메뉴 건너뛰기




Volumn 74, Issue 19, 2008, Pages 6068-6076

RNA arbitrarily primed PCR and fourier transform infrared spectroscopy reveal plasticity in the acid tolerance response of Streptococcus macedonicus

Author keywords

[No Author keywords available]

Indexed keywords

ABS RESINS; ACIDS; BIOPOLYMERS; CELL MEMBRANES; CELLS; CHEMICAL ANALYSIS; CHROMATOGRAPHIC ANALYSIS; COSMIC RAYS; CYTOLOGY; ELASTICITY; FATTY ACIDS; FOURIER TRANSFORM INFRARED SPECTROSCOPY; FOURIER TRANSFORMS; GENE EXPRESSION; GLYCEROL; NUCLEIC ACIDS; PLASTICITY; PLASTICS; POLYSACCHARIDES; PRINCIPAL COMPONENT ANALYSIS; PROGRAMMING THEORY; PROTEINS; RNA; SPECTROSCOPIC ANALYSIS; SPECTRUM ANALYSIS; THEOREM PROVING;

EID: 54449097775     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.00315-08     Document Type: Article
Times cited : (19)

References (43)
  • 1
    • 0034630080 scopus 로고    scopus 로고
    • Changes in acid tolerance of Lactococcus lactis during growth at constant pH
    • Alemayehu, D., E. O'Sullivan, and S. Condon. 2000. Changes in acid tolerance of Lactococcus lactis during growth at constant pH. Int. J. Food Microbiol. 55:215-221.
    • (2000) Int. J. Food Microbiol , vol.55 , pp. 215-221
    • Alemayehu, D.1    O'Sullivan, E.2    Condon, S.3
  • 2
    • 0037104993 scopus 로고    scopus 로고
    • Stress and the single cell: Intrapopulation diversity is a mechanism to ensure survival upon exposure to stress
    • Booth, I. R. 2002. Stress and the single cell: intrapopulation diversity is a mechanism to ensure survival upon exposure to stress. Int. J. Food Microbiol. 78:19-30.
    • (2002) Int. J. Food Microbiol , vol.78 , pp. 19-30
    • Booth, I.R.1
  • 4
    • 1642345402 scopus 로고    scopus 로고
    • Differential expression of Desulfovibrio vulgaris genes in response to Cu(II) and Hg(II) toxicity
    • Chang, I. S., J. L. Groh, M. M. Ramsey, J. D. Ballard, and L. R. Krumholz. 2004. Differential expression of Desulfovibrio vulgaris genes in response to Cu(II) and Hg(II) toxicity. Appl. Environ. Microbiol. 70:1847-1851.
    • (2004) Appl. Environ. Microbiol , vol.70 , pp. 1847-1851
    • Chang, I.S.1    Groh, J.L.2    Ramsey, M.M.3    Ballard, J.D.4    Krumholz, L.R.5
  • 5
    • 42449133874 scopus 로고    scopus 로고
    • The application of differential display as a gene profiling tool
    • Chang, K. C., B. Komm, N. B. Arnold, and M. Korc. 2007. The application of differential display as a gene profiling tool. Methods Mol. Biol. 383:31-40.
    • (2007) Methods Mol. Biol , vol.383 , pp. 31-40
    • Chang, K.C.1    Komm, B.2    Arnold, N.B.3    Korc, M.4
  • 6
    • 0035077507 scopus 로고    scopus 로고
    • Identification of stress-responsive genes in Streptococcus mutans by differential display reverse transcription-PCR
    • Chia, J.-S., Y.-Y. Lee, P.-T. Huang, and J.-Y. Chen. 2001. Identification of stress-responsive genes in Streptococcus mutans by differential display reverse transcription-PCR. Infect. Immun. 69:2493-2501.
