 10209 10214.
13. Joliot, P. A. Joliot (2005) Quantification of cyclic and linear electron flows in plants. Proc. Natl Acad. Sci. USA 102, 4913 4918.
14. Joliot, P. A. Joliot (2006) Cyclic electron flow in C3 plants. Biochim. Biophys. Acta 1757, 362 368.
15. Tagawa, K., H. Y. Tsujimoto D. L. Arnon (1963) Role of chloroplast ferredoxin in the energy conversion process of photosynthesis. Biochemistry 49, 567 572.
16. n. J. Mol. Biol. 370, 39 52.
17. Bouges-Bocquet, B. (1978) Absorption changes from 437 nm to 530 nm in Chlorella pyrenoidosa under flash excitation. Probable detection of ferredoxin - NADP-reductase. FEBS Lett. 85, 340 344.
18. + reductase. Kinetics of electron transfer, transient intermediates, and catalytic activities studied by flash-absorption spectroscopy with isolated photosystem I and ferredoxin. J. Biol. Chem. 280, 25960 25972.
19. + oxidoreductase with the chloroplast cytochrome b-f complex. FEBS Lett. 174, 137 142.
20. 6f complex. J. Biol. Chem. 276, 38159 38165.
21. Shikanai, T. (2007) Cyclic electron transport around photosystem I: Genetic approaches. Annu. Rev. Plant Biol. 58, 199 217.
22. Bendall, D. S. R. S. Manasse (1995) Cyclic phosphorylation and electron transport. Biochim. Biophys. Acta 1229, 23 38.
23. Joliot, P. A. Joliot (1988) The low-potential electron-transfer chain in the cytochrome b/f complex. Biochim. Biophys. Acta 933, 319 333.
24. 6. J. Biol. Chem. 272, 32427 32435.
25. Lavergne, J. (1983) Membrane potential-dependent reduction of cytochrome b-6 in an algal mutant lacking photosystem I centers. Biochim. Biophys. Acta 725, 25 33.
26. 6f complex of oxygenic photosynthesis: Tuning the cavity. Science 302, 1009 1014.
27. 6f complex. Nature 426, 413 418.
28. 6f complex: Binding site and intraprotein transfer of the quinone analogue inhibitor 2,5-dibromo-3-methyl-6-isopropyl-p-benzoquinone. Proc. Natl Acad. Sci. USA 103, 67 74.
29. Zhang, H. W. A. Cramer (2005) Problems in obtaining diffraction-quality crystals of hetero-oligomeric integral membrane proteins. J. Struct. Funct. Genomics 6, 219 223.
30. 6f complex to structure changes in the hinge region of the Rieske iron-sulfur protein. J. Biol. Chem. 278, 20925 20933.
31. 6f complex. J. Mol. Biol. 344, 481 493.
32. 6f complex of Synechocystis sp. PCC 6803. J. Biol. Chem. 279, 39383 39388.
33. 6f complex of oxygenic photosynthesis. Proc. Natl Acad. Sci. USA 100, 5160 5163.
34. Bowie, J. U. (2001) Stabilizing membrane proteins. Curr. Opin. Struct. Biol. 11, 397 402.
35. Engel, C. K., L. Chen G. G. Prive (2002) Stability of the lactose permease in detergent solutions. Biochim. Biophys. Acta 1564, 47 56.
36. 6 complex of five polypeptides with plastoquinol-plastocyanin-oxidoreductase activity from spinach chloroplasts. Eur. J. Biochem. 117, 591 599.
37. 6f complex in oxygenic photosynthesis. Methods Mol. Biol. 274, 67 78.
38. Haines, T. H. N. A. Dencher (2002) Cardiolipin: A proton trap for oxidative phosphorylation. FEBS Lett. 528, 35 39.
39. Palsdottir, H. C. Hunte (2004) Lipids in membrane protein structures. Biochim. Biophys. Acta 1666, 2 18.
40. Shinzawa-Itoh, K., H. Aoyama, K. Muramoto, H. Terada, T. Kurauchi, Y. Tadehara, A. Yamasaki, T. Sugimura, S. Kurono, K. Tsujimoto, T. Mizushima, E. Yamashita, T. Tsukihara S. Yoshikawa (2007) Structures and physiological roles of 13 integral lipids of bovine heart cytochrome c oxidase. EMBO J. 26, 1713 1725.
