Gene expression profiling of liver from dairy cows treated intra-mammary with lipopolysaccharide

BMC Genomics

Volumn 9, Issue , 2008, Pages

  Jiang, Li ^a   Sørensen, Peter ^a   Røntved, Christine ^a   Vels, Lotte ^a   Ingvartsen, Klaus L ^a  

^a DANISH INSTITUTE OF AGRICULTURAL SCIENCES   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

CELL ADHESION MOLECULE; CHEMOKINE; COLLECTIN; COMPLEMENT; CYTOKINE; ESCHERICHIA COLI LIPOPOLYSACCHARIDE; HORMONE; TRANSCRIPTION FACTOR; ACUTE PHASE PROTEIN; LIPOPOLYSACCHARIDE;

ACUTE PHASE RESPONSE; ANIMAL EXPERIMENT; ANIMAL MODEL; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; DAIRY CATTLE; FEMALE; GENE CLUSTER; GENE EXPRESSION PROFILING; GENE FUNCTION; HYPOTHALAMUS HYPOPHYSIS ADRENAL SYSTEM; LIVER METABOLISM; LIVER PARENCHYMA; MASTITIS; NONHUMAN; NUCLEOTIDE SEQUENCE; SIGNAL TRANSDUCTION; TISSUE SPECIFICITY; ANIMAL; ANIMAL DISEASE; CATTLE; CATTLE DISEASE; DAIRYING; ENTEROBACTER INFECTION; GENETICS; IMMUNOLOGY; LIVER; METABOLISM; UDDER;

BOVINAE; ESCHERICHIA COLI; MAMMALIA;

ACUTE-PHASE PROTEINS; ACUTE-PHASE REACTION; ANIMALS; CATTLE; DAIRYING; ESCHERICHIA COLI INFECTIONS; FEMALE; GENE EXPRESSION PROFILING; LIPOPOLYSACCHARIDES; LIVER; MAMMARY GLANDS, ANIMAL; MASTITIS, BOVINE;

EID: 55249094815     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-9-443     Document Type: Article

References (65)