    • (2001) Infect. Immun , vol.69 , pp. 2493-2501
    • Chia, J.-S.1    Lee, Y.-Y.2    Huang, P.-T.3    Chen, J.-Y.4
  • 7
    • 0141482106 scopus 로고    scopus 로고
    • Genetic and biochemical characterization of the phosphoenolpyruvate:glucose/ mannose phosphotransferase system of Streptococcus thermophilus
    • Cochu, A., C. Vadeboncoeur, S. Moineau, and M. Frenette. 2003. Genetic and biochemical characterization of the phosphoenolpyruvate:glucose/ mannose phosphotransferase system of Streptococcus thermophilus. Appl. Environ. Microbiol. 69:5423-5432.
    • (2003) Appl. Environ. Microbiol , vol.69 , pp. 5423-5432
    • Cochu, A.1    Vadeboncoeur, C.2    Moineau, S.3    Frenette, M.4
  • 8
    • 0035868453 scopus 로고    scopus 로고
    • Identification of conditionally expressed genes in Streptococcus pyogenes using RNA fingerprinting
    • Collin, M., and A. Olsen. 2001. Identification of conditionally expressed genes in Streptococcus pyogenes using RNA fingerprinting. FEMS Microbiol. Lett. 196:123-127.
    • (2001) FEMS Microbiol. Lett , vol.196 , pp. 123-127
    • Collin, M.1    Olsen, A.2
  • 9
    • 0141789637 scopus 로고    scopus 로고
    • Surviving the acid test: Responses of gram-positive bacteria to low pH
    • Cotter, P. D., and C. Hill. 2003. Surviving the acid test: responses of gram-positive bacteria to low pH. Microbiol. Mol. Biol. Rev. 67:429-453.
    • (2003) Microbiol. Mol. Biol. Rev , vol.67 , pp. 429-453
    • Cotter, P.D.1    Hill, C.2
  • 10
    • 4644230584 scopus 로고    scopus 로고
    • Microarrays and gene expression profiling in microbiology and infectious diseases: A clinician's perspective
    • Domachowske, B. J. 2004. Microarrays and gene expression profiling in microbiology and infectious diseases: a clinician's perspective. Clin. Microbiol. Newsl. 26:155-159.
    • (2004) Clin. Microbiol. Newsl , vol.26 , pp. 155-159
    • Domachowske, B.J.1
  • 11
    • 1642586925 scopus 로고    scopus 로고
    • Structural changes in the cells of some bacteria during population growth: A Fourier transform infrared-attenuated total reflectance study
    • Ede, S. M., L. M. Hafner, and P. M. Fredericks. 2004. Structural changes in the cells of some bacteria during population growth: a Fourier transform infrared-attenuated total reflectance study. Appl. Spectrosc. 58:317-322.
    • (2004) Appl. Spectrosc , vol.58 , pp. 317-322
    • Ede, S.M.1    Hafner, L.M.2    Fredericks, P.M.3
  • 13
    • 0036041922 scopus 로고    scopus 로고
    • Dynamic response of catabolic pathways to autoacidification in Lactococcus lactis: Transcript profiling and stability in relation to metabolic and energetic constraints
    • Even, S., N. D. Lindley, P. Loubiere, and M. Cocaign-Bousquet. 2002. Dynamic response of catabolic pathways to autoacidification in Lactococcus lactis: transcript profiling and stability in relation to metabolic and energetic constraints. Mol. Microbiol. 45:1143-1152.
    • (2002) Mol. Microbiol , vol.45 , pp. 1143-1152
    • Even, S.1    Lindley, N.D.2    Loubiere, P.3    Cocaign-Bousquet, M.4
  • 14
    • 3042653401 scopus 로고    scopus 로고
    • Fozo, E. M., and R. G. Quivey, Jr. 2004. The fabM gene product of Streptococcus mutans is responsible for the synthesis of monounsaturated fatty acids and is necessary for survival at low pH. J. Bacteriol. 186:4152-4158.
    • Fozo, E. M., and R. G. Quivey, Jr. 2004. The fabM gene product of Streptococcus mutans is responsible for the synthesis of monounsaturated fatty acids and is necessary for survival at low pH. J. Bacteriol. 186:4152-4158.
