메뉴 건너뛰기




Volumn 9, Issue , 2008, Pages

Characterization of expressed sequence tags from a full-length enriched cDNA library of Cryptomeria japonica male strobili

Author keywords

[No Author keywords available]

Indexed keywords

AGAMOUS LIKE 6 PROTEIN; AGAMOUS LIKE PROTEIN; COMPLEMENTARY DNA; DEF LIKE PROTEIN; GGM13 LIKE PROTEIN; GLYOXAL OXIDASE LIKE PROTEIN; MADS DOMAIN PROTEIN; POLLEN ANTIGEN; TM3 LIKE PROTEIN; TM6 LIKE PROTEIN; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG; PLANT ANTIGEN; PLANT RNA;

EID: 54149104298     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-9-383     Document Type: Article
Times cited : (66)

References (68)
  • 1
    • 20444391729 scopus 로고    scopus 로고
    • Molecular genetic analyses of microsporogenesis and microgametogenesis in flowering plants
    • 10.1146/annurev.arplant.55.031903.141717 15862102
    • Ma H Molecular genetic analyses of microsporogenesis and microgametogenesis in flowering plants Annu Rev Plant Biol 2005, 56:393-434. 10.1146/annurev.arplant.55.031903.141717 15862102
    • (2005) Annu Rev Plant Biol , vol.56 , pp. 393-434
    • Ma, H.1
  • 2
    • 0001629044 scopus 로고
    • The tapetum: Its form, function, and possible phylogeny in Embryophyta
    • 10.1007/BF00983304
    • Pacini E Franchi GG Hesse M The tapetum: Its form, function, and possible phylogeny in Embryophyta Plant Syst Evol 1985, 149:155-185. 10.1007/BF00983304
    • (1985) Plant Syst Evol , vol.149 , pp. 155-185
    • Pacini, E.1    Franchi, G.G.2    Hesse, M.3
  • 4
    • 0032758311 scopus 로고    scopus 로고
    • MADS-box genes active in developing pollen cones of Norway spruce (Picea abies) are homologous to the B-class floral homeotic genes in angiosperms
    • 10.1002/(SICI)1520-6408(1999)25:3<253::AID-DVG8>3.0.CO;2-P 10528266
    • Sundström J Carlsbecker A Svensson ME Svenson M Johanson U Theißen G Engström P MADS-box genes active in developing pollen cones of Norway spruce (Picea abies) are homologous to the B-class floral homeotic genes in angiosperms Dev Genet 1999, 25:253-266. 10.1002/(SICI)1520-6408(1999)25:3<253::AID-DVG8>3.0.CO;2-P 10528266
    • (1999) Dev Genet , vol.25 , pp. 253-266
    • Sundström, J.1    Carlsbecker, A.2    Svensson, M.E.3    Svenson, M.4    Johanson, U.5    Theißen, G.6    Engström, P.7
  • 5
    • 0036324269 scopus 로고    scopus 로고
    • Conifer reproductive development involves B-type MADS-box genes with distinct and different activities in male organ primordia
    • Sundström J Engström P Conifer reproductive development involves B-type MADS-box genes with distinct and different activities in male organ primordia Plant J 2002, 31:161-169. 10.1046/ j.1365-313X.2002.01343.x 12121446
    • (2002) Plant J , vol.31 , pp. 161-169
    • Sundström, J.1    Engström, P.2
  • 6
    • 0032170460 scopus 로고    scopus 로고
    • Characterization of an AGAMOUS homologue from the conifer black spruce (Picea mariana) that produces floral homeotic conversions when expressed in Arabidopsis
    • 10.1046/j.1365-313x.1998.00250.x 9778845
    • Rutledge R Regan S Nicolas O Fobert P Côté C Bosnich W Kauffeldt C Sunohara G Séguin A Stewart D Characterization of an AGAMOUS homologue from the conifer black spruce (Picea mariana) that produces floral homeotic conversions when expressed in Arabidopsis Plant J 1998, 15:625-634. 10.1046/j.1365-313x.1998.00250.x 9778845
    • (1998) Plant J , vol.15 , pp. 625-634
    • Rutledge, R.1    Regan, S.2    Nicolas, O.3    Fobert, P.4    Côté, C.5    Bosnich, W.6    Kauffeldt, C.7    Sunohara, G.8    Séguin, A.9    Stewart, D.10
