SCOPUS 정보 검색 플랫폼

Physical Review Letters

Volumn 101, Issue 16, 2008, Pages

Effect of bending anisotropy on the 3D conformation of short DNA loops

(3) Norouzi, Davood a Mohammad Rafiee, Farshid a Golestanian, Ramin b

a INSTITUTE FOR ADVANCED STUDIES IN BASIC SCIENCES IASBS (Iran)

b UNIVERSITY OF SHEFFIELD (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ANISOTROPY; BENDING (DEFORMATION); DNA; GENES; ORGANIC ACIDS; THREE DIMENSIONAL;

BENDING; BENDING RIGIDITIES; DNA CONFORMATIONS; DNA INTERACTIONS; DNA LOOPS; ELASTIC MODELS; GEOMETRICAL FEATURES; INHOMOGENEITY; NONTRIVIAL;

NUCLEIC ACIDS;

EID: 55049104507 PISSN: 00319007 EISSN: 10797114 Source Type: Journal
DOI: 10.1103/PhysRevLett.101.168103 Document Type: Article

Times cited : (26)

References (43)

1
- 0003880161
- Garland, New York, 4th ed..
- B. Alberts, Molecular Biology of the Cell (Garland, New York, 2002), 4th ed..
- (2002) Molecular Biology of the Cell
- Alberts, B.¹

2
- 1842411320
- NATUAS 0028-0836 10.1038/38444
- K. Luger, Nature (London) 389, 251 (1997); NATUAS 0028-0836 10.1038/38444
- (1997) Nature (London) , vol.389 , pp. 251
- Luger, K.¹

3
- 0037992395
- NATUAS 0028-0836 10.1038/nature01595
- T.J. Richmond and C.A. Davey, Nature (London) 423, 145 (2003). NATUAS 0028-0836 10.1038/nature01595
- (2003) Nature (London) , vol.423 , pp. 145
- Richmond, T.J.¹ Davey, C.A.²

4
- 0032712359
- MMBRF7 1092-2172
- T.S. Baker, Microbiol. Mol. Biol. Rev. 63, 862 (1999). MMBRF7 1092-2172
- (1999) Microbiol. Mol. Biol. Rev. , vol.63 , pp. 862
- Baker, T.S.¹

5
- 2342640588
- ABBSE4 1056-8700 10.1146/annurev.biophys.33.110502.132711
- S.E. Halford, Annu. Rev. Biophys. Biomol. Struct. 33, 1 (2004); ABBSE4 1056-8700 10.1146/annurev.biophys.33.110502.132711
- (2004) Annu. Rev. Biophys. Biomol. Struct. , vol.33 , pp. 1
- Halford, S.E.¹

6
- 0026624977
- ARBOAW 0066-4154 10.1146/annurev.bi.61.070192.001215
- R. Schleif, Annu. Rev. Biochem. 61, 199 (1992); ARBOAW 0066-4154 10.1146/annurev.bi.61.070192.001215
- (1992) Annu. Rev. Biochem. , vol.61 , pp. 199
- Schleif, R.¹

7
- 0024811753
- ARVGB7 0066-4197 10.1146/annurev.ge.23.120189.001303
- S. Adhya, Annu. Rev. Genet. 23, 227 (1989); ARVGB7 0066-4197 10.1146/annurev.ge.23.120189.001303
- (1989) Annu. Rev. Genet. , vol.23 , pp. 227
- Adhya, S.¹

8
- 33847164986
- BIPMAA 0006-3525 10.1002/bip.20627
- H.G. Garcia, Biopolymers 85, 115 (2007). BIPMAA 0006-3525 10.1002/bip.20627
- (2007) Biopolymers , vol.85 , pp. 115
- Garcia, H.G.¹

9
- 33645816459
- BIOJAU 0006-3495 10.1529/biophysj.105.078162
- T. Hu, Biophys. J. 90, 2731 (2006). BIOJAU 0006-3495 10.1529/biophysj. 105.078162
- (2006) Biophys. J. , vol.90 , pp. 2731
- Hu, T.¹