  • 15
    • 2342486606 scopus 로고    scopus 로고
    • Fozo, E. M., and R. G. Quivey, Jr. 2004. Shifts in the membrane fatty acid profile of Streptococcus mutans enhance survival in acidic environments. Appl. Environ. Microbiol. 70:929-936.
    • Fozo, E. M., and R. G. Quivey, Jr. 2004. Shifts in the membrane fatty acid profile of Streptococcus mutans enhance survival in acidic environments. Appl. Environ. Microbiol. 70:929-936.
  • 16
    • 0141646554 scopus 로고    scopus 로고
    • Identification of proteins induced at low pH in Lactococcus lactis
    • Frees, D., F. K. Vogensen, and H. Ingmer. 2003. Identification of proteins induced at low pH in Lactococcus lactis. Int. J. Food Microbiol. 87:293-300.
    • (2003) Int. J. Food Microbiol , vol.87 , pp. 293-300
    • Frees, D.1    Vogensen, F.K.2    Ingmer, H.3
  • 17
    • 2942623607 scopus 로고    scopus 로고
    • Identification of differential gene expression in bacteria associated with coral black band disease by using RNA-arbitrarily primed PCR
    • Frias-Lopez, J., G. T. Bonheyo, and B. W. Fouke. 2004. Identification of differential gene expression in bacteria associated with coral black band disease by using RNA-arbitrarily primed PCR. Appl. Environ. Microbiol. 70:3687-3694.
    • (2004) Appl. Environ. Microbiol , vol.70 , pp. 3687-3694
    • Frias-Lopez, J.1    Bonheyo, G.T.2    Fouke, B.W.3
  • 18
    • 0031781727 scopus 로고    scopus 로고
    • Rapid identification of urinary tract infection bacteria using hyperspectral whole-organism fingerprinting and artificial neural networks
    • Goodacre, R., E. M. Timmins, R. Burton, N. Kaderbhai, A. M. Woodward, D. B. Kell, and P. J. Rooney. 1998. Rapid identification of urinary tract infection bacteria using hyperspectral whole-organism fingerprinting and artificial neural networks. Microbiology 144:1157-1170.
    • (1998) Microbiology , vol.144 , pp. 1157-1170
    • Goodacre, R.1    Timmins, E.M.2    Burton, R.3    Kaderbhai, N.4    Woodward, A.M.5    Kell, D.B.6    Rooney, P.J.7
  • 19
    • 0034810491 scopus 로고    scopus 로고
    • uvrA is an acid-inducible gene involved in the adaptive response to low pH in Streptococcus mutans
    • Hanna, M. N., R. J. Ferguson, Y.-H. Li, and D. G. Cvitkovitch. 2001. uvrA is an acid-inducible gene involved in the adaptive response to low pH in Streptococcus mutans. J. Bacteriol. 183:5964-5973.
    • (2001) J. Bacteriol , vol.183 , pp. 5964-5973
    • Hanna, M.N.1    Ferguson, R.J.2    Li, Y.-H.3    Cvitkovitch, D.G.4
  • 21
    • 0030811569 scopus 로고    scopus 로고
    • Transcriptional analysis of the Streptococcus mutans hrcA, grpE and dnaK genes and regulation of expression in response to heat shock and environmental acidification
    • Jayaraman, G. C., J. E. Penders, and R. A. Burne. 1997. Transcriptional analysis of the Streptococcus mutans hrcA, grpE and dnaK genes and regulation of expression in response to heat shock and environmental acidification. Mol. Microbiol. 25:329-341.
    • (1997) Mol. Microbiol , vol.25 , pp. 329-341
    • Jayaraman, G.C.1    Penders, J.E.2    Burne, R.A.3
  • 22
    • 0032825378 scopus 로고    scopus 로고
    • Identification of the pH-inducible, proton-translocating F1F0-ATPase (atpBEFHAGDC) operon of Lactobacillus acidophilus by differential display: Gene structure, cloning and characterization
    • Kullen, M. J., and T. R. Klaenhammer. 1999. Identification of the pH-inducible, proton-translocating F1F0-ATPase (atpBEFHAGDC) operon of Lactobacillus acidophilus by differential display: gene structure, cloning and characterization. Mol. Microbiol. 33:1152-1161.