1. Burvenich C Bannerman DD Lippolis JD Peelman L Nonnecke BJ Kehrli ME Jr et al. Cumulative physiological events influence the inflammatory response of the bovine udder to Escherichia coli infections during the transition period J Dairy Sci 2007, 90(Suppl 1):E39-E54. 17517751
2. Ramadori G Christ B Cytokines and the hepatic acute-phase response Semin Liver Dis 1999, 19:141-155. 10422197
3. Yoo JY Desiderio S Innate and acquired immunity intersect in a global view of the acute-phase response Proc Natl Acad Sci USA 2003, 100:1157-1162. 298743 12540827 10.1073/pnas.0336385100
4. Eckersall PD Young FJ Nolan AM Knight CH McComb C Waterston MM et al. Acute phase proteins in bovine milk in an experimental model of Staphylococcus aureus subclinical mastitis J Dairy Sci 2006, 89:1488-1501. 16606719
5. Upragarin N Landman WJ Gaastra W Gruys E Extrahepatic production of acute phase serum amyloid A Histol Histopathol 2005, 20:1295-1307. 16136510
6. Waldron MR Nishida T Nonnecke BJ Overton TR Effect of lipopolysaccharide on indices of peripheral and hepatic metabolism in lactating cows J Dairy Sci 2003, 86:3447-3459. 14672174
7. Yoshioka M Ito T Miyazaki S Nakajima Y The release of tumor necrosis factor-alpha, interleukin-1, interleukin-6 and prostaglandin E2 in bovine Kupffer cells stimulated with bacterial lipopolysaccharide Vet Immunol Immunopathol 1998, 66:301-307. 10.1016/S0165-2427(98)00206-2 9880106
8. Yoshioka M Watanabe A Shimada N Murata H Yokomizo Y Nakajima Y Regulation of haptoglobin secretion by recombinant bovine cytokines in primary cultured bovine hepatocytes Domest Anim Endocrinol 2002, 23:425-433. 10.1016/S0739-7240(02)00174-1 12206875
9. Jensen LE Whitehead AS Regulation of serum amyloid A protein expression during the acute-phase response Biochem J 1998, 334(Pt 3):489-503. 1219714 9729453
10. Vels L Rontved C Bjerring M Ingvartsen KL Cytokine and Acute Phase Protein Gene Expression in Repeated Liver Biopsies of Dairy Cows with a Lipopolysaccharide-Incuded Mastitis J Dairy Sci 2008.
11. Bayne CJ Gerwick L The acute phase response and innate immunity of fish Dev Comp Immunol 2001, 25:725-743. 10.1016/S0145-305X(01)00033-7 11602193
12. Petersen HH Nielsen JP Heegaard PM Application of acute phase protein measurements in veterinary clinical chemistry Vet Res 2004, 35:163-187. 10.1051/vetres:2004002 15099494
13. Eckersall PD Young FJ McComb C Hogarth CJ Safi S Weber A et al. Acute phase proteins in serum and milk from dairy cows with clinical mastitis Vet Rec 2001, 148:35-41. 11202551
14. Cao H Kabaroff LC You Q Rodriguez A Boermans HJ Karrow NA Characterization of ovine hepatic gene expression profiles in response to Escherichia coli lipopolysaccharide using a bovine cDNA microarray BMC Vet Res 2006, 2:34. 1684251 17134499 10.1186/1746-6148-2-34
15. Kabaroff LC Rodriguez A Quinton M Boermans H Karrow NA Assessment of the ovine acute phase response and hepatic gene expression in response to Escherichia coli endotoxin Vet Immunol Immunopathol 2006, 113:113-124. 10.1016/j.vetimm.2006.04.003 16806492
16. Higgins MA Berridge BR Mills BJ Schultze AE Gao H Searfoss GH et al. Gene expression analysis of the acute phase response using a canine microarray Toxicol Sci 2003, 74:470-484. 10.1093/toxsci/kfg142 12773757
17. Heumann D Roger T Initial responses to endotoxins and Gram-negative bacteria Clin Chim Acta 2002, 323:59-72. 10.1016/S0009-8981(02)00180-8 12135807
18. Su GL Lipopolysaccharides in liver injury: Molecular mechanisms of Kupffer cell activation Am J Physiol Gastrointest Liver Physiol 2002, 283:G256-G265. 12121871
19. Ojaniemi M Liljeroos M Harju K Sormunen R Vuolteenaho R Hallman M TLR-2 is upregulated and mobilized to the hepatocyte plasma membrane in the space of Disse and to the Kupffer cells TLR-4 dependently during acute endotoxemia in mice Immunol Lett 2006, 102:158-168. 10.1016/ j.imlet.2005.08.009 16216339
20. Chen R Lim JH Jono H Gu XX Kim YS Basbaum CB et al. Nontypeable Haemophilus influenzae lipoprotein P6 induces MUC5AC mucin transcription via TLR2-TAK1-dependent p38 MAPK-AP1 and IKKbeta-IkappaBalpha-NF-kappaB signaling pathways Biochem Biophys Res Commun 2004, 324:1087-1094. 10.1016/j.bbrc.2004.09.157 15485666
21. Kuprash DV Udalova IA Turetskaya RL Rice NR Nedospasov SA Conserved kappa B element located downstream of the tumor necrosis factor alpha gene: Distinct NF-kappa B binding pattern and enhancer activity in LPS activated murine macrophages Oncogene 1995, 11:97-106. 7624137
22. Galien R Evans HF Garcia T Involvement of CCAAT/enhancer-binding protein and nuclear factor-kappa B binding sites in interleukin-6 promoter inhibition by estrogens Mol Endocrinol 1996, 10:713-722. 10.1210/ me.10.6.713 8776731