  • 7
    • 0032727298 scopus 로고    scopus 로고
    • A DEF/GLO-like MADS-box gene from a gymnosperm: Pinus radiata contains an ortholog of angiosperm B class floral homeotic genes
    • 10.1002/(SICI)1520-6408(1999)25:3<245::AID-DVG7>3.0.CO;2-N 10528265
    • Mouradov A Hamdorf B Teasdale RD Kim JT Winter K-U Theißen G A DEF/GLO-like MADS-box gene from a gymnosperm: Pinus radiata contains an ortholog of angiosperm B class floral homeotic genes Dev Genet 1999, 25:245-252. 10.1002/(SICI)1520-6408(1999)25:3<245::AID- DVG7>3.0.CO;2-N 10528265
    • (1999) Dev Genet , vol.25 , pp. 245-252
    • Mouradov, A.1    Hamdorf, B.2    Teasdale, R.D.3    Kim, J.T.4    Winter, K.-U.5    Theißen, G.6
  • 8
    • 0345581063 scopus 로고    scopus 로고
    • The DAL10 gene from Norway spruce (Picea abies) belongs to a potentially gymnosperm-specific subclass of MADS-box genes and is specifically active in seed cones and pollen cones
    • 10.1046/j.1525-142X.2003.03060.x 14984037
    • Carlsbecker A Sundström J Tandre K Englund M Kvarnheden A Johanson U Engström P The DAL10 gene from Norway spruce (Picea abies) belongs to a potentially gymnosperm-specific subclass of MADS-box genes and is specifically active in seed cones and pollen cones Evol Dev 2003, 5:551-561. 10.1046/j.1525-142X.2003.03060.x 14984037
    • (2003) Evol Dev , vol.5 , pp. 551-561
    • Carlsbecker, A.1    Sundström, J.2    Tandre, K.3    Englund, M.4    Kvarnheden, A.5    Johanson, U.6    Engström, P.7
  • 9
    • 8444227933 scopus 로고    scopus 로고
    • The MADS-box gene DAL1 is a potential mediator of the juvenile-to-adult transition in Norway spruce (Picea abies)
    • 10.1111/j.1365-313X.2004.02226.x 15500470
    • Carlsbecker A Tandre K Johanson U Englund M Engström P The MADS-box gene DAL1 is a potential mediator of the juvenile-to-adult transition in Norway spruce (Picea abies) Plant J 2004, 40:546-557. 10.1111/ j.1365-313X.2004.02226.x 15500470
    • (2004) Plant J , vol.40 , pp. 546-557
    • Carlsbecker, A.1    Tandre, K.2    Johanson, U.3    Englund, M.4    Engström, P.5
  • 10
    • 0029109360 scopus 로고
    • Conifer homologues to genes that control floral development in angiosperms
    • 10.1007/BF00019179 7865797
    • Tandre K Albert VA Sundås A Engström P Conifer homologues to genes that control floral development in angiosperms Plant Mol Biol 1995, 27:69-78. 10.1007/BF00019179 7865797
    • (1995) Plant Mol Biol , vol.27 , pp. 69-78
    • Tandre, K.1    Albert, V.A.2    Sundås, A.3    Engström, P.4
  • 11
    • 33846818868 scopus 로고    scopus 로고
    • APETALA2 like genes from Picea abies show functional similarities to their Arabidopsis homologues
    • 10.1007/s00425-006-0374-1 16953432
    • Nilsson L Carlsbecker A Sundås-Larsson A Vahala T APETALA2 like genes from Picea abies show functional similarities to their Arabidopsis homologues Planta 2007, 225:589-602. 10.1007/s00425-006-0374-1 16953432
    • (2007) Planta , vol.225 , pp. 589-602
    • Nilsson, L.1    Carlsbecker, A.2    Sundås-Larsson, A.3    Vahala, T.4
  • 12
    • 0032568593 scopus 로고    scopus 로고
    • NEEDLY, a Pinus radiata ortholog of FLORICAULA/LEAFY genes, expressed in both reproductive and vegetative meristems
    • 27861 9601002 10.1073/pnas.95.11.6537
    • Mouradov A Glassick T Hamdorf B Murphy L Fowler B Marla S Teasdale RD NEEDLY, a Pinus radiata ortholog of FLORICAULA/LEAFY genes, expressed in both reproductive and vegetative meristems Proc Natl Acad Sci USA 1998, 95:6537-6542. 27861 9601002 10.1073/pnas.95.11.6537