41. 6f complex. Plant Cell 12, 137 150.
42. Schelin, J., F. Lindmark A. K. Clarke (2002) The clpP multigene family for the ATP-dependent Clp protease in the cyanobacterium Synechococcus. Microbiology 148, 2255 2265.
43. Kroh, H. E. L. D. Simon (1990) The ClpP component of Clp protease is the sigma 32-dependent heat shock protein F21.5. J. Bacteriol. 172, 6026 6034.
44. Osteras, M., A. Stotz, S. Schmid Nuoffer U. Jenal (1999) Identification and transcriptional control of the genes encoding the Caulobacter crescentus ClpXP protease. J. Bacteriol. 181, 3039 3050.
45. 6f complex: Position of the cytochrome b hemes in the membrane. Proc. Natl Acad. Sci. USA 81, 674 678.
46. 6f complex: EPR spectroscopy and correlation with structure. J. Amer. Chem. Soc. 128, 14246 14247.
47. 6f complex studied by EPR: A pair of strongly interacting hemes. Proc. Natl Acad. Sci. USA 104, 519 524.
48. 6f complex from spinach and the cyanobacterium, M. laminosus. Mol Cell Proteomics 1, 816 827.
49. Krishtalik, L. I. W. A. Cramer (1995) On the physical basis for the cis-positive rule describing protein orientation in biological membranes. FEBS Lett. 369, 140 143.
50. von Heijne, G. (1994) Membrane proteins: From sequence to structure. Annu. Rev. Biophys. Biomol. Struct. 23, 167 192.
51. Graan, T. D. R. Ort (1983) Initial events in the regulation of electron transfer in chloroplasts. J. Biol. Chem. 258, 2831 2836.
52. Mitchell, P. (1975) The protonmotive Q cycle: A general formulation. FEBS Lett. 59, 137 139.
53. Rich, P. J. (1986) A perspective on Q-cycles. J. Bioenerg. Biomembr. 18, 145 156.
54. 6in situ. Biochemistry 28, 8990 8998.
55. Girvin, M. E. W. A. Cramer (1984) A redox study of the electron transport pathway responsible for generation of the slow electrochromic phase in chloroplasts. Biochim. Biophys. Acta 767, 29 38.
56. 1 complex: Importance for the Q-cycle and superoxide production. Proc. Natl Acad. Sci. USA 104, 7887 7892.
57. 1 complex: A new gating mechanism that prevents short circuits. Biochim. Biophys. Acta 1757, 1019 1034.
58. 1 complex. Biochemistry 41, 7866 7874.
59. Mitchell, P. (1976) Possible molecular mechanisms of the protonmotive function of cytochrome systems. J. Theor. Biol. 62, 327 367.
60. 1 complex controls the rate of ubihydroquinone oxidation. Biochim. Biophys. Acta 1655, 77 92.
61. Crofts, A. R., S. W. Meinhardt, K. R. Jones M. Snozzi (1983) The role of the quinone pool in the cyclic electron-transfer chain of Rhodopseudomonas sphaeroides. A modified Q-cycle mechanism. Biochim. Biophys. Acta 723, 202 218.
62. 1 complex from the yeast Saccharomyces cerevisiae with an antibody Fv fragment. Structure Fold Des. 8, 669 684.
63. 1 complex: A new crystal structure reveals an altered intramolecular hydrogen-bonding pattern. J. Mol. Biol. 351, 573 597.
64. Cape, J. L., M. K. Bowman D. M. Kramer (2006) Understanding the cytochrome bc complexes by what they don't do. The Q-cycle at 30. Trends Plant Sci. 11, 46 55.
65. Kramer, D. M. A. R. Crofts (1992) A Q cycle type model for turnover of the bf complex under a wide range of redox conditions. In Research in Photosynthesis (Edited by N. Murata pp. 491 494. Kluwer Scientific Publishers, Dordrecht.