10
- 0003896404
- Elsevier Academic Press, Boston
- C.R. Calladine, Understanding DNA, The Molecule & How it Works (Elsevier Academic Press, Boston, 2004).
- (2004) Understanding DNA, the Molecule & How It Works
- Calladine, C.R.¹

11
- 0001191247
- PNASA6 0027-8424 10.1073/pnas.78.8.4833
- D. Shore, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 78, 4833 (1981). 10.1073/pnas.78.8.4833
- (1981) Proc. Natl. Acad. Sci. U.S.A. , vol.78 , pp. 4833
- Shore, D.¹

12
- 2342518189
- MOCEFL 1097-2765 10.1016/S1097-2765(04)00210-2
- T.E. Cloutier and J. Widom, Mol. Cell 14, 355 (2004); MOCEFL 1097-2765 10.1016/S1097-2765(04)00210-2
- (2004) Mol. Cell , vol.14 , pp. 355
- Cloutier, T.E.¹ Widom, J.²

13
- 14844342574
- PNASA6 0027-8424 10.1073/pnas.0409059102
- T.E. Cloutier J. Widom Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 102, 3645 (2005). 10.1073/pnas.0409059102
- (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 3645
- Cloutier, T.E.¹ Widom, J.²

14
- 17244362931
- PNASA6 0027-8424 10.1073/pnas.0500983102
- Q. Du, Proc. Natl. Acad. Sci. U.S.A. PNASA6 0027-8424 102, 5397 (2005). 10.1073/pnas.0500983102
- (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 5397
- Du, Q.¹

15
- 40749090377
- PRLTAO 0031-9007 10.1103/PhysRevLett.100.018102
- C. Yuan, Phys. Rev. Lett. 100, 018102 (2008). PRLTAO 0031-9007 10.1103/PhysRevLett.100.018102
- (2008) Phys. Rev. Lett. , vol.100 , pp. 018102
- Yuan, C.¹

16
- 0000545475
- MAMOBX 0024-9297 10.1021/ma00134a028
- J. Shimada and H. Yamakawa, Macromolecules 17, 689 (1984). MAMOBX 0024-9297 10.1021/ma00134a028
- (1984) Macromolecules , vol.17 , pp. 689
- Shimada, J.¹ Yamakawa, H.²

17
- 0037215722
- BIOJAU 0006-3495
- Y. Zhang and D.M. Crothers, Biophys. J. 84, 136 (2003). BIOJAU 0006-3495
- (2003) Biophys. J. , vol.84 , pp. 136
- Zhang, Y.¹ Crothers, D.M.²

18
- 19544379865
- PRLTAO 0031-9007 10.1103/PhysRevLett.93.108108
- J. Yan and J.F. Marko, Phys. Rev. Lett. 93, 108108 (2004). PRLTAO 0031-9007 10.1103/PhysRevLett.93.108108
- (2004) Phys. Rev. Lett. , vol.93 , pp. 108108
- Yan, J.¹ Marko, J.F.²

19
- 18244404581
- PRLTAO 0031-9007 10.1103/PhysRevLett.94.138102
- P. Ranjith, Phys. Rev. Lett. 94, 138102 (2005). PRLTAO 0031-9007 10.1103/PhysRevLett.94.138102
- (2005) Phys. Rev. Lett. , vol.94 , pp. 138102
- Ranjith, P.¹

20
- 41349084347
- PLEEE8 1063-651X 10.1103/PhysRevE.71.021909
- P.A. Wiggins, Phys. Rev. E 71, 021909 (2005). PLEEE8 1063-651X 10.1103/PhysRevE.71.021909
- (2005) Phys. Rev. e , vol.71 , pp. 021909
- Wiggins, P.A.¹

21
- 28844474555
- PLEEE8 1063-651X 10.1103/PhysRevE.72.061902
- N. Douarche and S. Cocco, Phys. Rev. E 72, 061902 (2005). PLEEE8 1063-651X 10.1103/PhysRevE.72.061902
- (2005) Phys. Rev. e , vol.72 , pp. 061902
- Douarche, N.¹ Cocco, S.²