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 6537-6542
    • Mouradov, A.1    Glassick, T.2    Hamdorf, B.3    Murphy, L.4    Fowler, B.5    Marla, S.6    Teasdale, R.D.7
  • 13
    • 0032212575 scopus 로고    scopus 로고
    • PRFLL - A Pinus radiata homologue of FLORICAULA and LEAFY is expressed in buds containing vegetative shoot and undifferentiated male cone primordia
    • 10.1007/s004250050440 9821691
    • Mellerowicz EJ Horgan K Walden A Coker A Walter C PRFLL - a Pinus radiata homologue of FLORICAULA and LEAFY is expressed in buds containing vegetative shoot and undifferentiated male cone primordia Planta 1998, 206:619-629. 10.1007/s004250050440 9821691
    • (1998) Planta , vol.206 , pp. 619-629
    • Mellerowicz, E.J.1    Horgan, K.2    Walden, A.3    Coker, A.4    Walter, C.5
  • 14
    • 0033402319 scopus 로고    scopus 로고
    • Genes expressed in Pinus radiata male cones include homologs to anther-specific and pathogenesis response genes
    • 59478 10594098 10.1104/pp.121.4.1103
    • Walden AR Walter C Gardner RC Genes expressed in Pinus radiata male cones include homologs to anther-specific and pathogenesis response genes Plant Physiol 1999, 121:1103-1116. 59478 10594098 10.1104/ pp.121.4.1103
    • (1999) Plant Physiol , vol.121 , pp. 1103-1116
    • Walden, A.R.1    Walter, C.2    Gardner, R.C.3
  • 15
    • 0141433318 scopus 로고    scopus 로고
    • Epidemiology of Japanese cedar pollinosis throughout Japan
    • 14533662
    • Okuda M Epidemiology of Japanese cedar pollinosis throughout Japan Ann Allergy Asthma Immunol 2003, 91:288-296. 14533662
    • (2003) Ann Allergy Asthma Immunol , vol.91 , pp. 288-296
    • Okuda, M.1
  • 17
    • 54149102925 scopus 로고    scopus 로고
    • Detection of time and initiating factors on male flower differentiation of Japanese cedar (Cryptomeria japonica)
    • Jin C Nakanishi T Ogasawara H Detection of time and initiating factors on male flower differentiation of Japanese cedar (Cryptomeria japonica) Jpn J Palynol 2004, 50:23-29.
    • (2004) Jpn J Palynol , vol.50 , pp. 23-29
    • Jin, C.1    Nakanishi, T.2    Ogasawara, H.3
  • 18
    • 1042302450 scopus 로고    scopus 로고
    • Analysis of expressed sequence tags derived from developing seed and pollen cones of Cryptomeria japonica
    • 10.1055/s-2003-44690
    • Ujino-Ihara T Taguchi Y Yoshimura K Tsumura Y Analysis of expressed sequence tags derived from developing seed and pollen cones of Cryptomeria japonica Plant Biol 2003, 5:600-607. 10.1055/s-2003-44690
    • (2003) Plant Biol , vol.5 , pp. 600-607
    • Ujino-Ihara, T.1    Taguchi, Y.2    Yoshimura, K.3    Tsumura, Y.4
  • 20
    • 0032170495 scopus 로고    scopus 로고
    • High-efficiency cloning of Arabidopsis full-length cDNA by biotinylated CAP trapper
    • 10.1046/j.1365-313x.1998.00237.x 9778851
    • Seki M Carninci P Nishiyama Y Hayashizaki Y Shinozaki K High-efficiency cloning of Arabidopsis full-length cDNA by biotinylated CAP trapper Plant J 1998, 15:707-720. 10.1046/j.1365-313x.1998.00237.x 9778851
    • (1998) Plant J , vol.15 , pp. 707-720
    • Seki, M.1    Carninci, P.2    Nishiyama, Y.3    Hayashizaki, Y.4    Shinozaki, K.5
  • 21
    • 33947667480 scopus 로고    scopus 로고
    • Identification of plant promoter constituents by analysis of local distribution of short sequences
    • 1832190 17346352 10.1186/1471-2164-8-67