23. Burns K Clatworthy J Martin L Martinon F Plumpton C Maschera B et al. Tollip, a new component of the IL-1RI pathway, links IRAK to the IL-1 receptor Nat Cell Biol 2000, 2:346-351. 10.1038/35014038 10854325
24. Corbacho AM Valacchi G Kubala L Olano-Martin E Schock BC Kenny TP et al. Tissue-specific gene expression of prolactin receptor in the acute-phase response induced by lipopolysaccharides Am J Physiol Endocrinol Metab 2004, 287:E750-E757. 10.1152/ajpendo.00522.2003 15186999
25. Cataldo L Chen NY Yuan Q Li W Ramamoorthy P Wagner TE et al. Inhibition of oncogene STAT3 phosphorylation by a prolactin antagonist, hPRL-G129R, in T-47D human breast cancer cells Int J Oncol 2000, 17:1179-1185. 11078803
26. Akira S IL-6-regulated transcription factors Int J Biochem Cell Biol 1997, 29:1401-1418. 10.1016/S1357-2725(97)00063-0 9570135
27. Thompson BJ Shang CA Waters MJ Identification of genes induced by growth hormone in rat liver using cDNA arrays Endocrinology 2000, 141:4321-4324. 10.1210/en.141.11.4321 11089569
28. Vishnyakova TG Bocharov AV Baranova IN Chen Z Remaley AT Csako G et al. Binding and internalization of lipopolysaccharide by Cla-1, a human orthologue of rodent scavenger receptor B1 J Biol Chem 2003, 278:22771-22780. 10.1074/jbc.M211032200 12651854
29. Mietus-Snyder M Glass CK Pitas RE Transcriptional activation of scavenger receptor expression in human smooth muscle cells requires AP-1/ c-Jun and C/EBPbeta: Both AP-1 binding and JNK activation are induced by phorbol esters and oxidative stress Arterioscler Thromb Vasc Biol 1998, 18:1440-1449. 9743233
30. Gao B Cytokines, STATs and liver disease Cell Mol Immunol 2005, 2:92-100. 16191414
31. Romanovsky AA Almeida MC Aronoff DM Ivanov AI Konsman JP Steiner AA Fever and hypothermia in systemic inflammation: Recent discoveries and revisions Front Biosci 2005, 10:2193-2216. 10.2741/1690 15970487
32. Steiner AA Ivanov AI Serrats J Hosokawa H Phayre AN Robbins JR Cellular and molecular bases of the initiation of fever PLoS Biol 2006, 4:e284. 1551923 16933973 10.1371/journal.pbio.0040284
33. Hopkins SJ Central nervous system recognition of peripheral inflammation: A neural, hormonal collaboration Acta Biomed 2007, 78(Suppl 1):231-247. 17465337
34. Karrow NA Activation of the hypothalamic-pituitary-adrenal axis and autonomic nervous system during inflammation and altered programming of the neuroendocrine-immune axis during fetal and neonatal development: lessons learned from the model inflammagen, lipopolysaccharide Brain Behav Immun 2006, 20:144-158. 10.1016/j.bbi.2005.05.003 16023324
35. Kumsta R Entringer S Hellhammer DH Wust S Cortisol and ACTH responses to psychosocial stress are modulated by corticosteroid binding globulin levels Psychoneuroendocrinology 2007. 17904296
36. Emptoz-Bonneton A Crave JC LeJeune H Brebant C Pugeat M Corticosteroid-binding globulin synthesis regulation by cytokines and glucocorticoids in human hepatoblastoma-derived (HepG2) cells J Clin Endocrinol Metab 1997, 82:3758-3762. 10.1210/jc.82.11.3758 9360537
37. Burgess-Beusse BL Darlington GJ C/EBPalpha is critical for the neonatal acute-phase response to inflammation Mol Cell Biol 1998, 18:7269-7277. 109308 9819413
38. Ruminy P Gangneux C Claeyssens S Scotte M Daveau M Salier JP Gene transcription in hepatocytes during the acute phase of a systemic inflammation: From transcription factors to target genes Inflamm Res 2001, 50:383-390. 10.1007/PL00000260 11556518
39. Arai T Tabona P Summerfield JA Human mannose-binding protein gene is regulated by interleukins, dexamethasone and heat shock Q J Med 1993, 86:575-582. 8255972
40. Heine-Suner D az-Guillen MA de Villena FP Robledo M Benitez J Rodriguez de CS A high-resolution map of the regulator of the complement activation gene cluster on 1q32 that integrates new genes and markers Immunogenetics 1997, 45:422-427. 10.1007/s002510050224 9089100
41. Arenzana N Rodriguez de CS Promoter region of the human gene coding for beta-chain of C4b binding protein. Hepatocyte nuclear factor-3 and nuclear factor-I/CTF transcription factors are required for efficient expression of C4BPB in HepG2 cells J Immunol 1996, 156:168-175. 8598458
42. Leemans JC te Velde AA Florquin S Bennink RJ de BK van Lier RA et al. The epidermal growth factor-seven transmembrane (EGF-TM7) receptor CD97 is required for neutrophil migration and host defense J Immunol 2004, 172:1125-1131. 14707087
43. Wang T Ward Y Tian L Lake R Guedez L Stetler-Stevenson WG et al. CD97, an adhesion receptor on inflammatory cells, stimulates angiogenesis through binding integrin counterreceptors on endothelial cells Blood 2005, 105:2836-2844. 10.1182/blood-2004-07-2878 15576472