66. 1 complex from bovine heart mitochondria. Science 277, 60 66.
67. Gray, H. B. J. R. Winkler (2005) Long-range electron transfer. Proc. Natl Acad. Sci. USA 102, 3534 3539.
68. Page, C. C., C. C. Moser, X. Chen P. L. Dutton (1999) Natural engineering principles of electron tunnelling in biological oxidation-reduction. Nature 402, 47 52.
69. 1. Nature 392, 677 684.
70. 1: A new device for electron transfer in proteins. Trends Biochem. Sci. 26, 445 451.
71. 1 complex. Proc. Natl Acad. Sci. USA 103, 13045 13050.
72. Kutoh, E. N. Sone (1988) Quinol-cytochrome c oxidoreductase from the thermophile Bacterium PS3. J. Biol. Chem. 263, 9020 9026.
73. 6 and subunit IV. J. Biol. Chem. 270, 10612 10617.
74. 1 of quinol-cytochrome c reductase. J. Biol. Chem. 271, 12457 12462.
75. Yu, J., L. Hederstedt P. J. Piggot (1995) The cytochrome bc complex (menaquinone:cytochrome c reductase) in Bacillus subtilis has a nontraditional subunit organization. J. Bacteriol. 177, 6751 6760.
76. Yu, J. N. E. Le Brun (1998) Studies of the cytochrome subunits of the menaquinone:cytochrome c reductase (bc complex) of Bacillus subtilis. J. Biol. Chem. 273, 8860 8866.
77. 6f complex for its charge transfer pathways. Biochim. Biophys. Acta 1757, 339 345.
78. Schutz, M., M. Brugna, E. Lebrun, F. Baymann, R. Huber, K. O. Stetter, G. Hauska, R. Toci, D. Lemesle-Meunier, P. Tron, C. Schmidt W. Nitschke (2000) Early evolution of cytochrome bc complexes. J. Mol. Biol. 300, 663 675.
79. Kramer, D. M., B. Schoepp, U. Liebl W. Nitschke (1997) Cyclic electron transfer in Heliobacillus mobilis involving a menaquinol-oxidizing cytochrome bc complex and an RCI-type reaction center. Biochemistry 36, 4203 4211.
80. Laisk, A., H. Eichelmann, V. Oja, E. Talts R. Scheibe (2007) Rates and roles of cyclic and alternative electron flow in potato leaves. Plant Cell Physiol. 48, 1575 1588.
81. n and n-side electron and proton transfer reactions. In Photosynthetic Protein Complexes: A Structural Approach (Edited by P. Fromme pp. 155 179. Wiley-VCH, Weinheim.
82. 1 in complex with famoxadone: The role of aromatic-aromatic interaction in inhibition. Biochemistry 41, 11692 11702.
83. 6f complex: Unusual optical properties protect the complex against singlet oxygen. Biophys. J. 88, 4178 4187.
84. Kim, H., N. Dashdorj, H. Zhang, J. Yan, W. A. Cramer S. Savikhin (2005) An anomalous distance dependence of intra-protein chlorophyll-carotenoid triplet energy transfer. Biophys. J. 89, 28 30.
85. Kuhlbrandt, W. (2003) Structural biology: Dual approach to a light problem. Nature 426, 399 400.
86. 6f complex of oxygenic photosynthesis. Proteins, Nucleic Acids, and Enzymes 49, 1265 1273.
87. 6f complex. Biochemistry 47, 3654 3661.
88. Rawlings, N. D., F. R. Morton, C. Y. Kok, J. Kong A. J. Barrett (2008) MEROPS: The peptidase database. Nucleic Acids Res. 36, D320 325.
89. Rippka, R., J. Deruelles, J. B. Waterbury, M. Herdman R. Y. Stanier (1979) Generic assignments, strain histories and properties of pure cultures of cyanobacteria. J. Gen. Microbiol. 111, 1 61.
90. 6f complex. Proc. Natl Acad. Sci. USA 102, 15860 15865.