    • Yamamoto Y Ichida H Matsui M Obokata J Sakurai T Satou M Seki M Shinozaki K Abe T Identification of plant promoter constituents by analysis of local distribution of short sequences BMC Genomics 2007, 8:67. 1832190 17346352 10.1186/1471-2164-8-67
    • (2007) BMC Genomics , vol.8 , pp. 67
    • Yamamoto, Y.1    Ichida, H.2    Matsui, M.3    Obokata, J.4    Sakurai, T.5    Satou, M.6    Seki, M.7    Shinozaki, K.8    Abe, T.9
  • 22
    • 34247269658 scopus 로고    scopus 로고
    • Characterization of genes for a pollen allergen, Cry j 2, of Cryptomeria japonica
    • 10.1159/000098225 17192717
    • Futamura N Kusunoki Y Mukai Y Shinohara K Characterization of genes for a pollen allergen, Cry j 2, of Cryptomeria japonica Int Arch Allergy Immunol 2007, 143:59-68. 10.1159/000098225 17192717
    • (2007) Int Arch Allergy Immunol , vol.143 , pp. 59-68
    • Futamura, N.1    Kusunoki, Y.2    Mukai, Y.3    Shinohara, K.4
  • 24
    • 0035825662 scopus 로고    scopus 로고
    • Functional annotation of a full-length mouse cDNA collection
    • The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium 10.1038/35055500 11217851
    • The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium Functional annotation of a full-length mouse cDNA collection Nature 2001, 409:685-690. 10.1038/35055500 11217851
    • (2001) Nature , vol.409 , pp. 685-690
  • 26
    • 27944459324 scopus 로고    scopus 로고
    • Comparative analysis of expressed sequence tags of conifers and angiosperms reveals sequences specifically conserved in conifers
    • 10.1007/s11103-005-2080-y 16307365
    • Ujino-Ihara T Kanamori H Yamane H Taguchi Y Namiki N Mukai Y Yoshimura K Tsumura Y Comparative analysis of expressed sequence tags of conifers and angiosperms reveals sequences specifically conserved in conifers Plant Mol Biol 2005, 59:895-907. 10.1007/s11103-005-2080-y 16307365
    • (2005) Plant Mol Biol , vol.59 , pp. 895-907
    • Ujino-Ihara, T.1    Kanamori, H.2    Yamane, H.3    Taguchi, Y.4    Namiki, N.5    Mukai, Y.6    Yoshimura, K.7    Tsumura, Y.8
  • 29
    • 2442497313 scopus 로고    scopus 로고
    • Genome-wide analysis of spatial gene expression in Arabidopsis flowers
    • 423218 15100403 10.1105/tpc.021741
    • Wellmer F Riechmann JL Alves-Ferreira M Meyerowitz EM Genome-wide analysis of spatial gene expression in Arabidopsis flowers Plant Cell 2004, 16:1314-1326. 423218 15100403 10.1105/tpc.021741
    • (2004) Plant Cell , vol.16 , pp. 1314-1326
    • Wellmer, F.1    Riechmann, J.L.2    Alves-Ferreira, M.3    Meyerowitz, E.M.4
  • 30
    • 17844410215 scopus 로고    scopus 로고
    • Transcriptome analysis of haploid male gametophyte development in Arabidopsis
    • 545776 15535861 10.1186/gb-2004-5-11-r85
    • Honys D Twell D Transcriptome analysis of haploid male gametophyte development in Arabidopsis Genome Biol 2004, 5:R85. 545776 15535861 10.1186/gb-2004-5-11-r85
    • (2004) Genome Biol , vol.5
    • Honys, D.1    Twell, D.2
  • 31
    • 34248380799 scopus 로고    scopus 로고
    • Bioinformatics applied to allergy: Allergen databases, from collecting sequence information to data integration. The Allergome platform as a model
    • 10.1016/j.cellimm.2007.02.012 17434469
    • Mari A Scala E Palazzo P Ridolfi S Zennaro D Carabella G Bioinformatics applied to allergy: Allergen databases, from collecting sequence information to data integration. The Allergome platform as a model Cell Immunol 2006, 244:97-100. 10.1016/j.cellimm.2007.02.012 17434469
    • (2006) Cell Immunol , vol.244 , pp. 97-100