    • (1999) Mol. Microbiol , vol.33 , pp. 1152-1161
    • Kullen, M.J.1    Klaenhammer, T.R.2
  • 23
    • 34249901823 scopus 로고    scopus 로고
    • New insights into the Enterococcus faecalis CroRS two-component system obtained using a differential-display random arbitrarily primed PCR approach
    • Le Breton, Y., C. Muller, Y. Auffray, and A. Rince. 2007. New insights into the Enterococcus faecalis CroRS two-component system obtained using a differential-display random arbitrarily primed PCR approach. Appl. Environ. Microbiol. 73:3738-3741.
    • (2007) Appl. Environ. Microbiol , vol.73 , pp. 3738-3741
    • Le Breton, Y.1    Muller, C.2    Auffray, Y.3    Rince, A.4
  • 24
    • 4644333994 scopus 로고    scopus 로고
    • Discrimination of intact and injured Listeria monocytogenes by Fourier transform infrared spectroscopy and principal component analysis
    • Lin, M., M. Al-Holy, H. Al-Qadiri, D. H. Kang, A. G. Cavinato, Y. Huang, and B. A. Rasco. 2004. Discrimination of intact and injured Listeria monocytogenes by Fourier transform infrared spectroscopy and principal component analysis. J. Agric. Food Chem. 52:5769-5772.
    • (2004) J. Agric. Food Chem , vol.52 , pp. 5769-5772
    • Lin, M.1    Al-Holy, M.2    Al-Qadiri, H.3    Kang, D.H.4    Cavinato, A.G.5    Huang, Y.6    Rasco, B.A.7
  • 26
    • 33645051218 scopus 로고    scopus 로고
    • Transcriptional regulation of fatty acid biosynthesis in Streptococcus pneumoniae
    • Lu, Y. J., and C. O. Rock. 2006. Transcriptional regulation of fatty acid biosynthesis in Streptococcus pneumoniae. Mol. Microbiol. 59:551-566.
    • (2006) Mol. Microbiol , vol.59 , pp. 551-566
    • Lu, Y.J.1    Rock, C.O.2
  • 28
    • 0035024983 scopus 로고    scopus 로고
    • Nagel, A. C., J. T. Fleming, G. S. Sayler, and K. L. Beattie. 2001. Screening for ribosomal-based false positives following prokaryotic mRNA differential display. BioTechniques 30:988-990, 992, 994-996.
    • Nagel, A. C., J. T. Fleming, G. S. Sayler, and K. L. Beattie. 2001. Screening for ribosomal-based false positives following prokaryotic mRNA differential display. BioTechniques 30:988-990, 992, 994-996.
  • 29
    • 0026413442 scopus 로고
    • Microbiological characterizations by FT-IR spectroscopy
    • Naumann, D., D. Helm, and H. Labischinski. 1991. Microbiological characterizations by FT-IR spectroscopy. Nature 351:81-82.
    • (1991) Nature , vol.351 , pp. 81-82
    • Naumann, D.1    Helm, D.2    Labischinski, H.3
  • 30
    • 0347479228 scopus 로고    scopus 로고
    • A continuum of anionic charge: Structures and functions of D-alanyl-teichoic acids in gram-positive bacteria
    • Neuhaus, F. C., and J. Baddiley. 2003. A continuum of anionic charge: structures and functions of D-alanyl-teichoic acids in gram-positive bacteria. Microbiol. Mol. Biol. Rev. 67:686-723.
    • (2003) Microbiol. Mol. Biol. Rev , vol.67 , pp. 686-723
    • Neuhaus, F.C.1    Baddiley, J.2
  • 34
    • 33644965938 scopus 로고    scopus 로고
    • Influence of freeze-thaw stress on the structure and function of microbial communities and denitrifying populations in soil
    • Sharma, S., Z. Szele, R. Schilling, J. C. Munch, and M. Schloter. 2006. Influence of freeze-thaw stress on the structure and function of microbial communities and denitrifying populations in soil. Appl. Environ. Microbiol. 72:2148-2154.