22
- 33644791019
- PLEEE8 1063-651X 10.1103/PhysRevE.73.031906
- P.A. Wiggins and P.C. Nelson, Phys. Rev. E 73, 031906 (2006). PLEEE8 1063-651X 10.1103/PhysRevE.73.031906
- (2006) Phys. Rev. e , vol.73 , pp. 031906
- Wiggins, P.A.¹ Nelson, P.C.²

23
- 33644891042
- EULEEJ 0295-5075 10.1209/epl/i2005-10447-9
- A.J. Spakowitz, Europhys. Lett. 73, 684 (2006). EULEEJ 0295-5075 10.1209/epl/i2005-10447-9
- (2006) Europhys. Lett. , vol.73 , pp. 684
- Spakowitz, A.J.¹

24
- 34547659294
- PLEEE8 1063-651X 10.1103/PhysRevE.76.021901
- Y.O. Popov and A.V. Tkachenko, Phys. Rev. E 76, 021901 (2007). PLEEE8 1063-651X 10.1103/PhysRevE.76.021901
- (2007) Phys. Rev. e , vol.76 , pp. 021901
- Popov, Y.O.¹ Tkachenko, A.V.²

25
- 36048965173
- PRLTAO 0031-9007 10.1103/PhysRevLett.99.198102
- K. Alim and E. Frey, Phys. Rev. Lett. 99, 198102 (2007); PRLTAO 0031-9007 10.1103/PhysRevLett.99.198102
- (2007) Phys. Rev. Lett. , vol.99 , pp. 198102
- Alim, K.¹ Frey, E.²

26
- 36749071631
- EPJSFH 1292-8941 10.1140/epje/i2007-10228-x
- K. Alim E. Frey Eur. Phys. J. E 24, 185 (2007). EPJSFH 1292-8941 10.1140/epje/i2007-10228-x
- (2007) Eur. Phys. J. e , vol.24 , pp. 185
- Alim, K.¹ Frey, E.²

27
- 33749259954
- STRUE6 0969-2126 10.1016/j.str.2006.08.004
- F. Lankas, Structure 14, 1527 (2006). STRUE6 0969-2126 10.1016/j.str.2006.08.004
- (2006) Structure , vol.14 , pp. 1527
- Lankas, F.¹

28
- 38349173106
- NARHAD 0305-1048 10.1093/nar/gkm891
- S.A. Harris, Nucleic Acids Res. NARHAD 0305-1048 36, 21 (2007). 10.1093/nar/gkm891
- (2007) Nucleic Acids Res. , vol.36 , pp. 21
- Harris, S.A.¹

29
- 45249118115
- PRLTAO 0031-9007 10.1103/PhysRevLett.100.238103
- T.B. Liverpool, Phys. Rev. Lett. 100, 238103 (2008). PRLTAO 0031-9007 10.1103/PhysRevLett.100.238103
- (2008) Phys. Rev. Lett. , vol.100 , pp. 238103
- Liverpool, T.B.¹

30
- 17944383822
- PRLTAO 0031-9007 10.1103/PhysRevLett.83.4900
- A. Balaeff, Phys. Rev. Lett. 83, 4900 (1999). PRLTAO 0031-9007 10.1103/PhysRevLett.83.4900
- (1999) Phys. Rev. Lett. , vol.83 , pp. 4900
- Balaeff, A.¹

31
- 1542375817
- EPJSFH 1292-8941 10.1140/epje/e2004-00032-5
- F. Mohammad-Rafiee and R. Golestanian, Eur. Phys. J. E 12, 599 (2003); EPJSFH 1292-8941 10.1140/epje/e2004-00032-5
- (2003) Eur. Phys. J. e , vol.12 , pp. 599
- Mohammad-Rafiee, F.¹ Golestanian, R.²