    • Mari, A.1    Scala, E.2    Palazzo, P.3    Ridolfi, S.4    Zennaro, D.5    Carabella, G.6
  • 32
    • 33646907417 scopus 로고    scopus 로고
    • AGRIS and AtRegNet. A platform to link cis-regulatory elements and transcription factors into regulatory networks
    • 1400579 16524982 10.1104/pp.105.072280
    • Palaniswamy SK James S Sun H Lamb RS Davuluri RV Grotewold E AGRIS and AtRegNet. A platform to link cis-regulatory elements and transcription factors into regulatory networks Plant Physiol 2006, 140:818-829. 1400579 16524982 10.1104/pp.105.072280
    • (2006) Plant Physiol , vol.140 , pp. 818-829
    • Palaniswamy, S.K.1    James, S.2    Sun, H.3    Lamb, R.S.4    Davuluri, R.V.5    Grotewold, E.6
  • 33
    • 0034760250 scopus 로고    scopus 로고
    • Flow cytometric determination of genome size in the Taxodiaceae, Cupressaceae sensu stricto and Sciadopityaceae
    • Hizume M Kondo T Shibata F Ishizuka R Flow cytometric determination of genome size in the Taxodiaceae, Cupressaceae sensu stricto and Sciadopityaceae Cytologia 2001, 66:307-311.
    • (2001) Cytologia , vol.66 , pp. 307-311
    • Hizume, M.1    Kondo, T.2    Shibata, F.3    Ishizuka, R.4
  • 34
    • 0032412237 scopus 로고    scopus 로고
    • Nuclear DNA amounts in gymnosperms
    • 10.1006/anbo.1998.0764
    • Murray BG Nuclear DNA amounts in gymnosperms Ann Bot 1998, 82:3-15. 10.1006/anbo.1998.0764
    • (1998) Ann Bot , vol.82 , pp. 3-15
    • Murray, B.G.1
  • 35
    • 0033815222 scopus 로고    scopus 로고
    • Expression analysis of ESTs derived from the inner bark of Cryptomeria japonica
    • 10.1023/A:1006492103063 11052197
    • Ujino-Ihara T Yoshimura K Ugawa Y Yoshimaru H Nagasaka K Tsumura Y Expression analysis of ESTs derived from the inner bark of Cryptomeria japonica Plant Mol Biol 2000, 43:451-457. 10.1023/A:1006492103063 11052197
    • (2000) Plant Mol Biol , vol.43 , pp. 451-457
    • Ujino-Ihara, T.1    Yoshimura, K.2    Ugawa, Y.3    Yoshimaru, H.4    Nagasaka, K.5    Tsumura, Y.6
  • 37
    • 0033228157 scopus 로고    scopus 로고
    • CapSelect: A highly sensitive method for 5′ CAP-dependent enrichment of full-length cDNA in PCR-mediated analysis of mRNAs
    • 148683 10518626 10.1093/nar/27.21.e31
    • Schmidt WM Mueller MW CapSelect: A highly sensitive method for 5′ CAP-dependent enrichment of full-length cDNA in PCR-mediated analysis of mRNAs Nucl Acids Res 1999, 27:e31. 148683 10518626 10.1093/nar/27.21.e31
    • (1999) Nucl Acids Res , vol.27
    • Schmidt, W.M.1    Mueller, M.W.2
  • 38
    • 0038471197 scopus 로고    scopus 로고
    • Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana
    • 165884 12771380 10.1073/pnas.1132171100
    • Kirst M Johnson AF Baucom C Ulrich E Hubbard K Staggs R Paule C Retzel E Whetten R Sederoff R Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana Proc Natl Acad Sci USA 2003, 100:7383-7388. 165884 12771380 10.1073/pnas.1132171100
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 7383-7388
    • Kirst, M.1    Johnson, A.F.2    Baucom, C.3    Ulrich, E.4    Hubbard, K.5    Staggs, R.6    Paule, C.7    Retzel, E.8    Whetten, R.9    Sederoff, R.10
  • 39
    • 0030773907 scopus 로고    scopus 로고
    • Complex gene families in pine genomes
    • 10.1016/S1360-1385(97)84624-9
    • Kinlaw CS Neale DB Complex gene families in pine genomes Trends Plant Sci 1996, 2:356-359. 10.1016/S1360-1385(97)84624-9
    • (1996) Trends Plant Sci , vol.2 , pp. 356-359
    • Kinlaw, C.S.1    Neale, D.B.2
  • 41
    • 1242319335 scopus 로고    scopus 로고