    • (2006) Appl. Environ. Microbiol , vol.72 , pp. 2148-2154
    • Sharma, S.1    Szele, Z.2    Schilling, R.3    Munch, J.C.4    Schloter, M.5
  • 35
    • 0032914582 scopus 로고    scopus 로고
    • Identification of aerobically and anaerobically induced genes in Enterococcus faecalis by random arbitrarily primed PCR
    • Shepard, B. D., and M. S. Gilmore. 1999. Identification of aerobically and anaerobically induced genes in Enterococcus faecalis by random arbitrarily primed PCR. Appl. Environ. Microbiol. 65:1470-1476.
    • (1999) Appl. Environ. Microbiol , vol.65 , pp. 1470-1476
    • Shepard, B.D.1    Gilmore, M.S.2
  • 36
    • 0034880790 scopus 로고    scopus 로고
    • Methods to profile gene expression
    • Stanton, L. W. 2001. Methods to profile gene expression. Trends Cardiovasc. Med. 11:49-54.
    • (2001) Trends Cardiovasc. Med , vol.11 , pp. 49-54
    • Stanton, L.W.1
  • 37
    • 33646774677 scopus 로고    scopus 로고
    • Unravelling the role of the ToxR-like transcriptional regulator WmpR in the marine antifouling bacterium Pseudoalteromonas tunicata
    • Stelzer, S., S. Egan, M. R. Larsen, D. H. Bartlett, and S. Kjelleberg. 2006. Unravelling the role of the ToxR-like transcriptional regulator WmpR in the marine antifouling bacterium Pseudoalteromonas tunicata. Microbiology 152:1385-1394.
    • (2006) Microbiology , vol.152 , pp. 1385-1394
    • Stelzer, S.1    Egan, S.2    Larsen, M.R.3    Bartlett, D.H.4    Kjelleberg, S.5
  • 38
    • 0035172863 scopus 로고    scopus 로고
    • Effect of carbon starvation and proteolytic activity on stationary-phase acid tolerance of Streptococcus mutans
    • Svensater, G., O. Bjornsson, and I. R. Hamilton. 2001. Effect of carbon starvation and proteolytic activity on stationary-phase acid tolerance of Streptococcus mutans. Microbiology 147:2971-2979.
    • (2001) Microbiology , vol.147 , pp. 2971-2979
    • Svensater, G.1    Bjornsson, O.2    Hamilton, I.R.3
  • 41
    • 0027692113 scopus 로고
    • Grouping of oral streptococcal species using Fourier-transform infrared spectroscopy in comparison with classical microbiological identification
    • van der Mei, H. C., D. Naumann, and H. J. Busscher. 1993. Grouping of oral streptococcal species using Fourier-transform infrared spectroscopy in comparison with classical microbiological identification. Arch. Oral Biol. 38:1013-1019.
    • (1993) Arch. Oral Biol , vol.38 , pp. 1013-1019
    • van der Mei, H.C.1    Naumann, D.2    Busscher, H.J.3
  • 42
    • 0025633560 scopus 로고
    • Fingerprinting genomes using PCR with arbitrary primers
    • Welsh, J., and M. McClelland. 1990. Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res. 18:7213-7218.
    • (1990) Nucleic Acids Res , vol.18 , pp. 7213-7218
    • Welsh, J.1    McClelland, M.2
  • 43
    • 0036249521 scopus 로고    scopus 로고
    • Analysis of Streptococcus mutans proteins modulated by culture under acidic conditions
    • Wilkins, J. C., K. A. Homer, and D. Beighton. 2002. Analysis of Streptococcus mutans proteins modulated by culture under acidic conditions. Appl. Environ. Microbiol. 68:2382-2390.
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 2382-2390
    • Wilkins, J.C.1    Homer, K.A.2    Beighton, D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.