Elastic correlations in nucleosomal DNA structure

Physical Review Letters

Volumn 94, Issue 23, 2005, Pages

  Mohammad Rafiee, Farshid ^a   Golestanian, Ramin ^b  

^a ISAAC NEWTON INSTITUTE FOR MATHEMATICAL SCIENCES   (United Kingdom)

^b INSTITUTE FOR ADVANCED STUDIES IN BASIC SCIENCES IASBS   (Iran)

Author keywords

[No Author keywords available]

Indexed keywords

BENDING ENERGETICS; NUCLEOSOME CORE;

ANISOTROPY; CORRELATION METHODS; PHOSPHATES;

DNA;

DNA; NUCLEOSOME;

CHEMICAL MODEL; CHEMISTRY; COMPUTER SIMULATION; CONFORMATION; ELASTICITY; FOURIER ANALYSIS; NUCLEOSOME;

COMPUTER SIMULATION; DNA; ELASTICITY; FOURIER ANALYSIS; MODELS, CHEMICAL; NUCLEIC ACID CONFORMATION; NUCLEOSOMES;

EID: 27744464295     PISSN: 00319007     EISSN: 10797114     Source Type: Journal    
DOI: 10.1103/PhysRevLett.94.238102     Document Type: Article

References (29)

1. B. Alberts, Molecular Biology of the Cell (Garland, New York, 2002).
2. K. Luger, A.W. Mäder, R.K. Richmond, D.F. Sargent, and T.J. Richmond, Nature (London) NATUAS 0028-0836 389, 251 (1997). 10.1038/38444
3. R.M. Saecker and M.T. Record, Curr. Opin. Struct. Biol. 12, 311 (2002). COSBEF 0959-440X 10.1016/S0959-440X(02)00326-3
4. T.J. Richmond and C.A. Davey, Nature (London) NATUAS 0028-0836 423, 145 (2003). 10.1038/nature01595
5. C.J. Benham, Biopolymers 22, 2477 (1983). BIPMAA 0006-3525 10.1002/bip.360221112
6. F. Tanaka and H. Takahashi, J. Chem. Phys. 83, 6017 (1985). JCPSA6 0021-9606 10.1063/1.449637
7. J.F. Marko and E.D. Siggia, Macromolecules 27, 981 (1994); MAMOBX 0024-9297 10.1021/ma00082a015
8. J.F. Marko E.D. Siggia Macromolecules 29, 4820(E) (1996). MAMOBX 0024-9297 10.1021/ma9520104
9. R.D. Kamien, T.C. Lubensky, P. Nelson, and C.S. O'Hern, Europhys. Lett. 38, 237 (1997). EULEEJ 0295-5075 10.1209/epl/i1997-00231-y
10. B. Fain, J. Rudnick, and S. Östlund, Phys. Rev. E 55, 7364 (1997); PLEEE8 1063-651X 10.1103/PhysRevE.55.7364
11. B. Fain and J. Rudnick, Phys. Rev. E 60, 7239 (1999). PLEEE8 1063-651X 10.1103/PhysRevE.60.7239
12. J.F. Marko and E.D. Siggia, Phys. Rev. E 52, 2912 (1995). PLEEE8 1063-651X 10.1103/PhysRevE.52.2912
13. C. Bouchiat and M. Mézard, Phys. Rev. Lett. 80, 1556 (1998). PRLTAO 0031-9007 10.1103/PhysRevLett.80.1556
14. S. Panyukov and Y. Rabin, Phys. Rev. Lett. 85, 2404 (2000); PRLTAO 0031-9007 10.1103/PhysRevLett.85.2404
15. S. Panyukov Y. Rabin Europhys. Lett. 57, 512 (2002); EULEEJ 0295-5075 10.1209/epl/i2002-00491-5
16. A. De Col and T.B. Liverpool, Phys. Rev. E 69, 061907 (2004). PLEEE8 1063-651X 10.1103/PhysRevE.69.061907
17. T. Schlick and W.K. Olson, Science SCIEAS 0036-8075 257, 1110 (1992).
18. W.K. Olson, Curr. Opin. Struct. Biol. 6, 242 (1996). COSBEF 0959-440X 10.1016/S0959-440X(96)80082-0
19. C.S. O'Hern, R.D. Kamien, T.C. Lubensky, and P. Nelson, Eur. J. Phys. B 1, 95 (1998).
20. B. Mergell, M.R. Ejtehadi, and R. Everaers, Phys. Rev. E 68, 021911 (2003). PLEEE8 1063-651X 10.1103/PhysRevE.68.021911
21. F. Mohammad-Rafiee and R. Golestanian, Eur. Phys. J. E EPJSFH 1292-8941 12, 599 (2003); 10.1140/epje/e2004-00032-5
22. F. Mohammad-Rafiee R. Golestanian J. Phys. Condens. Matter JCOMEL 0953-8984 17, S1165 (2005). 10.1088/0953-8984/17/14/004
23. W.K. Olson, N.L. Marky, R.L. Jernigan, and V.B. Zhurkin, J. Mol. Biol. 232, 530 (1993). JMOBAK 0022-2836 10.1006/jmbi.1993.1409
24. M.D. Wang, H. Yin, R. Landick, J. Gelles, and S.M. Block, Biophys. J. 72, 1335 (1997). BIOJAU 0006-3495
25. A.V. Vologodskii, S.D. Levene, K.V. Klenin, M. Frank-Kamenetskii, and N.R. Cozzarelli, J. Mol. Biol. 227, 1224 (1992). JMOBAK 0022-2836 10.1016/0022-2836(92)90533-P
26. J.F. Marko, Europhys. Lett. 38, 183 (1997). EULEEJ 0295-5075 10.1209/epl/i1997-00223-5
27. H. Schiessel, J. Phys. Condens. Matter 15, R699 (2003). JCOMEL 0953-8984 10.1088/0953-8984/15/19/203
28. R.E. Dickerson, EMBO J. 8, 1 (1989). EMJODG 0261-4189
29. F. Mohammad-Rafiee and R. Golestanian (to be published).