    • Type I MADS-box genes have experienced faster birth-and-death evolution than type II MADS-box genes in angiosperms
    • 357026 14764899 10.1073/pnas.0308430100
    • Nam J Kim J Lee S An G Ma H Nei M Type I MADS-box genes have experienced faster birth-and-death evolution than type II MADS-box genes in angiosperms Proc Natl Acad Sci USA 2004, 101:1910-1915. 357026 14764899 10.1073/pnas.0308430100
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 1910-1915
    • Nam, J.1    Kim, J.2    Lee, S.3    An, G.4    Ma, H.5    Nei, M.6
  • 42
    • 0036276554 scopus 로고    scopus 로고
    • Two ancient classes of MIKC-type MADS-box genes are present in the moss Physcomitrella patens
    • 12032236
    • Henschel K Kofuji R Hasebe M Saedler H Münster T Theißen G Two ancient classes of MIKC-type MADS-box genes are present in the moss Physcomitrella patens Mol Biol Evol 2002, 19:801-814. 12032236
    • (2002) Mol Biol Evol , vol.19 , pp. 801-814
    • Henschel, K.1    Kofuji, R.2    Hasebe, M.3    Saedler, H.4    Münster, T.5    Theißen, G.6
  • 43
    • 0345581665 scopus 로고    scopus 로고
    • The major clades of MADS-box genes and their role in the development and evolution of flowering plants
    • 10.1016/S1055-7903(03)00207-0 14615187
    • Becker A Theißen G The major clades of MADS-box genes and their role in the development and evolution of flowering plants Mol Phylogenet Evol 2003, 29:464-489. 10.1016/S1055-7903(03)00207-0 14615187
    • (2003) Mol Phylogenet Evol , vol.29 , pp. 464-489
    • Becker, A.1    Theißen, G.2
  • 44
    • 33747488490 scopus 로고    scopus 로고
    • AGL80 is required for central cell and endosperm development in Arabidopsis
    • 1533969 16798889 10.1105/tpc.106.040824
    • Portereiko MF Lloyd A Steffen JG Punwani JA Otsuga D Drews GN AGL80 is required for central cell and endosperm development in Arabidopsis Plant Cell 2006, 18:1862-1872. 1533969 16798889 10.1105/tpc.106.040824
    • (2006) Plant Cell , vol.18 , pp. 1862-1872
    • Portereiko, M.F.1    Lloyd, A.2    Steffen, J.G.3    Punwani, J.A.4    Otsuga, D.5    Drews, G.N.6
  • 46
    • 0035715919 scopus 로고    scopus 로고
    • A novel MADS-box gene subfamily with a sister-group relationship to class B floral homeotic genes
    • 10.1007/s00438-001-0615-8 11862488
    • Becker A Kaufmann K Freialdenhoven A Vincent C Li M-A Saedler H Theissen G A novel MADS-box gene subfamily with a sister-group relationship to class B floral homeotic genes Mol Genet Genomics 2002, 266:942-950. 10.1007/s00438-001-0615-8 11862488
    • (2002) Mol Genet Genomics , vol.266 , pp. 942-950
    • Becker, A.1    Kaufmann, K.2    Freialdenhoven, A.3    Vincent, C.4    Li, M.-A.5    Saedler, H.6    Theissen, G.7
  • 47
    • 0036771661 scopus 로고    scopus 로고
    • The TRANSPARENT TESTA16 locus encodes the ARABIDOPSIS BSISTER MADS domain protein and is required for proper development and pigmentation of the seed coat
    • 151229 12368498 10.1105/tpc.004127
    • Nesi N Debeaujon I Jond C Stewart AJ Jenkins GI Caboche M Lepiniec L The TRANSPARENT TESTA16 locus encodes the ARABIDOPSIS BSISTER MADS domain protein and is required for proper development and pigmentation of the seed coat Plant Cell 2002, 14:2463-2479. 151229 12368498 10.1105/ tpc.004127
    • (2002) Plant Cell , vol.14 , pp. 2463-2479
    • Nesi, N.1    Debeaujon, I.2    Jond, C.3    Stewart, A.J.4    Jenkins, G.I.5    Caboche, M.6    Lepiniec, L.7
  • 48
    • 10644238478 scopus 로고    scopus 로고
    • Phylogenetic signal in nucleotide data from seed plants: Implications for resolving the seed plant tree of life