44. Gray JX Haino M Roth MJ Maguire JE Jensen PN Yarme A CD97 is a processed, seven-transmembrane, heterodimeric receptor associated with inflammation J Immunol 1996, 157:5438-5447. 8955192
45. Pixley FJ Stanley ER CSF-1 regulation of the wandering macrophage: complexity in action Trends Cell Biol 2004, 14:628-638. 10.1016/ j.tcb.2004.09.016 15519852
46. Hokeness-Antonelli KL Crane MJ Dragoi AM Chu WM Salazar-Mather TP IFN-alphabeta-mediated inflammatory responses and antiviral defense in liver is TLR9-independent but MyD88-dependent during murine cytomegalovirus infection J Immunol 2007, 179:6176-6183. 17947693
47. Hosokawa Y Hosokawa I Ozaki K Nakae H Matsuo T Increase of CCL20 expression by human gingival fibroblasts upon stimulation with cytokines and bacterial endotoxin Clin Exp Immunol 2005, 142:285-291. 1809524 16232215 10.1111/j.1365-2249.2005.02912.x
48. Ala A Dhillon AP Hodgson HJ Role of cell adhesion molecules in leukocyte recruitment in the liver and gut Int J Exp Pathol 2003, 84:1-16. 10.1046/ j.1365-2613.2003.00235.x 12694483
49. Erkel G Wisser G Anke T Influence of the fungal NF-kappaB inhibitor panepoxydone on inflammatory gene expression in MonoMac6 cells Int Immunopharmacol 2007, 7:612-624. 10.1016/j.intimp.2007.01.001 17386409
50. Kaibori M Yanagida H Nakanishi H Ozaki T Yoshida H Matsui K et al. Hepatocyte growth factor stimulates the induction of cytokine-induced neutrophil chemoattractant through the activation of NF-kappaB in rat hepatocytes J Surg Res 2006, 130:88-93. 10.1016/j.jss.2005.09.025 16271365
51. Viollet B Foretz M Guigas B Horman S Dentin R Bertrand L et al. Activation of AMP-activated protein kinase in the liver: A new strategy for the management of metabolic hepatic disorders J Physiol 2006, 574:41-53. 1817784 16644802 10.1113/jphysiol.2006.108506
52. Yoon JC Puigserver P Chen G Donovan J Wu Z Rhee J et al. Control of hepatic gluconeogenesis through the transcriptional coactivator PGC-1 Nature 2001, 413:131-138. 10.1038/35093050 11557972
53. Inoue H Ogawa W Ozaki M Haga S Matsumoto M Furukawa K et al. Role of STAT-3 in regulation of hepatic gluconeogenic genes and carbohydrate metabolism in vivo Nat Med 2004, 10:168-174. 10.1038/nm980 14716305
54. Loor JJ Everts RE Bionaz M Dann HM Morin DE Oliveira R et al. Nutrition-induced ketosis alters metabolic and signaling gene networks in liver of periparturient dairy cows Physiol Genomics 2007, 32:105-116. 10.1152/physiolgenomics.00188.2007 17925483
55. Waldron MR Kulick AE Bell AW Overton TR Acute experimental mastitis is not causal toward the development of energy-related metabolic disorders in early postpartum dairy cows J Dairy Sci 2006, 89:596-610. 16428629
56. Andersen JB Mashek DG Larsen T Nielsen MO Ingvartsen KL Effects of hyperinsulinaemia under euglycaemic condition on liver fat metabolism in dairy cows in early and mid-lactation J Vet Med A Physiol Pathol Clin Med 2002, 49:65-71. 11958469
57. Kristensen TN Sorensen P Kruhoffer M Pedersen KS Loeschcke V Genome-wide analysis on inbreeding effects on gene expression in Drosophila melanogaster Genetics 2005, 171:157-167. 1456508 15944359 10.1534/ genetics.104.039610
58. Durinck S Moreau Y Kasprzyk A Davis S De MB Brazma A et al. BioMart and Bioconductor: A powerful link between biological databases and microarray data analysis Bioinformatics 2005, 21:3439-3440. 10.1093/ bioinformatics/bti525 16082012
59. Irizarry RA Hobbs B Collin F Beazer-Barclay YD Antonellis KJ Scherf U et al. Exploration, normalization, and summaries of high density oligonucleotide array probe level data Biostatistics 2003, 4:249-264. 10.1093/biostatistics/4.2.249 12925520
60. Wu ZJ Irizarry RA Gentleman R Murillo FM Spencer F A Model Based Background Adjustment for Oligonucleotide Expression Arrays Johns Hopkins University, Dept. of Biostatistics Working Papers. Working Paper 1. 2003 http://www.bepress.com/jhubiostat/paper1
61. Workman C Jensen LJ Jarmer H Berka R Gautier L Nielser HB et al. A new non-linear normalization method for reducing variability in DNA microarray experiments Genome Biol 2002, 3. research0048 126873 12225587 10.1186/gb-2002-3-9-research0048
62. Wu Z Irizarry RA Preprocessing of oligonucleotide array data Nat Biotechnol 2004, 22:656-658. 10.1038/nbt0604-656b 15175677
63. Smyth GK Linear models and empirical bayes methods for assessing differential expression in microarray experiments Stat Appl Genet Mol Biol 2004, 3. Article 3
64. Smyth GK Limma: Linear models for microarray data Stat Appl Genet Mol Biol New York: Springer 2004, 3. Article 3 16646809
65. Milligan GW Cooper MC An examination of procedures for determining the number of clusters Psychometrika 1985, 50:159-179. 10.1007/BF02294245