32
- 17044389332
- JCOMEL 0953-8984 10.1088/0953-8984/17/14/004
- F. Mohammad-Rafiee R. Golestanian J. Phys. Condens. Matter 17, S1165 (2005). JCOMEL 0953-8984 10.1088/0953-8984/17/14/004
- (2005) J. Phys. Condens. Matter , vol.17 , pp. 1165
- Mohammad-Rafiee, F.¹ Golestanian, R.²

33
- 27744464295
- PRLTAO 0031-9007 10.1103/PhysRevLett.94.238102
- F. Mohammad-Rafiee and R. Golestanian, Phys. Rev. Lett. 94, 238102 (2005). PRLTAO 0031-9007 10.1103/PhysRevLett.94.238102
- (2005) Phys. Rev. Lett. , vol.94 , pp. 238102
- Mohammad-Rafiee, F.¹ Golestanian, R.²

34
- 0028375446
- MAMOBX 0024-9297 10.1021/ma00082a015
- J.F. Marko and E.D. Siggia, Macromolecules 27, 981 (1994); MAMOBX 0024-9297 10.1021/ma00082a015
- (1994) Macromolecules , vol.27 , pp. 981
- Marko, J.F.¹ Siggia, E.D.²

35
- 1542382023
- MAMOBX 0024-9297 10.1021/ma9520104
- J.F. Marko E.D. Siggia Macromolecules 29, 4820(E) (1996). MAMOBX 0024-9297 10.1021/ma9520104
- (1996) Macromolecules , vol.29
- Marko, J.F.¹ Siggia, E.D.²

36
- 0033487678
- PLEEE8 1063-651X 10.1103/PhysRevE.60.7239
- B. Fain and J. Rudnick, Phys. Rev. E 60, 7239 (1999); PLEEE8 1063-651X 10.1103/PhysRevE.60.7239
- (1999) Phys. Rev. e , vol.60 , pp. 7239
- Fain, B.¹ Rudnick, J.²

37
- 0036822243
- RMPHAT 0034-6861 10.1103/RevModPhys.74.953
- R.D. Kamien, Rev. Mod. Phys. 74, 953 (2002). RMPHAT 0034-6861 10.1103/RevModPhys.74.953
- (2002) Rev. Mod. Phys. , vol.74 , pp. 953
- Kamien, R.D.¹

38
- 0242290881
- BIOJAU 0006-3495
- F. Lankas, Biophys. J. 85, 2872 (2003). BIOJAU 0006-3495
- (2003) Biophys. J. , vol.85 , pp. 2872
- Lankas, F.¹

39
- 0004056428
- Butterworth-Heinemann, Oxford
- L.D. Landau and E.M. Lifshitz, Statistical Physics (Butterworth- Heinemann, Oxford, 1980), Pt..
- (1980) Statistical Physics
- Landau, L.D.¹ Lifshitz, E.M.²

40
- 0034625311
- JMOBAK 0022-2836 10.1006/jmbi.2000.3781
- F. Lankas, J. Mol. Biol. 299, 695 (2000); JMOBAK 0022-2836 10.1006/jmbi.2000.3781
- (2000) J. Mol. Biol. , vol.299 , pp. 695
- Lankas, F.¹

41
- 19744364369
- PRLTAO 0031-9007 10.1103/PhysRevLett.93.198107
- S. Neukirch, Phys. Rev. Lett. 93, 198107 (2004); PRLTAO 0031-9007 10.1103/PhysRevLett.93.198107
- (2004) Phys. Rev. Lett. , vol.93 , pp. 198107
- Neukirch, S.¹

42
- 12344299429
- EULEEJ 0295-5075 10.1209/epl/i2004-10306-3
- V. Rossetto, Europhys. Lett. 69, 142 (2005). EULEEJ 0295-5075 10.1209/epl/i2004-10306-3
- (2005) Europhys. Lett. , vol.69 , pp. 142
- Rossetto, V.¹

43
- 0000751914
- AJMAAN 0002-9327 10.2307/2373348
- J.H. White, Am. J. Math. 91, 693 (1969). AJMAAN 0002-9327 10.2307/2373348
- (1969) Am. J. Math. , vol.91 , pp. 693
- White, J.H.¹

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.