    • 10.3732/ajb.91.10.1599
    • Burleigh JG Mathews S Phylogenetic signal in nucleotide data from seed plants: Implications for resolving the seed plant tree of life Am J Bot 2004, 91:1599-1613. 10.3732/ajb.91.10.1599
    • (2004) Am J Bot , vol.91 , pp. 1599-1613
    • Burleigh, J.G.1    Mathews, S.2
  • 49
    • 0034636037 scopus 로고    scopus 로고
    • Seed plant phylogeny inferred from all three plant genomes: Monophyly of extant gymnosperms and origin of Gnetales from conifers
    • 10760277 10.1073/pnas.97.8.4086
    • Chaw S-M Parkinson CL Cheng Y Vincent TM Palmer JD Seed plant phylogeny inferred from all three plant genomes: Monophyly of extant gymnosperms and origin of Gnetales from conifers PNAS 2000, 97:4086-4091. 18157 10760277 10.1073/pnas.97.8.4086
    • (2000) PNAS , vol.97 , pp. 4086-4091
    • Chaw, S.-M.1    Parkinson, C.L.2    Cheng, Y.3    Vincent, T.M.4    Palmer, J.D.5
  • 50
    • 0142183847 scopus 로고    scopus 로고
    • Evolution and divergence of the MADS-box gene family based on genome-wide expression analyses
    • 10.1093/molbev/msg216 12949148
    • Kofuji R Sumikawa N Yamasaki M Kondo K Ueda K Ito M Hasebe M Evolution and divergence of the MADS-box gene family based on genome-wide expression analyses Mol Biol Evol 2003, 20:1963-1977. 10.1093/molbev/ msg216 12949148
    • (2003) Mol Biol Evol , vol.20 , pp. 1963-1977
    • Kofuji, R.1    Sumikawa, N.2    Yamasaki, M.3    Kondo, K.4    Ueda, K.5    Ito, M.6    Hasebe, M.7
  • 52
    • 51249169259 scopus 로고
    • A simple and efficient method for isolating RNA from pine trees
    • 10.1007/BF02670468
    • Chang S Puryear J Cairney J A simple and efficient method for isolating RNA from pine trees Plant Mol Biol Rep 1993, 11:113-116. 10.1007/ BF02670468
    • (1993) Plant Mol Biol Rep , vol.11 , pp. 113-116
    • Chang, S.1    Puryear, J.2    Cairney, J.3
  • 53
    • 0031905770 scopus 로고    scopus 로고
    • Thermostabilization and thermoactivation of thermolabile enzymes by trehalose and its application for the synthesis of full length cDNA
    • 18452 9435224 10.1073/pnas.95.2.520
    • Carninci P Nishiyama Y Westover A Itoh M Nagaoka S Sasaki N Okazaki Y Muramatsu M Hayashizaki Y Thermostabilization and thermoactivation of thermolabile enzymes by trehalose and its application for the synthesis of full length cDNA Proc Natl Acad Sci USA 1998, 95:520-524. 18452 9435224 10.1073/pnas.95.2.520
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 520-524
    • Carninci, P.1    Nishiyama, Y.2    Westover, A.3    Itoh, M.4    Nagaoka, S.5    Sasaki, N.6    Okazaki, Y.7    Muramatsu, M.8    Hayashizaki, Y.9
  • 54
    • 0033791308 scopus 로고    scopus 로고
    • Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes
    • 310980 11042159 10.1101/gr.145100
    • Carninci P Shibata Y Hayatsu N Sugahara Y Shibata K Itoh M Konno H Okazaki Y Muramatsu M Hayashizaki Y Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes Genome Res 2000, 10:1617-1630. 310980 11042159 10.1101/gr.145100
    • (2000) Genome Res , vol.10 , pp. 1617-1630
    • Carninci, P.1    Shibata, Y.2    Hayatsu, N.3    Sugahara, Y.4    Shibata, K.5    Itoh, M.6    Konno, H.7    Okazaki, Y.8    Muramatsu, M.9    Hayashizaki, Y.10
  • 55
    • 0035417016 scopus 로고    scopus 로고
    • Balanced-size and long-size cloning of full-length, cap-trapped cDNAs into vectors of the novel λ-FLC family allows enhanced gene discovery rate and functional analysis
    • 10.1006/geno.2001.6601 11543636
    • Carninci P Shibata Y Hayatsu N Itoh M Shiraki T Hirozane T Watahiki A Shibata K Konno H Muramatsu M Hayashizaki Y Balanced-size and long-size cloning of full-length, cap-trapped cDNAs into vectors of the novel λ-FLC family allows enhanced gene discovery rate and functional analysis Genomics 2001, 77:79-90. 10.1006/geno.2001.6601 11543636
    • (2001) Genomics , vol.77 , pp. 79-90
    • Carninci, P.1    Shibata, Y.2    Hayatsu, N.3    Itoh, M.4    Shiraki, T.5    Hirozane, T.6    Watahiki, A.7    Shibata, K.8    Konno, H.9    Muramatsu, M.10    Hayashizaki, Y.11
  • 56
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • 9521921
    • Ewing B Hillier L Wendl MC Green P Base-calling of automated sequencer traces using phred. I. Accuracy assessment Genome Res 1998, 8:175-185. 9521921
    • (1998) Genome Res , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 59
    • 0031955116 scopus 로고    scopus 로고
    • Consed: A graphical tool for sequence finishing
    • 9521923
    • Gordon D Abajian C Green P Consed: A graphical tool for sequence finishing Genome Res 1998, 8:195-202. 9521923
    • (1998) Genome Res , vol.8 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 60
    • 13444306641 scopus 로고    scopus 로고
    • NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
    • 539979 15608248 10.1093/nar/gki025
    • Pruitt KD Tatusova T Maglott DR NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins Nucl Acids Res 2005, 33:D501-504. 539979 15608248 10.1093/nar/ gki025
    • (2005) Nucl Acids Res , vol.33
    • Pruitt, K.D.1    Tatusova, T.2    Maglott, D.R.3
  • 61
    • 0037624063 scopus 로고    scopus 로고
    • Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice
    • The Rice Full-Length cDNA Consortium 10.1126/science.1081288 12869764
    • The Rice Full-Length cDNA Consortium Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice Science 2003, 301:376-379. 10.1126/science.1081288 12869764
    • (2003) Science , vol.301 , pp. 376-379
  • 64
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • 308517 7984417 10.1093/nar/22.22.4673
    • Thompson JD Higgins DG Gibson TJ CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 1994, 22:4673-4680. 308517 7984417 10.1093/nar/22.22.4673
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 66
    • 0002367729 scopus 로고    scopus 로고
    • MOLPHY version 2.3: Programs for molecular phylogenetics based on maximum likelihood
    • Adachi J Hasegawa M MOLPHY version 2.3: Programs for molecular phylogenetics based on maximum likelihood Comput Sci Monogr 1996, 28:1-150.
    • (1996) Comput Sci Monogr , vol.28 , pp. 1-150
    • Adachi, J.1    Hasegawa, M.2
  • 67
    • 0026691182 scopus 로고
    • The rapid generation of mutation data matrices from protein sequences
    • 1633570
    • Jones DT Taylor WR Thornton JM The rapid generation of mutation data matrices from protein sequences Comput Appl Biosci 1992, 8:275-282. 1633570
    • (1992) Comput Appl Biosci , vol.8 , pp. 275-282
    • Jones, D.T.1    Taylor, W.R.2    Thornton, J.M.3
  • 68
    • 0028069573 scopus 로고
    • Accuracies of the simple methods for estimating the bootstrap probability of a maximum-likelihood tree
    • Hasegawa M Kishino H Accuracies of the simple methods for estimating the bootstrap probability of a maximum-likelihood tree Mol Biol Evol 1994, 11:142-145.
    • (1994) Mol Biol Evol , vol.11 , pp. 142-145
    • Hasegawa, M.1    Kishino, H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.